| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is crtZ [H]
Identifier: 154248455
GI number: 154248455
Start: 5011851
End: 5012357
Strand: Direct
Name: crtZ [H]
Synonym: Xaut_4535
Alternate gene names: 154248455
Gene position: 5011851-5012357 (Clockwise)
Preceding gene: 154248452
Following gene: 154248459
Centisome position: 94.4
GC content: 65.29
Gene sequence:
>507_bases ATGTCCACCAGCCTCGCCTTCCTCGTCAACGCGCTCATCGTGATCGCCACGGTCGCCGCCATGGAAGGGGTGGCCTGGGC CGCGCACAAATATGTCATGCACGGCTTCGGCTGGGGCTGGCACAAGTCCCACCACGAGCCGCGCGAGGGCGTGTTCGAGC GCAACGACCTTTATGCGCTGCTGTTCGCAGGCATCGCCATCGCCCTCATCTACGCGTTCCGCAATGGCGGCGCGCTGCTG TGGGTGGGCGTGGGGATGACGGTCTACGGCTTCCTTTATTTCTTCGTGCACGACGGCATCACCCACCAGCGCTGGCCGTT CCGCTACGTGCCGCGCAACGGCTATCTCAAGCGCCTGGTGCAGGCCCACCGGCTGCACCATGCGGTGGATGGCAAGGAGG GCTGCGTCTCCTTCGGCTTCATCTATGCCCCGCCGCCTGCCGACCTGAAGGCCAAGCTGAAGAAGCTGCACGGCGGCAGC CTGAAGCAGAACGAGGCGGCGGAATAG
Upstream 100 bases:
>100_bases ATTGATCTGCCACAGGGCGCGGCGGGCCGGCCGATGCTGTATATCCAGCCTGCCGCCGGGCGCGCATATGCCCCCGCGGG CCGCAGCCGATGGGAACCTC
Downstream 100 bases:
>100_bases GCGCCTTCGCCCGCTTCCAATTTCGAGCACCATCCCCCGGAAACGAAAAGAGGCGGCCGAAGCCGCCTCTTTCTTTTTGT CTCAGCCGGTTGGGCGCTCA
Product: carotene hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSTSLAFLVNALIVIATVAAMEGVAWAAHKYVMHGFGWGWHKSHHEPREGVFERNDLYALLFAGIAIALIYAFRNGGALL WVGVGMTVYGFLYFFVHDGITHQRWPFRYVPRNGYLKRLVQAHRLHHAVDGKEGCVSFGFIYAPPPADLKAKLKKLHGGS LKQNEAAE
Sequences:
>Translated_168_residues MSTSLAFLVNALIVIATVAAMEGVAWAAHKYVMHGFGWGWHKSHHEPREGVFERNDLYALLFAGIAIALIYAFRNGGALL WVGVGMTVYGFLYFFVHDGITHQRWPFRYVPRNGYLKRLVQAHRLHHAVDGKEGCVSFGFIYAPPPADLKAKLKKLHGGS LKQNEAAE >Mature_167_residues STSLAFLVNALIVIATVAAMEGVAWAAHKYVMHGFGWGWHKSHHEPREGVFERNDLYALLFAGIAIALIYAFRNGGALLW VGVGMTVYGFLYFFVHDGITHQRWPFRYVPRNGYLKRLVQAHRLHHAVDGKEGCVSFGFIYAPPPADLKAKLKKLHGGSL KQNEAAE
Specific function: Catalyzes the hydroxylation reaction from beta-carotene to zeaxanthin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sterol desaturase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006694 [H]
Pfam domain/function: PF04116 FA_hydroxylase [H]
EC number: NA
Molecular weight: Translated: 18778; Mature: 18647
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLAFLVNALIVIATVAAMEGVAWAAHKYVMHGFGWGWHKSHHEPREGVFERNDLYAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH LFAGIAIALIYAFRNGGALLWVGVGMTVYGFLYFFVHDGITHQRWPFRYVPRNGYLKRLV HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHH QAHRLHHAVDGKEGCVSFGFIYAPPPADLKAKLKKLHGGSLKQNEAAE HHHHHHHHCCCCCCCEEECEEECCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure STSLAFLVNALIVIATVAAMEGVAWAAHKYVMHGFGWGWHKSHHEPREGVFERNDLYAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHH LFAGIAIALIYAFRNGGALLWVGVGMTVYGFLYFFVHDGITHQRWPFRYVPRNGYLKRLV HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHH QAHRLHHAVDGKEGCVSFGFIYAPPPADLKAKLKKLHGGSLKQNEAAE HHHHHHHHCCCCCCCEEECEEECCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8422926; 7808389 [H]