| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is arnT [H]
Identifier: 154248471
GI number: 154248471
Start: 5029418
End: 5031151
Strand: Direct
Name: arnT [H]
Synonym: Xaut_4551
Alternate gene names: 154248471
Gene position: 5029418-5031151 (Clockwise)
Preceding gene: 154248470
Following gene: 154248472
Centisome position: 94.73
GC content: 69.26
Gene sequence:
>1734_bases ATGGCCATCTCAGAGCCCGCGTCCAACACGCGCCGGGCGTTCGACCTCGACCTGCCCCGGCGCCTCGTGCGCCTCCTGGA CGGTGCCTCGGCGCGCCATGGCCGCGCCAGCCTGCTGCTCGTGGCCGTGGCGCTGCTCGCCTTCCTGCCCGGCTTCTTCC AGCTCTCCCCCATCGACCGCGACGAGGCCCGCTTCGCACAGGCCACCAAGCAGATGCTGGAGAGCGGCAATTATGTGGAC ATCCGCTTCCACACCCAGGCGCGCCACAAGAAGCCGGTGGGCATCTACTGGCTCCAGGCCGCGACGGTCCGGGCCGGCGA GGCGGTCATCGGCCCCTCCGCGCTTTATTCCATCTGGCTTTATCGCCTGCCGTCCCTGTTCGCCGCCATCGGCGCGGTGC TGCTCACCTATTGGACGGCGCTCGCCTTCGTCACCCGCCGGGGGGCGCTGCTCGCCGGCCTGATGATGGCCGGTTGCGTG CTACTGGGGGTGGAGGCGCGACTCGCCAAGACCGACGCGGTGCTGCTCTTCACCATCATCGCCTCCTTCGGCGCGCTGGC GCGGGCCTACATGCGCCCGGCCACCGAGCGCGCGGGCGACCTGAAGCTTGCCGCCATCTTCTGGACGGGCCTTGCCGCCG GTATCCTGATCAAGGGGCCCATGGCGCCCCTGTTCGTGGGGCTGCCCATCCTGGCGCTGGCGATCGTGGAGCGCTCGGGC GGGTTCCTGAAACCGCTCAAGCCGCTTATGGGCCTCGCATGGTGCGCCCTGCTGGTGCTGCCCTGGTTCGTCGCCATCTA TTTCGTCACCAACGGTGCCTTCTACCAGCACGCCGTGGGCGTGGACATGCTGGGCAAGGTGGCCGAAGGGGCAGAGGGGC ACTGGGGTCCGCCGGGCACCTATTTCCTTGCCGCCTGGGGCACCTTCTGGCCGTCGGTGGTGCTGGTCGCCATGGCCGCG CCCTTCGCCTGGCGCGCCCGGCGCGAGGAGAAGGTGCGCTTCCTGCTGTGCTGGCTGGTGCCCACCTGGCTGGTGTTCGA GATCGCCGTCACCAAGCTTCCCCATTATGTGCTGCCGCTCTATCCGGCGCTTGCCATCCTCACCGCGCTGGCGGTGGAGC GGGGCGCCATGGCCAAGGCGGGCAGCCGGCTCGCCGGCCTGGTGTGGATCTGGCCGGTGCTCGCCATCGTGCTGTCGCTC GGGCTCGGGGCGGCCTATCTGTGGTTCGGCAGCGGCTTCGGCCTTGCGGCGTGGCCGCTGCTCGCCCTCGCCATCGTGCT GCTGTGGAGCGCGGCGCGCGCCTTCCCGCGGGTGGGCGTGGAGGGAGCGTTCCTCACCGCGCTGGTGGGAACGCTGGTGC TGTTCTTCGCCATCTATCAGGTGATGCTGCCGCAGATGCGGGCGCTGTGGATCTCCGAGCGCCTCGCCCAGGTGGCGCGG GACGAAGGCTGCCCGGCGGAGAAGATCGCCTCCTTCCCCTATCAGGAGCCGAGCCTCGTCTTCCTGGTCGGCACCAAGAT CAACTACATCCTGCCTGACGCGGCGGCAGTGCTGCTGAAGCAGGGCGGCTGCTCCCTCGCCTTCATCGATACCCGCTTCC ACACCTGGTTCGAGACCAAGGCCACCGAGATCGGCCTGAAATATCACGCCGTCGCCACCCTTTCCGGCTTCACCTACAAT GGCGGGCGGCAGGTGGCGATCACCGTCTACCGTTCCGACGAGGCCGCCCCGTGA
Upstream 100 bases:
>100_bases CCCCCGGGGAAAGGCGCGCCGCGCGCCGATTGCCCGGCCCTTTTCGGCACGGGCGTTTCTGCTATTGTCCGCGCCGATTT CAGCGGATCCAGACAGAAGC
Downstream 100 bases:
