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The map label for this gene is arnC [H]

Identifier: 154248473

GI number: 154248473

Start: 5032074

End: 5032820

Strand: Direct

Name: arnC [H]

Synonym: Xaut_4553

Alternate gene names: 154248473

Gene position: 5032074-5032820 (Clockwise)

Preceding gene: 154248472

Following gene: 154248474

Centisome position: 94.79

GC content: 69.34

Gene sequence:

>747_bases
GTGACCTCCCCCATTGCCACTCCGTCCGCAGCCCCCCGGCTGTCGGTGATCATTGCCGTGAAAGATGAGGCGGATAACGT
CCTGCCGCTGATCGACGAGATTGACCGCGCCCTCACCGCCGAGCCGTTCGAGCTGATCTTCGTGGACGACGGTTCCACCG
ACGCCACCCTCGCCAATCTGCGCAAGGCGGCGGCCACGCGGCCCTATCTGCGAATCCTGGTGCACGAAAAATCCTGCGGC
AAGACCGCGGGCGTGGATACCGGCGCCCATGCGGCGCGGGGCGACATCCTGCTGCTCCTCGACGGCGACGGGCAGAACAA
CCCGGCCTACCTGCCCGAGATGGTGCGGGCCATGGACGAAGGCGGCCCGCGCGTCGGCCTGGTGCAGGGCGAGCGGCAGG
GCCGCAAGGACACCCGCTTCAAGCGCTACCAGTCGCGCCTTGCCAACCGCATCCGCGCCGGACTGCTGAAGGACGGCTCG
CGCGACACGGGATGCGGCCTGAAGGCAGTGCGGCGCGACCTGCACCTGCACCTGCCGGTGTTCGACGGCCAGCACCGCTT
CATGGCGGCGCTGGTGCGGCGCGAGGGCTATGAGACCCGCACCGTGAAGGTGGTGGACCGCGAGCGCTGGTCCGGCGTCT
CCAAATACGGCTTCTGGAACCGCTTCGGCGTGGGCATCCTGGATCTGTTCGGCGTGTGGTGGCTGGTGCAGCGCCGGCGC
GTGCCGCACGTGGTGGAGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCGCCATCGCGCCCATGGCGGGTCCATCGGCACGTCGGCTCGGCCGCCTGCTGCCACGCACCGCTTTTAGCTCCGCCGTC
CCAGTCGAAGAGGCGAGACC

Downstream 100 bases:

>100_bases
TGATCTATTACCTCAGCCAGATCGGCGATTACCTGCACGACGTCTTCATCGACCAGTTCGACTGGTGGGTGGTGCTGGGC
CTCGTGGCCCAGATCATGTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTSPIATPSAAPRLSVIIAVKDEADNVLPLIDEIDRALTAEPFELIFVDDGSTDATLANLRKAAATRPYLRILVHEKSCG
KTAGVDTGAHAARGDILLLLDGDGQNNPAYLPEMVRAMDEGGPRVGLVQGERQGRKDTRFKRYQSRLANRIRAGLLKDGS
RDTGCGLKAVRRDLHLHLPVFDGQHRFMAALVRREGYETRTVKVVDRERWSGVSKYGFWNRFGVGILDLFGVWWLVQRRR
VPHVVERG

Sequences:

>Translated_248_residues
MTSPIATPSAAPRLSVIIAVKDEADNVLPLIDEIDRALTAEPFELIFVDDGSTDATLANLRKAAATRPYLRILVHEKSCG
KTAGVDTGAHAARGDILLLLDGDGQNNPAYLPEMVRAMDEGGPRVGLVQGERQGRKDTRFKRYQSRLANRIRAGLLKDGS
RDTGCGLKAVRRDLHLHLPVFDGQHRFMAALVRREGYETRTVKVVDRERWSGVSKYGFWNRFGVGILDLFGVWWLVQRRR
VPHVVERG
>Mature_247_residues
TSPIATPSAAPRLSVIIAVKDEADNVLPLIDEIDRALTAEPFELIFVDDGSTDATLANLRKAAATRPYLRILVHEKSCGK
TAGVDTGAHAARGDILLLLDGDGQNNPAYLPEMVRAMDEGGPRVGLVQGERQGRKDTRFKRYQSRLANRIRAGLLKDGSR
DTGCGLKAVRRDLHLHLPVFDGQHRFMAALVRREGYETRTVKVVDRERWSGVSKYGFWNRFGVGILDLFGVWWLVQRRRV
PHVVERG

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=219, Percent_Identity=29.6803652968037, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787259, Length=149, Percent_Identity=34.8993288590604, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788692, Length=219, Percent_Identity=22.3744292237443, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27635; Mature: 27504

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPIATPSAAPRLSVIIAVKDEADNVLPLIDEIDRALTAEPFELIFVDDGSTDATLANL
CCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
RKAAATRPYLRILVHEKSCGKTAGVDTGAHAARGDILLLLDGDGQNNPAYLPEMVRAMDE
HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHC
GGPRVGLVQGERQGRKDTRFKRYQSRLANRIRAGLLKDGSRDTGCGLKAVRRDLHLHLPV
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEEE
FDGQHRFMAALVRREGYETRTVKVVDRERWSGVSKYGFWNRFGVGILDLFGVWWLVQRRR
ECCCHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
VPHVVERG
CCHHHCCC
>Mature Secondary Structure 
TSPIATPSAAPRLSVIIAVKDEADNVLPLIDEIDRALTAEPFELIFVDDGSTDATLANL
CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
RKAAATRPYLRILVHEKSCGKTAGVDTGAHAARGDILLLLDGDGQNNPAYLPEMVRAMDE
HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHC
GGPRVGLVQGERQGRKDTRFKRYQSRLANRIRAGLLKDGSRDTGCGLKAVRRDLHLHLPV
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEEE
FDGQHRFMAALVRREGYETRTVKVVDRERWSGVSKYGFWNRFGVGILDLFGVWWLVQRRR
ECCCHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
VPHVVERG
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA