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The map label for this gene is 154248445

Identifier: 154248445

GI number: 154248445

Start: 5004334

End: 5006304

Strand: Reverse

Name: 154248445

Synonym: Xaut_4525

Alternate gene names: NA

Gene position: 5006304-5004334 (Counterclockwise)

Preceding gene: 154248446

Following gene: 154248444

Centisome position: 94.3

GC content: 69.1

Gene sequence:

>1971_bases
ATGCGTGAATGGTGGACCGCCGCGGAATTCGCCGACCTTGGCCTGCCGGATGTGCCGACCGCCAAGAAGGCTGTTTTGGC
CATGATCGAGCGCGTCGGCGGCAATGCGCCGGACCGGCAGTTCACCACCGAGAACCCGCTCGGCATCTGGCGGCGGCGGC
AGGGCCGCGGCGGCGGGCGCGAATATCGCATGGACGTGCTGCCGGGGGCGGCCAAGGCGGCGCTGGCGCTGCGGCTCAAG
CGGGCGGCGGCGCCGGAAACGCCACAGGAGGCGGAGGGCGCGGCTCTGGCGTTACGCGATTCCGCCGAACTGTGGGCGTG
GTTCGATGCCTTGCCGCAGAAGCGCAAGGACGAGGCGAAGCGGCGCCTCGACGCCCTGCTCGCCGTCGAGGAGCTGCAGA
AGGCGGGGCGCCCGCGCGACCACGCGCTGATGGACATGGCAAGCCGGATCGATGTGTCGCTGCGCACGCTCTACGGCTGG
AGCCACCTGGTGGGCGGGCTCGATCGCGCCGACTGGCTTCCGGCGCTGGCGCCGCGCCACATCGGCCGGGTCGCGGAGGC
CGAGATCCCGGCCGAGATGTGGGCCACGTTCGTCTCCGACTACCTGCGCGACAGCAAGCCGACCATCGCCGCCTGCTTCC
GCCGCACCGAGAGTGCCGCTCAGGCCGCAGGCCTCGCCATTCCATCCATGAAGACGTTTCAGAGGAGGGTCGAAGCCATG
CCTAAAACCACAGTCGTACTGGCGCGCGAGGGTGTCGACGGGCTGAAGAAGCTCTATCCCGCGCAGGAGCGCGACCGCAG
CAGCTTCCATGCCCTGGAAGCAGTCAACGCCGACGGGCACGTGTGGGACGTGTTCGTCAAATGGCTCGACGGCACTGTCT
CTCGCCCGGTGCTGATCGGGTTCCAGGACCTCTATTCCGGCATGATCCTGTCGTGGCGTATCGCCCGGACGTCGGATGCG
GCCACCGTGCTGCTGGCGTTCGGCGACCTCGTGGAAACCTACGGCATCCCCGAGCATTGCTGGCTCGACAACGGCCGCGA
GTTCGCCTCGAAGTGGTTCACCGGCCGCCAGGCCAACCGCTACCGCTTCAAGGTAAAGGAAGAAGACCCGGCCGGCGTCC
TGACCCAGCTCGGCGTCCAGGTGCATTGGACCAAGCCATACTCCGGCCAGTCGAAGCCCATCGAGCGCGCATGGCGGGAC
TTCGCGGGCGAGATCGCCAAGCACCCGGCGTTCGACGGCGCCTATGCCGGCAACAGCCCGGACGCCAAGCCCGAGAGCTA
CGGCTCGAAGGCGGTGCCGATCGAGACCTTCGAGAAGGTGGTGGCGGCGGAGATCGCCGCGCACAACGCCCGCGCGGGGC
GGCGGAGCTCCGTCTGCGGCGGCCGGCTCTCCTTCCAGCAGGCGTTCGCCGCCTCCTATGCCGATGCCATCATCCGCAAG
GCCGCGCCGGCGCAGAGCCGCCTTTGGCTACTCGCCTGCGAGGGCGTGAAGGTTCGCTCCGATGCCTCGGTTCACCTCGA
AGGCAATCGCTACTGGGACGAAAAGCTTACCGACATGGTCGGGCACAAGGTGATCCTGCGGTTCGATCCCGCCGACCTGC
ATGCCGGCGTGTGCGTGTACCGGCTCGACGGCGCGCATGTGGTCGATGCGCCGGCGATCGATAAATCCGGCTTCAGGGAT
GTTGCCGAGGCGAGCGCCCACGGCCGGGCGCGAGGCGCCTTCCTGAAGGCGCAGCGCACCTTGCTCGATGCGGTGCGCAC
CATGTCGCCGGACGAAGTCGCGGCGATGTCGATGCAGGCGGAAGTGCCGGAGGCGCTGCCGGAGCCGCGGGCGATCCGGC
CCATTTTCGGCGGCGCGGCCGCTCTGGCGCTGCAGCTGGAGCGCGAACCCGATCAGGACGTCGAGCCCGATGCCTTTTCG
CGCGGCGTGGGCCGGCTGCGCCTCGTGACCAACAACGCCGCGGACGACTGA

Upstream 100 bases:

>100_bases
TGCCGGCCATCGCCCTCGCCGAGCGCATGGAGCGCCGCGCCAAGCTGGACCGCGAGATCGACGCGGACCGCAACGTCCTC
CGGAAGAACGGTGTCCTGTG

Downstream 100 bases:

>100_bases
ACCTCGTCCGCGGCGCCATGGAGCGCGGCCTGGAACGGGGCCGCAGATCAGCAACAGGAGATGCCTATCATGATCGACGA
AACGGCGGAAGGAACCGAGC

Product: Mu DNA binding I gamma subdomain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MREWWTAAEFADLGLPDVPTAKKAVLAMIERVGGNAPDRQFTTENPLGIWRRRQGRGGGREYRMDVLPGAAKAALALRLK
RAAAPETPQEAEGAALALRDSAELWAWFDALPQKRKDEAKRRLDALLAVEELQKAGRPRDHALMDMASRIDVSLRTLYGW
SHLVGGLDRADWLPALAPRHIGRVAEAEIPAEMWATFVSDYLRDSKPTIAACFRRTESAAQAAGLAIPSMKTFQRRVEAM
PKTTVVLAREGVDGLKKLYPAQERDRSSFHALEAVNADGHVWDVFVKWLDGTVSRPVLIGFQDLYSGMILSWRIARTSDA
ATVLLAFGDLVETYGIPEHCWLDNGREFASKWFTGRQANRYRFKVKEEDPAGVLTQLGVQVHWTKPYSGQSKPIERAWRD
FAGEIAKHPAFDGAYAGNSPDAKPESYGSKAVPIETFEKVVAAEIAAHNARAGRRSSVCGGRLSFQQAFAASYADAIIRK
AAPAQSRLWLLACEGVKVRSDASVHLEGNRYWDEKLTDMVGHKVILRFDPADLHAGVCVYRLDGAHVVDAPAIDKSGFRD
VAEASAHGRARGAFLKAQRTLLDAVRTMSPDEVAAMSMQAEVPEALPEPRAIRPIFGGAAALALQLEREPDQDVEPDAFS
RGVGRLRLVTNNAADD

Sequences:

>Translated_656_residues
MREWWTAAEFADLGLPDVPTAKKAVLAMIERVGGNAPDRQFTTENPLGIWRRRQGRGGGREYRMDVLPGAAKAALALRLK
RAAAPETPQEAEGAALALRDSAELWAWFDALPQKRKDEAKRRLDALLAVEELQKAGRPRDHALMDMASRIDVSLRTLYGW
SHLVGGLDRADWLPALAPRHIGRVAEAEIPAEMWATFVSDYLRDSKPTIAACFRRTESAAQAAGLAIPSMKTFQRRVEAM
PKTTVVLAREGVDGLKKLYPAQERDRSSFHALEAVNADGHVWDVFVKWLDGTVSRPVLIGFQDLYSGMILSWRIARTSDA
ATVLLAFGDLVETYGIPEHCWLDNGREFASKWFTGRQANRYRFKVKEEDPAGVLTQLGVQVHWTKPYSGQSKPIERAWRD
FAGEIAKHPAFDGAYAGNSPDAKPESYGSKAVPIETFEKVVAAEIAAHNARAGRRSSVCGGRLSFQQAFAASYADAIIRK
AAPAQSRLWLLACEGVKVRSDASVHLEGNRYWDEKLTDMVGHKVILRFDPADLHAGVCVYRLDGAHVVDAPAIDKSGFRD
VAEASAHGRARGAFLKAQRTLLDAVRTMSPDEVAAMSMQAEVPEALPEPRAIRPIFGGAAALALQLEREPDQDVEPDAFS
RGVGRLRLVTNNAADD
>Mature_656_residues
MREWWTAAEFADLGLPDVPTAKKAVLAMIERVGGNAPDRQFTTENPLGIWRRRQGRGGGREYRMDVLPGAAKAALALRLK
RAAAPETPQEAEGAALALRDSAELWAWFDALPQKRKDEAKRRLDALLAVEELQKAGRPRDHALMDMASRIDVSLRTLYGW
SHLVGGLDRADWLPALAPRHIGRVAEAEIPAEMWATFVSDYLRDSKPTIAACFRRTESAAQAAGLAIPSMKTFQRRVEAM
PKTTVVLAREGVDGLKKLYPAQERDRSSFHALEAVNADGHVWDVFVKWLDGTVSRPVLIGFQDLYSGMILSWRIARTSDA
ATVLLAFGDLVETYGIPEHCWLDNGREFASKWFTGRQANRYRFKVKEEDPAGVLTQLGVQVHWTKPYSGQSKPIERAWRD
FAGEIAKHPAFDGAYAGNSPDAKPESYGSKAVPIETFEKVVAAEIAAHNARAGRRSSVCGGRLSFQQAFAASYADAIIRK
AAPAQSRLWLLACEGVKVRSDASVHLEGNRYWDEKLTDMVGHKVILRFDPADLHAGVCVYRLDGAHVVDAPAIDKSGFRD
VAEASAHGRARGAFLKAQRTLLDAVRTMSPDEVAAMSMQAEVPEALPEPRAIRPIFGGAAALALQLEREPDQDVEPDAFS
RGVGRLRLVTNNAADD

Specific function: This transposase is essential for integration, replication-transposition, and excision of Mu-like viral DNA [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein A [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015126
- InterPro:   IPR003314
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR004189
- InterPro:   IPR009004
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF02316 Mu_DNA_bind; PF09039 Mu_I-gamma; PF02914 Mu_transposase [H]

EC number: NA

Molecular weight: Translated: 72185; Mature: 72185

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREWWTAAEFADLGLPDVPTAKKAVLAMIERVGGNAPDRQFTTENPLGIWRRRQGRGGGR
CCCHHCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCC
EYRMDVLPGAAKAALALRLKRAAAPETPQEAEGAALALRDSAELWAWFDALPQKRKDEAK
EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCHHHHHHHH
RRLDALLAVEELQKAGRPRDHALMDMASRIDVSLRTLYGWSHLVGGLDRADWLPALAPRH
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHCCHHHCHHH
IGRVAEAEIPAEMWATFVSDYLRDSKPTIAACFRRTESAAQAAGLAIPSMKTFQRRVEAM
HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
PKTTVVLAREGVDGLKKLYPAQERDRSSFHALEAVNADGHVWDVFVKWLDGTVSRPVLIG
CCEEEEEECCCHHHHHHHCCCCHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEE
FQDLYSGMILSWRIARTSDAATVLLAFGDLVETYGIPEHCWLDNGREFASKWFTGRQANR
HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHCCCCCCC
YRFKVKEEDPAGVLTQLGVQVHWTKPYSGQSKPIERAWRDFAGEIAKHPAFDGAYAGNSP
EEEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DAKPESYGSKAVPIETFEKVVAAEIAAHNARAGRRSSVCGGRLSFQQAFAASYADAIIRK
CCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAPAQSRLWLLACEGVKVRSDASVHLEGNRYWDEKLTDMVGHKVILRFDPADLHAGVCVY
CCCCCCCEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEE
RLDGAHVVDAPAIDKSGFRDVAEASAHGRARGAFLKAQRTLLDAVRTMSPDEVAAMSMQA
EECCCEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EVPEALPEPRAIRPIFGGAAALALQLEREPDQDVEPDAFSRGVGRLRLVTNNAADD
HCHHHCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure
MREWWTAAEFADLGLPDVPTAKKAVLAMIERVGGNAPDRQFTTENPLGIWRRRQGRGGGR
CCCHHCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCC
EYRMDVLPGAAKAALALRLKRAAAPETPQEAEGAALALRDSAELWAWFDALPQKRKDEAK
EEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCHHHHHHHH
RRLDALLAVEELQKAGRPRDHALMDMASRIDVSLRTLYGWSHLVGGLDRADWLPALAPRH
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHCCHHHCHHH
IGRVAEAEIPAEMWATFVSDYLRDSKPTIAACFRRTESAAQAAGLAIPSMKTFQRRVEAM
HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
PKTTVVLAREGVDGLKKLYPAQERDRSSFHALEAVNADGHVWDVFVKWLDGTVSRPVLIG
CCEEEEEECCCHHHHHHHCCCCHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEE
FQDLYSGMILSWRIARTSDAATVLLAFGDLVETYGIPEHCWLDNGREFASKWFTGRQANR
HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHCCCCCCC
YRFKVKEEDPAGVLTQLGVQVHWTKPYSGQSKPIERAWRDFAGEIAKHPAFDGAYAGNSP
EEEEECCCCCCCHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DAKPESYGSKAVPIETFEKVVAAEIAAHNARAGRRSSVCGGRLSFQQAFAASYADAIIRK
CCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAPAQSRLWLLACEGVKVRSDASVHLEGNRYWDEKLTDMVGHKVILRFDPADLHAGVCVY
CCCCCCCEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEE
RLDGAHVVDAPAIDKSGFRDVAEASAHGRARGAFLKAQRTLLDAVRTMSPDEVAAMSMQA
EECCCEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EVPEALPEPRAIRPIFGGAAALALQLEREPDQDVEPDAFSRGVGRLRLVTNNAADD
HCHHHCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]