>100_bases CGGCAGAGGCCGCGCCCGGCGTGCCCCCGTCCCGTCCCGGCACCGCGCCTGTCATCCTGCGGCAGGTGGGGGAAGGCGCG CGGCTGCTGCTGGTCTCCAT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MAISEPASNTRRAFDLDLPRRLVRLLDGASARHGRASLLLVAVALLAFLPGFFQLSPIDRDEARFAQATKQMLESGNYVD IRFHTQARHKKPVGIYWLQAATVRAGEAVIGPSALYSIWLYRLPSLFAAIGAVLLTYWTALAFVTRRGALLAGLMMAGCV LLGVEARLAKTDAVLLFTIIASFGALARAYMRPATERAGDLKLAAIFWTGLAAGILIKGPMAPLFVGLPILALAIVERSG GFLKPLKPLMGLAWCALLVLPWFVAIYFVTNGAFYQHAVGVDMLGKVAEGAEGHWGPPGTYFLAAWGTFWPSVVLVAMAA PFAWRARREEKVRFLLCWLVPTWLVFEIAVTKLPHYVLPLYPALAILTALAVERGAMAKAGSRLAGLVWIWPVLAIVLSL GLGAAYLWFGSGFGLAAWPLLALAIVLLWSAARAFPRVGVEGAFLTALVGTLVLFFAIYQVMLPQMRALWISERLAQVAR DEGCPAEKIASFPYQEPSLVFLVGTKINYILPDAAAVLLKQGGCSLAFIDTRFHTWFETKATEIGLKYHAVATLSGFTYN GGRQVAITVYRSDEAAP
Sequences:
>Translated_577_residues MAISEPASNTRRAFDLDLPRRLVRLLDGASARHGRASLLLVAVALLAFLPGFFQLSPIDRDEARFAQATKQMLESGNYVD IRFHTQARHKKPVGIYWLQAATVRAGEAVIGPSALYSIWLYRLPSLFAAIGAVLLTYWTALAFVTRRGALLAGLMMAGCV LLGVEARLAKTDAVLLFTIIASFGALARAYMRPATERAGDLKLAAIFWTGLAAGILIKGPMAPLFVGLPILALAIVERSG GFLKPLKPLMGLAWCALLVLPWFVAIYFVTNGAFYQHAVGVDMLGKVAEGAEGHWGPPGTYFLAAWGTFWPSVVLVAMAA PFAWRARREEKVRFLLCWLVPTWLVFEIAVTKLPHYVLPLYPALAILTALAVERGAMAKAGSRLAGLVWIWPVLAIVLSL GLGAAYLWFGSGFGLAAWPLLALAIVLLWSAARAFPRVGVEGAFLTALVGTLVLFFAIYQVMLPQMRALWISERLAQVAR DEGCPAEKIASFPYQEPSLVFLVGTKINYILPDAAAVLLKQGGCSLAFIDTRFHTWFETKATEIGLKYHAVATLSGFTYN GGRQVAITVYRSDEAAP >Mature_576_residues AISEPASNTRRAFDLDLPRRLVRLLDGASARHGRASLLLVAVALLAFLPGFFQLSPIDRDEARFAQATKQMLESGNYVDI RFHTQARHKKPVGIYWLQAATVRAGEAVIGPSALYSIWLYRLPSLFAAIGAVLLTYWTALAFVTRRGALLAGLMMAGCVL LGVEARLAKTDAVLLFTIIASFGALARAYMRPATERAGDLKLAAIFWTGLAAGILIKGPMAPLFVGLPILALAIVERSGG FLKPLKPLMGLAWCALLVLPWFVAIYFVTNGAFYQHAVGVDMLGKVAEGAEGHWGPPGTYFLAAWGTFWPSVVLVAMAAP FAWRARREEKVRFLLCWLVPTWLVFEIAVTKLPHYVLPLYPALAILTALAVERGAMAKAGSRLAGLVWIWPVLAIVLSLG LGAAYLWFGSGFGLAAWPLLALAIVLLWSAARAFPRVGVEGAFLTALVGTLVLFFAIYQVMLPQMRALWISERLAQVARD EGCPAEKIASFPYQEPSLVFLVGTKINYILPDAAAVLLKQGGCSLAFIDTRFHTWFETKATEIGLKYHAVATLSGFTYNG GRQVAITVYRSDEAAP
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=344, Percent_Identity=24.7093023255814, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 62709; Mature: 62578
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISEPASNTRRAFDLDLPRRLVRLLDGASARHGRASLLLVAVALLAFLPGFFQLSPIDR CCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC DEARFAQATKQMLESGNYVDIRFHTQARHKKPVGIYWLQAATVRAGEAVIGPSALYSIWL HHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHH YRLPSLFAAIGAVLLTYWTALAFVTRRGALLAGLMMAGCVLLGVEARLAKTDAVLLFTII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ASFGALARAYMRPATERAGDLKLAAIFWTGLAAGILIKGPMAPLFVGLPILALAIVERSG HHHHHHHHHHHCCHHHCCCCEEHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCC GFLKPLKPLMGLAWCALLVLPWFVAIYFVTNGAFYQHAVGVDMLGKVAEGAEGHWGPPGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHCCCCCCCCCCCC YFLAAWGTFWPSVVLVAMAAPFAWRARREEKVRFLLCWLVPTWLVFEIAVTKLPHYVLPL EEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YPALAILTALAVERGAMAKAGSRLAGLVWIWPVLAIVLSLGLGAAYLWFGSGFGLAAWPL HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHH LALAIVLLWSAARAFPRVGVEGAFLTALVGTLVLFFAIYQVMLPQMRALWISERLAQVAR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEGCPAEKIASFPYQEPSLVFLVGTKINYILPDAAAVLLKQGGCSLAFIDTRFHTWFETK CCCCCHHHHHCCCCCCCCEEEEEECCEEEECCHHHHHHHHCCCCEEEEEECHHHHHHHHH ATEIGLKYHAVATLSGFTYNGGRQVAITVYRSDEAAP HHHHCCEEEEEEEECCEEECCCCEEEEEEEECCCCCC >Mature Secondary Structure AISEPASNTRRAFDLDLPRRLVRLLDGASARHGRASLLLVAVALLAFLPGFFQLSPIDR CCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC DEARFAQATKQMLESGNYVDIRFHTQARHKKPVGIYWLQAATVRAGEAVIGPSALYSIWL HHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHH YRLPSLFAAIGAVLLTYWTALAFVTRRGALLAGLMMAGCVLLGVEARLAKTDAVLLFTII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ASFGALARAYMRPATERAGDLKLAAIFWTGLAAGILIKGPMAPLFVGLPILALAIVERSG HHHHHHHHHHHCCHHHCCCCEEHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCC GFLKPLKPLMGLAWCALLVLPWFVAIYFVTNGAFYQHAVGVDMLGKVAEGAEGHWGPPGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHCCCCCCCCCCCC YFLAAWGTFWPSVVLVAMAAPFAWRARREEKVRFLLCWLVPTWLVFEIAVTKLPHYVLPL EEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YPALAILTALAVERGAMAKAGSRLAGLVWIWPVLAIVLSLGLGAAYLWFGSGFGLAAWPL HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHH LALAIVLLWSAARAFPRVGVEGAFLTALVGTLVLFFAIYQVMLPQMRALWISERLAQVAR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEGCPAEKIASFPYQEPSLVFLVGTKINYILPDAAAVLLKQGGCSLAFIDTRFHTWFETK CCCCCHHHHHCCCCCCCCEEEEEECCEEEECCHHHHHHHHCCCCEEEEEECHHHHHHHHH ATEIGLKYHAVATLSGFTYNGGRQVAITVYRSDEAAP HHHHCCEEEEEEEECCEEECCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA