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The map label for this gene is scpA [H]

Identifier: 154248330

GI number: 154248330

Start: 4889759

End: 4890607

Strand: Reverse

Name: scpA [H]

Synonym: Xaut_4410

Alternate gene names: 154248330

Gene position: 4890607-4889759 (Counterclockwise)

Preceding gene: 154248331

Following gene: 154248329

Centisome position: 92.12

GC content: 70.08

Gene sequence:

>849_bases
ATGGCGGGCGAGGCCGCACCGGACCCCTTCGAGGCTGGCGCCGACCGCGTCGAACCCGGGTCCGGCGAGGCCTTCATGGT
GGATGTGGACGGCTTCGAGGGTCCCCTCGACCTGCTGCTCGCCCTCGCCCGCACCCAGAAGGTGGACCTCACCCGCATCT
CCATCCTGGCGCTGGCGGACCAGTATCTCACCTTCATCGAGGAAGCTCGGCGCGGTCGGCTGGAGCTGGCCGCCGACTAT
CTGGTGATGGCGGCCTGGCTCGCCTACCTCAAATCCCGCCTGCTGCTGCCGGCCCCGCCGCAGGAGGATGGGCCGAGCGC
CGAGGAGCTGGCTGCCGCCTTCACCCGGCGCCTGCGGCACCTGGAGCGCATCCGCAAGGCCGCGCAGGAGCTGATGGCGC
GTCCCCAGATGGGCCGGGACAGTTTTCCCCGTGCCGTGCCGCCCTCGTCCGACCAGCCGCTCTACACGGTATGGACAGCG
ACCATCTACGACCTCCTGTCGGCCTATGCCCGGCAGCGGCAAACGCAGGTTCTGTCTCACGTCACGCTCAAGACGCGCGC
GGTCTGGTCGCTGGCGGACGCGCGGGCACGGCTCGAACGGCTGCTGGGGGCGGATGCCGTGGGCGAATGGATGCGGCTTG
ACCAATTCCTGCTAGATTACATGGCTGAGCCCGAGCAGCGGGCGACCGCGCTCGCGTCGAGCTTTTCCGCCAGCCTGGAA
ATGGTGCGCGAAGGCATGCTGGACATCCGGCAGGATGCCCCCTTCGCGCCCCTGTGGCTGCGGCCGCGCCCGGCGGAGCC
CGTGCTGCCGTTTGAGGCGCCCCATGAGGCGCCCGGAGAGGAGACATGA

Upstream 100 bases:

>100_bases
GGGCGGACCGCGCCCTCGCCCTGCGCCAGATTCCAGCGGAGGTGGACGCCGCAGCGCTGCGCGAGGCTGTGGCGGCGCAC
ATCCGGCAGGTCGCCTGACC

Downstream 100 bases:

>100_bases
CCCGGCCCGCACCGCGCATCGACCTGTTCGACGTGCGTCCGGAGGACGAGCGCGCCTATGCTTTCGCGCGCGACCTGCGC
GTGATCGAGGCGCTGCTCTT

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAGEAAPDPFEAGADRVEPGSGEAFMVDVDGFEGPLDLLLALARTQKVDLTRISILALADQYLTFIEEARRGRLELAADY
LVMAAWLAYLKSRLLLPAPPQEDGPSAEELAAAFTRRLRHLERIRKAAQELMARPQMGRDSFPRAVPPSSDQPLYTVWTA
TIYDLLSAYARQRQTQVLSHVTLKTRAVWSLADARARLERLLGADAVGEWMRLDQFLLDYMAEPEQRATALASSFSASLE
MVREGMLDIRQDAPFAPLWLRPRPAEPVLPFEAPHEAPGEET

Sequences:

>Translated_282_residues
MAGEAAPDPFEAGADRVEPGSGEAFMVDVDGFEGPLDLLLALARTQKVDLTRISILALADQYLTFIEEARRGRLELAADY
LVMAAWLAYLKSRLLLPAPPQEDGPSAEELAAAFTRRLRHLERIRKAAQELMARPQMGRDSFPRAVPPSSDQPLYTVWTA
TIYDLLSAYARQRQTQVLSHVTLKTRAVWSLADARARLERLLGADAVGEWMRLDQFLLDYMAEPEQRATALASSFSASLE
MVREGMLDIRQDAPFAPLWLRPRPAEPVLPFEAPHEAPGEET
>Mature_281_residues
AGEAAPDPFEAGADRVEPGSGEAFMVDVDGFEGPLDLLLALARTQKVDLTRISILALADQYLTFIEEARRGRLELAADYL
VMAAWLAYLKSRLLLPAPPQEDGPSAEELAAAFTRRLRHLERIRKAAQELMARPQMGRDSFPRAVPPSSDQPLYTVWTAT
IYDLLSAYARQRQTQVLSHVTLKTRAVWSLADARARLERLLGADAVGEWMRLDQFLLDYMAEPEQRATALASSFSASLEM
VREGMLDIRQDAPFAPLWLRPRPAEPVLPFEAPHEAPGEET

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 31412; Mature: 31281

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGEAAPDPFEAGADRVEPGSGEAFMVDVDGFEGPLDLLLALARTQKVDLTRISILALAD
CCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
QYLTFIEEARRGRLELAADYLVMAAWLAYLKSRLLLPAPPQEDGPSAEELAAAFTRRLRH
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LERIRKAAQELMARPQMGRDSFPRAVPPSSDQPLYTVWTATIYDLLSAYARQRQTQVLSH
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
VTLKTRAVWSLADARARLERLLGADAVGEWMRLDQFLLDYMAEPEQRATALASSFSASLE
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MVREGMLDIRQDAPFAPLWLRPRPAEPVLPFEAPHEAPGEET
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGEAAPDPFEAGADRVEPGSGEAFMVDVDGFEGPLDLLLALARTQKVDLTRISILALAD
CCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
QYLTFIEEARRGRLELAADYLVMAAWLAYLKSRLLLPAPPQEDGPSAEELAAAFTRRLRH
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LERIRKAAQELMARPQMGRDSFPRAVPPSSDQPLYTVWTATIYDLLSAYARQRQTQVLSH
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
VTLKTRAVWSLADARARLERLLGADAVGEWMRLDQFLLDYMAEPEQRATALASSFSASLE
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MVREGMLDIRQDAPFAPLWLRPRPAEPVLPFEAPHEAPGEET
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]