| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248430
Identifier: 154248430
GI number: 154248430
Start: 4997038
End: 4998234
Strand: Reverse
Name: 154248430
Synonym: Xaut_4510
Alternate gene names: NA
Gene position: 4998234-4997038 (Counterclockwise)
Preceding gene: 154248431
Following gene: 154248429
Centisome position: 94.15
GC content: 69.92
Gene sequence:
>1197_bases ATGCTCTCCCAAGACATCATCGACGCCGTCGTCGCTGCCGCCCAGGGCGCGAGCATCCCGCCGGCCGCATTGCTCGCCGT CGTCGAGGTGGAGAGCGGCGGCACCGCGCTGGAGATCGATGGGCGCACCCCGCGCCTCCTCTTCGAGCGCCATGTGTTTT ATCGGGAGCTGAAGGCCGGCTGGAAGAAGAAGCTGGCCGCCGCCGTCGAGGCCGGTCTCGCCATCGCCGAATGGTCGCCC AAAACCCAGTACAAGGATCAGGGCCCATCGCGAAACCGCCTCGCGCTCCTCGCGAAGGCACGCGCGATCGAAGAGGAGCC GGCCAACCGCTCCTGCAGCTGGGGCCTTGGCCAGACCATGGGCTTCCTCGCCGAGGAGCTGGGCTACGGCACGGCCACCG ACATGGTGGCGAAGATGACCGCCGGCGGCATCGCCGTCCAGATCGACATGATGCTCGCGGAGATCCGGAAGAAGGGCCTC GTCGACGAGCTGCAGCGGCAGGACTGGGTCGGCTTCGCCATCCGCTACAATGGCCCCGGCTACGCCAAGAACCAGTACGA CACCAAGCTCGCCGGCGCCTTCCGCCGCTGGGAGCGCTGGCTTGCCGCCGCCGGCGCCGGCACGGCCAATCCGCTGCCGC AGCACACCCGTCTGACGAAGCGCGAGATCGAGGCCGTCCAGCAGCAACTCATCGACCTCGGCTATCCCAAGATCGGCCTC GTGGACGGCAAATGGGGGCCGGACACCACGGGCGCGGTCAGTGCGTTTCAGGCCTTCGAGGGCCTGCCCACCACCGGCGA CTATGACGACGCCACCCGGCAGGCCCTCGCCGAGGCGACGCCCCGCGCCGTCTCCGATGCCCGCGCCGCCACCAGCGCGG ATGACCTGCGCGCCGCCGGATCTCAGACGGTTGCCATCGCCGATAAGGGGCGCGGCATCGTCAAGACCATCGTGGGCCTC GGGCTCGCCGGCGGCGCCAAGGAGGCGGGCGATGCGGGGTTGCTCGACCAGGCGCAGTCGGCAGTCGATCAGGTGCAGGC CGTGCGCCCGCTGGTGGATGGCGCGCGCGAGCTGATCGGCTGGGCGACGTCGCACTGGTGGATCGGCGCGCTCATCGTCG GGTTTGTCCTCTGGCGCCAGTTCGGCGCCGTGATCAAGCGCCGCGTCTCCGACCAGGTGAGTGGCCGTCATGCGTGA
Upstream 100 bases:
>100_bases AGCTCGACTTCTTCCAGTTCTGACAGAGGTCAGGCGTCCGCATTCCTTCCACATACCGCAACGCGGCACAGTCCGGATCT ATCCGGACTGAGGCCGCACT
Downstream 100 bases:
>100_bases GCGCTCTCCCGATCGCGATTTCGAGGTCGCGTTGATCATCCTGCGTGAGGGCCACGTGGTGGCGCGCCGCAGCTGGGCCG ACGCCTGCGGCCCGGCCGAG
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: Phage-Related Protein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MLSQDIIDAVVAAAQGASIPPAALLAVVEVESGGTALEIDGRTPRLLFERHVFYRELKAGWKKKLAAAVEAGLAIAEWSP KTQYKDQGPSRNRLALLAKARAIEEEPANRSCSWGLGQTMGFLAEELGYGTATDMVAKMTAGGIAVQIDMMLAEIRKKGL VDELQRQDWVGFAIRYNGPGYAKNQYDTKLAGAFRRWERWLAAAGAGTANPLPQHTRLTKREIEAVQQQLIDLGYPKIGL VDGKWGPDTTGAVSAFQAFEGLPTTGDYDDATRQALAEATPRAVSDARAATSADDLRAAGSQTVAIADKGRGIVKTIVGL GLAGGAKEAGDAGLLDQAQSAVDQVQAVRPLVDGARELIGWATSHWWIGALIVGFVLWRQFGAVIKRRVSDQVSGRHA
Sequences:
>Translated_398_residues MLSQDIIDAVVAAAQGASIPPAALLAVVEVESGGTALEIDGRTPRLLFERHVFYRELKAGWKKKLAAAVEAGLAIAEWSP KTQYKDQGPSRNRLALLAKARAIEEEPANRSCSWGLGQTMGFLAEELGYGTATDMVAKMTAGGIAVQIDMMLAEIRKKGL VDELQRQDWVGFAIRYNGPGYAKNQYDTKLAGAFRRWERWLAAAGAGTANPLPQHTRLTKREIEAVQQQLIDLGYPKIGL VDGKWGPDTTGAVSAFQAFEGLPTTGDYDDATRQALAEATPRAVSDARAATSADDLRAAGSQTVAIADKGRGIVKTIVGL GLAGGAKEAGDAGLLDQAQSAVDQVQAVRPLVDGARELIGWATSHWWIGALIVGFVLWRQFGAVIKRRVSDQVSGRHA >Mature_398_residues MLSQDIIDAVVAAAQGASIPPAALLAVVEVESGGTALEIDGRTPRLLFERHVFYRELKAGWKKKLAAAVEAGLAIAEWSP KTQYKDQGPSRNRLALLAKARAIEEEPANRSCSWGLGQTMGFLAEELGYGTATDMVAKMTAGGIAVQIDMMLAEIRKKGL VDELQRQDWVGFAIRYNGPGYAKNQYDTKLAGAFRRWERWLAAAGAGTANPLPQHTRLTKREIEAVQQQLIDLGYPKIGL VDGKWGPDTTGAVSAFQAFEGLPTTGDYDDATRQALAEATPRAVSDARAATSADDLRAAGSQTVAIADKGRGIVKTIVGL GLAGGAKEAGDAGLLDQAQSAVDQVQAVRPLVDGARELIGWATSHWWIGALIVGFVLWRQFGAVIKRRVSDQVSGRHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42527; Mature: 42527
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQDIIDAVVAAAQGASIPPAALLAVVEVESGGTALEIDGRTPRLLFERHVFYRELKAG CCCHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH WKKKLAAAVEAGLAIAEWSPKTQYKDQGPSRNRLALLAKARAIEEEPANRSCSWGLGQTM HHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH GFLAEELGYGTATDMVAKMTAGGIAVQIDMMLAEIRKKGLVDELQRQDWVGFAIRYNGPG HHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCC YAKNQYDTKLAGAFRRWERWLAAAGAGTANPLPQHTRLTKREIEAVQQQLIDLGYPKIGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE VDGKWGPDTTGAVSAFQAFEGLPTTGDYDDATRQALAEATPRAVSDARAATSADDLRAAG ECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCC SQTVAIADKGRGIVKTIVGLGLAGGAKEAGDAGLLDQAQSAVDQVQAVRPLVDGARELIG CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WATSHWWIGALIVGFVLWRQFGAVIKRRVSDQVSGRHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLSQDIIDAVVAAAQGASIPPAALLAVVEVESGGTALEIDGRTPRLLFERHVFYRELKAG CCCHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH WKKKLAAAVEAGLAIAEWSPKTQYKDQGPSRNRLALLAKARAIEEEPANRSCSWGLGQTM HHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH GFLAEELGYGTATDMVAKMTAGGIAVQIDMMLAEIRKKGLVDELQRQDWVGFAIRYNGPG HHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCC YAKNQYDTKLAGAFRRWERWLAAAGAGTANPLPQHTRLTKREIEAVQQQLIDLGYPKIGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE VDGKWGPDTTGAVSAFQAFEGLPTTGDYDDATRQALAEATPRAVSDARAATSADDLRAAG ECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCC SQTVAIADKGRGIVKTIVGLGLAGGAKEAGDAGLLDQAQSAVDQVQAVRPLVDGARELIG CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WATSHWWIGALIVGFVLWRQFGAVIKRRVSDQVSGRHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA