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The map label for this gene is 154248282

Identifier: 154248282

GI number: 154248282

Start: 4835187

End: 4835996

Strand: Direct

Name: 154248282

Synonym: Xaut_4362

Alternate gene names: NA

Gene position: 4835187-4835996 (Clockwise)

Preceding gene: 154248281

Following gene: 154248283

Centisome position: 91.08

GC content: 60.86

Gene sequence:

>810_bases
ATGGCGTTGCGTCCCTACTGGAAGGGTTATCTCAAGCTCTCCCTCGTCACCTGCCCTGTCCAGATGATGCCGGCGACGTC
GGAGAGTGAAAAGGTGCGTTTCCACACCCTGAACCGCCAGACCCACAACCGCGTCGTCAGCCATTACGTGGACGCGGTCA
CGGGTAATGAGGTCGGGGAAGACGACGAAGTGAAAGGCTATCAGCGCGGGGAAAACGACTACATCATCCTCGAAGACGAG
GAACTGGAGAACGTCGCGCTCGACAGTACGAAGACCATCGACATCGATGTCTTCGCGCCGCACGCTTCCATCGACTGGAT
CTGGCTCGACACGCCTTACTACCTGTCACCGGACGACCCGGTCGGCCAGGAAGCATTCTCGGTGATCCGGGACGCCATGG
CCGCCGAGCACATGGTGGGGATTTCCCGTCTCGTGATCTCGCGCCGCGAGCGCGCTGTGATGCTGGAGCCGCGGGGCAAG
GGCATCGTCCTTTGGACGTTGCGCTATGGCGACGAGGTCCGGGACGAGGCGGACTATTTCGGCGGGATCGACGATGAACC
GTCCGATTCCGAGCTGATGCCGCTTATCGAGCAGTTGATCCGGAAAGAGACCCGCCACTGGGACAGCAAGCTGGTGGCCG
ACCCGGTGCAGGACAAGCTGCTTGAGATCATTGAGGCCAAGCGGAAGAAGACCAAGCGGCCGGCAAAGACCAGGTCCTCT
GAGCCGAAGGCCATGCCCAATAATGTCGTCAATATCATGGACGCCCTGCGCAAATCCGTCGCGGCAGAGACCCGGACAGG
CAAGCGTTAG

Upstream 100 bases:

>100_bases
CGCCGGCGAGAGCCCCCCGAAGGCGAAGCGTGCCTCCCGGACCAAAACCTCCCGCTCTAAAACATCACGCTCCAAGCGAG
CCGCCTGATCGGAGGCCGTC

Downstream 100 bases:

>100_bases
TGGCAGGCGCAGCCAGTCTATTTCGCCACGGCTCCGACACTCGTGACCATCCATTTCTCCAGCCAAGCTGAAACGCAGGC
TACGTCCCGGCGTTTCAGTT

Product: Ku family containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTHNRVVSHYVDAVTGNEVGEDDEVKGYQRGENDYIILEDE
ELENVALDSTKTIDIDVFAPHASIDWIWLDTPYYLSPDDPVGQEAFSVIRDAMAAEHMVGISRLVISRRERAVMLEPRGK
GIVLWTLRYGDEVRDEADYFGGIDDEPSDSELMPLIEQLIRKETRHWDSKLVADPVQDKLLEIIEAKRKKTKRPAKTRSS
EPKAMPNNVVNIMDALRKSVAAETRTGKR

Sequences:

>Translated_269_residues
MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTHNRVVSHYVDAVTGNEVGEDDEVKGYQRGENDYIILEDE
ELENVALDSTKTIDIDVFAPHASIDWIWLDTPYYLSPDDPVGQEAFSVIRDAMAAEHMVGISRLVISRRERAVMLEPRGK
GIVLWTLRYGDEVRDEADYFGGIDDEPSDSELMPLIEQLIRKETRHWDSKLVADPVQDKLLEIIEAKRKKTKRPAKTRSS
EPKAMPNNVVNIMDALRKSVAAETRTGKR
>Mature_268_residues
ALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTHNRVVSHYVDAVTGNEVGEDDEVKGYQRGENDYIILEDEE
LENVALDSTKTIDIDVFAPHASIDWIWLDTPYYLSPDDPVGQEAFSVIRDAMAAEHMVGISRLVISRRERAVMLEPRGKG
IVLWTLRYGDEVRDEADYFGGIDDEPSDSELMPLIEQLIRKETRHWDSKLVADPVQDKLLEIIEAKRKKTKRPAKTRSSE
PKAMPNNVVNIMDALRKSVAAETRTGKR

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 30727; Mature: 30596

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTHNRVVSHYVDAVTGNEVGE
CCCCCHHHHEEEEEEEECCCEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
DDEVKGYQRGENDYIILEDEELENVALDSTKTIDIDVFAPHASIDWIWLDTPYYLSPDDP
CCCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEECCCCCEEEEECCCCEEECCCCC
VGQEAFSVIRDAMAAEHMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEADYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCHHHHHHHHC
GGIDDEPSDSELMPLIEQLIRKETRHWDSKLVADPVQDKLLEIIEAKRKKTKRPAKTRSS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
EPKAMPNNVVNIMDALRKSVAAETRTGKR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTHNRVVSHYVDAVTGNEVGE
CCCCHHHHEEEEEEEECCCEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
DDEVKGYQRGENDYIILEDEELENVALDSTKTIDIDVFAPHASIDWIWLDTPYYLSPDDP
CCCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEECCCCCEEEEECCCCEEECCCCC
VGQEAFSVIRDAMAAEHMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEADYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCHHHHHHHHC
GGIDDEPSDSELMPLIEQLIRKETRHWDSKLVADPVQDKLLEIIEAKRKKTKRPAKTRSS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
EPKAMPNNVVNIMDALRKSVAAETRTGKR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA