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The map label for this gene is yajC [H]

Identifier: 154248228

GI number: 154248228

Start: 4775714

End: 4776061

Strand: Direct

Name: yajC [H]

Synonym: Xaut_4308

Alternate gene names: 154248228

Gene position: 4775714-4776061 (Clockwise)

Preceding gene: 154248226

Following gene: 154248229

Centisome position: 89.96

GC content: 68.1

Gene sequence:

>348_bases
ATGTTCATTACGCCCGCTTTCGCCCAAGGCGCCACGGGAGCCGGCGGCGGGGCCGACATGCTCATTCAGCTCGCTCCGTT
CCTGCTCATCTTCGTGGTGATGTATTTCCTCATCCTGCGGCCGCAGCAGAAGCGCGCCAAGGCCCACCAGGAAATGGTCG
GCGCCCTGCGTCGCGGTGACGTGATCGTCACTGCCGGCGGCCTCGTGGGCAAGGTGACCCGCGTGGTGGACGACGCCGAG
ATCGAGCTGCAGATCGCCGACAATGTCCGGGTGCGGCAGCTGCGCACGCAGATCGCCACCGTCCGCGCCAAGGGCGAGCC
GGCCAAGGACGAAGCGCCCGCGGCCTGA

Upstream 100 bases:

>100_bases
GCCCCTCGTTTGCATTCGACGGGCCGGCCGCTATAGTCCCGCCGCCCCGCCGGACCCCGGCGCGGCAGGGATTCCCACCA
CCGACCGAACGAGGACGCAA

Downstream 100 bases:

>100_bases
GCCGCCGATTCCCTTTTGAGATAAACGCGCGACATGCTGCACTTCTCCCGCCTCAAGACCACGGCGATCCTCCTCACCAT
CGCCGTGGGACTCTTGTTCG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MFITPAFAQGATGAGGGADMLIQLAPFLLIFVVMYFLILRPQQKRAKAHQEMVGALRRGDVIVTAGGLVGKVTRVVDDAE
IELQIADNVRVRQLRTQIATVRAKGEPAKDEAPAA

Sequences:

>Translated_115_residues
MFITPAFAQGATGAGGGADMLIQLAPFLLIFVVMYFLILRPQQKRAKAHQEMVGALRRGDVIVTAGGLVGKVTRVVDDAE
IELQIADNVRVRQLRTQIATVRAKGEPAKDEAPAA
>Mature_115_residues
MFITPAFAQGATGAGGGADMLIQLAPFLLIFVVMYFLILRPQQKRAKAHQEMVGALRRGDVIVTAGGLVGKVTRVVDDAE
IELQIADNVRVRQLRTQIATVRAKGEPAKDEAPAA

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=105, Percent_Identity=40.9523809523809, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12327; Mature: 12327

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITPAFAQGATGAGGGADMLIQLAPFLLIFVVMYFLILRPQQKRAKAHQEMVGALRRGD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
VIVTAGGLVGKVTRVVDDAEIELQIADNVRVRQLRTQIATVRAKGEPAKDEAPAA
EEEECCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFITPAFAQGATGAGGGADMLIQLAPFLLIFVVMYFLILRPQQKRAKAHQEMVGALRRGD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
VIVTAGGLVGKVTRVVDDAEIELQIADNVRVRQLRTQIATVRAKGEPAKDEAPAA
EEEECCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]