Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 154248365

GI number: 154248365

Start: 4934349

End: 4936229

Strand: Direct

Name: mmgC [H]

Synonym: Xaut_4445

Alternate gene names: 154248365

Gene position: 4934349-4936229 (Clockwise)

Preceding gene: 154248364

Following gene: 154248366

Centisome position: 92.94

GC content: 66.88

Gene sequence:

>1881_bases
ATGACGGCGGTTAGAAGCGGTCCGCCCCCGCTCCCGGTCGCAAGATTGGCGAGCGAAAAGGCAGGAACACGAGACACGGG
AGCCAACGCCATGCAGGTCTATACCCCTCCGCTGCGCGACATGCGCTTCGTCCTCCACGAGCTGCATGGCAGCGCGGAGC
TTTCCACCCTCAAGGGGCTGGAGGAGGTCACGCCCGACCTCATCGACGCCGTGCTGGAGGAGGCCGGGAAATTCGTCACC
GAGGTTCTCGCGCCCCTCAACCAGTCGGGCGACCTCGAAGGCTGCACCTATGAGAACGGCGTGGTGCGCACCCCCAAGGG
CTTCAAGGAAGCCTACAAGGCCTTCTGCGAGGGCGGCTGGAACGGCATCGCCTGCGATCCGCAGTACGGCGGGCAGGGCC
TGCCGGCGAGCCTGAACAAGCTGGTGGAGGAGATGCTGTGCTCCGGCAACCTCGCCTTCGGCATCTGCCCCGGCCTCACC
CACGGCGCCTATGAGGCGCTGAAGAATCACGCCTCGCACGAGCTGAAGGACCGCTTCCTGCCGAAGATGGTGGATGGCGT
GTGGTCCGGCTCCATGTGCCTCACCGAGCCCCACTGCGGCACCGACCTCGGCCTCGTGCGCACCAAGGCCGAGCCGCAAG
GCGATGGCTCCTACAAGGTCACCGGCAACAAGATCTTCATCTCCGCCGGCGAGCACGACATGGCGGAGAACATCATCCAC
CTGGTGCTGGCCCGCCTGCCGGACGCGCCCAAGGGCATCAAGGGCATCTCCCTGTTCCTGGTGCCGAAATTCCTGCCGCG
CGAAGATGGATCCGTGGGCCCGCGCAATGGCGTCACCTGCACCGGCATCGAGCACAAGATGGGCATCCACGGCTCGTCCA
CCTGCCAGATGTCGTTCGACGAGGCCACCGGATGGCTGGTGGGCGAGCCCCACAAGGGCATGCGCGCCATGTTCTCCATG
ATGAATTCCGAGCGCCTGTCGGTGGGCACGCAGGGCCTCGGCCTCGGCGAGGCCGCCTATCAGGCCGCCGTGGCCTACGC
CAAGGAGCGCCTGCAGGGCCGTTCGCTCTCCGGCGCCAAGCATCCCGACAAGCCGGCCGATCCCATCATCGTGCACCCGG
ACGTGCGGCGCACCCTGATGACCATGCGCGCCTATAACGAAGGCTGCCGGGCCCTCGCCGGCTGGGTGGCCCGCGCCCTC
GATCTCATGGAGCACGCGGAAGACGCGCAGGAGCGCCAGCGGGCGGAGGATTTCACCGCCCTGATGACCCCCATCGTGAA
GGCGCTGTTCACGGACCTGGGCTTCGAGGCCACCTCCATGGGCATGCAGGTCTATGGCGGCCACGGCTACATCCGCGACC
ACGGCATGGAGCAATATGTGCGCGATGCCCGCATCGCCATGATCTACGAGGGCACCAACGGGGTGCAGGCGCTCGATCTC
GTGGGCCGCAAGCTGCCGGCGCACATGGGGCGCTATCTGCGCTCCTTCTTCCATCCCGTGCTGAACTACATGGACGCCAA
GCTCGACGACGAGAACCTCGGCCCGCTCATCACCCCGCTCTCCAAGGCGTTCGGCGCGCTCCAGCTCGCCACCGCCCACA
TCGCCGAGAAGGGCCTGAAGGACCCGGAGGAGGCGGGCGCGGCGGCGACCCAGTATCTGCGCCTGTTCGGCATGGTGGCG
CTGGGCTACATGTGGGTGCGCATGGCGGAAGTGGCGTTTGAGAAGCGCGTCTCCAACCCGGATGACGCCGCCTTCTACGA
GGCCAAGATCGCCACCGCGCGCTTCTTCATGGAGAAGCTGCTGCCGGACGTGGCGGCGCTGTGGGGCTCCATCAAGGCCG
GAAAGGCCTCCATGATGGCCCTCGACGAGGCCATGTTCTGA

Upstream 100 bases:

>100_bases
ATGGCCGGGCTTGACCCGGCCATCCATGCGGTTGGACCGGGCGCAAGCTCCGAAACGGAGCGCAAACGGCACGGCGTGGA
GGCCCGGCACAAGGCTGGGC

Downstream 100 bases:

>100_bases
GGGATCATTCCCCCGGAACCCGAGGTACCGATTCTCGACTTCCTCCCACCGCCCCGCTTCCGGGGCGGCTTTTTTTGAGG
TGACACGGATGGCCGATCTT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MTAVRSGPPPLPVARLASEKAGTRDTGANAMQVYTPPLRDMRFVLHELHGSAELSTLKGLEEVTPDLIDAVLEEAGKFVT
EVLAPLNQSGDLEGCTYENGVVRTPKGFKEAYKAFCEGGWNGIACDPQYGGQGLPASLNKLVEEMLCSGNLAFGICPGLT
HGAYEALKNHASHELKDRFLPKMVDGVWSGSMCLTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIH
LVLARLPDAPKGIKGISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAMFSM
MNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEGCRALAGWVARAL
DLMEHAEDAQERQRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDL
VGRKLPAHMGRYLRSFFHPVLNYMDAKLDDENLGPLITPLSKAFGALQLATAHIAEKGLKDPEEAGAAATQYLRLFGMVA
LGYMWVRMAEVAFEKRVSNPDDAAFYEAKIATARFFMEKLLPDVAALWGSIKAGKASMMALDEAMF

Sequences:

>Translated_626_residues
MTAVRSGPPPLPVARLASEKAGTRDTGANAMQVYTPPLRDMRFVLHELHGSAELSTLKGLEEVTPDLIDAVLEEAGKFVT
EVLAPLNQSGDLEGCTYENGVVRTPKGFKEAYKAFCEGGWNGIACDPQYGGQGLPASLNKLVEEMLCSGNLAFGICPGLT
HGAYEALKNHASHELKDRFLPKMVDGVWSGSMCLTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIH
LVLARLPDAPKGIKGISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAMFSM
MNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEGCRALAGWVARAL
DLMEHAEDAQERQRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDL
VGRKLPAHMGRYLRSFFHPVLNYMDAKLDDENLGPLITPLSKAFGALQLATAHIAEKGLKDPEEAGAAATQYLRLFGMVA
LGYMWVRMAEVAFEKRVSNPDDAAFYEAKIATARFFMEKLLPDVAALWGSIKAGKASMMALDEAMF
>Mature_625_residues
TAVRSGPPPLPVARLASEKAGTRDTGANAMQVYTPPLRDMRFVLHELHGSAELSTLKGLEEVTPDLIDAVLEEAGKFVTE
VLAPLNQSGDLEGCTYENGVVRTPKGFKEAYKAFCEGGWNGIACDPQYGGQGLPASLNKLVEEMLCSGNLAFGICPGLTH
GAYEALKNHASHELKDRFLPKMVDGVWSGSMCLTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIHL
VLARLPDAPKGIKGISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAMFSMM
NSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEGCRALAGWVARALD
LMEHAEDAQERQRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDLV
GRKLPAHMGRYLRSFFHPVLNYMDAKLDDENLGPLITPLSKAFGALQLATAHIAEKGLKDPEEAGAAATQYLRLFGMVAL
GYMWVRMAEVAFEKRVSNPDDAAFYEAKIATARFFMEKLLPDVAALWGSIKAGKASMMALDEAMF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=419, Percent_Identity=26.7303102625298, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI226958412, Length=417, Percent_Identity=27.3381294964029, Blast_Score=113, Evalue=6e-25,
Organism=Homo sapiens, GI226958414, Length=385, Percent_Identity=27.2727272727273, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI21361497, Length=388, Percent_Identity=25, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI7656849, Length=371, Percent_Identity=26.9541778975741, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI4557233, Length=384, Percent_Identity=27.6041666666667, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI4557235, Length=415, Percent_Identity=24.8192771084337, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI76496475, Length=415, Percent_Identity=24.8192771084337, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI4501857, Length=343, Percent_Identity=26.2390670553936, Blast_Score=97, Evalue=6e-20,
Organism=Escherichia coli, GI87082384, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17508101, Length=430, Percent_Identity=26.5116279069767, Blast_Score=107, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=432, Percent_Identity=25.462962962963, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=385, Percent_Identity=25.7142857142857, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=391, Percent_Identity=26.5984654731458, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=391, Percent_Identity=26.5984654731458, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=24.3835616438356, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=26.063829787234, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=368, Percent_Identity=25.2717391304348, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=384, Percent_Identity=26.0416666666667, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=366, Percent_Identity=26.775956284153, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=240, Percent_Identity=29.5833333333333, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=243, Percent_Identity=27.5720164609054, Blast_Score=80, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=25.531914893617, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=236, Percent_Identity=26.6949152542373, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=26.3297872340426, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=433, Percent_Identity=26.3279445727483, Blast_Score=106, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24646207, Length=374, Percent_Identity=25.668449197861, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281363737, Length=400, Percent_Identity=25.25, Blast_Score=100, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 67947; Mature: 67816

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVRSGPPPLPVARLASEKAGTRDTGANAMQVYTPPLRDMRFVLHELHGSAELSTLKGL
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHH
EEVTPDLIDAVLEEAGKFVTEVLAPLNQSGDLEGCTYENGVVRTPKGFKEAYKAFCEGGW
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCC
NGIACDPQYGGQGLPASLNKLVEEMLCSGNLAFGICPGLTHGAYEALKNHASHELKDRFL
CCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
PKMVDGVWSGSMCLTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIH
HHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCCCEEEECCEEEEECCCHHHHHHHHH
LVLARLPDAPKGIKGISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFD
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCEEEEHH
EATGWLVGEPHKGMRAMFSMMNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAK
CCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
HPDKPADPIIVHPDVRRTLMTMRAYNEGCRALAGWVARALDLMEHAEDAQERQRAEDFTA
CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTPIVKALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDL
HHHHHHHHHHHHCCCHHHHCCEEEECCCCCHHHCCHHHHHCCCEEEEEEECCCCHHHHHH
VGRKLPAHMGRYLRSFFHPVLNYMDAKLDDENLGPLITPLSKAFGALQLATAHIAEKGLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DPEEAGAAATQYLRLFGMVALGYMWVRMAEVAFEKRVSNPDDAAFYEAKIATARFFMEKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LPDVAALWGSIKAGKASMMALDEAMF
HHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TAVRSGPPPLPVARLASEKAGTRDTGANAMQVYTPPLRDMRFVLHELHGSAELSTLKGL
CCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHH
EEVTPDLIDAVLEEAGKFVTEVLAPLNQSGDLEGCTYENGVVRTPKGFKEAYKAFCEGGW
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCC
NGIACDPQYGGQGLPASLNKLVEEMLCSGNLAFGICPGLTHGAYEALKNHASHELKDRFL
CCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
PKMVDGVWSGSMCLTEPHCGTDLGLVRTKAEPQGDGSYKVTGNKIFISAGEHDMAENIIH
HHHHHHHCCCCEEEECCCCCCCCCCEEECCCCCCCCCEEEECCEEEEECCCHHHHHHHHH
LVLARLPDAPKGIKGISLFLVPKFLPREDGSVGPRNGVTCTGIEHKMGIHGSSTCQMSFD
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCEEEEHH
EATGWLVGEPHKGMRAMFSMMNSERLSVGTQGLGLGEAAYQAAVAYAKERLQGRSLSGAK
CCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
HPDKPADPIIVHPDVRRTLMTMRAYNEGCRALAGWVARALDLMEHAEDAQERQRAEDFTA
CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTPIVKALFTDLGFEATSMGMQVYGGHGYIRDHGMEQYVRDARIAMIYEGTNGVQALDL
HHHHHHHHHHHHCCCHHHHCCEEEECCCCCHHHCCHHHHHCCCEEEEEEECCCCHHHHHH
VGRKLPAHMGRYLRSFFHPVLNYMDAKLDDENLGPLITPLSKAFGALQLATAHIAEKGLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
DPEEAGAAATQYLRLFGMVALGYMWVRMAEVAFEKRVSNPDDAAFYEAKIATARFFMEKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LPDVAALWGSIKAGKASMMALDEAMF
HHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]