Click here to switch to the map view.

The map label for this gene is groS [H]

Identifier: 154248185

GI number: 154248185

Start: 4733479

End: 4733793

Strand: Reverse

Name: groS [H]

Synonym: Xaut_4265

Alternate gene names: 154248185

Gene position: 4733793-4733479 (Counterclockwise)

Preceding gene: 154248203

Following gene: 154248184

Centisome position: 89.17

GC content: 64.76

Gene sequence:

>315_bases
ATGGGTTTCCGTCCTCTGCACGACCGCGTGGTTGTGAAGCGCATCGAAGCCGAGCAGAAGACTGCCGGCGGCATCATCAT
TCCCGACAGCGCCAAGGAAAAGCCCCAGCAGGGCGAAGTCGTCTCCGTGGGCCCGGGTGCCCGCAACGAGAAGGGCGAGC
TCGTCGCCCTCGACGTGAAGGCCGGCGACCTGGTGCTGTTCGGCAAGTGGTCGGGCACCGAGGTGAAGATCGACGGCCAG
GATCTCCTGATCATGAAGGAGAGCGACATCCTCGGCGTGCTCGAGACTTCGGCCAACGCCCAGAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
ACCCCCTTGCGGGACGAAAACCGCGGTCTTAGATCGCGGTCGGGCCGGGTGCTCTTAGGCCCGGCGCCTTGAATTGAAGC
ATCGAACCGGAGGTTTCCCG

Downstream 100 bases:

>100_bases
GTCAGCCCGGCTGACCGCGGTTTTCATCCACACCCCCTCTTCCGTCCCAATCTGAAGGAGCAGGCCACATGGCTGCCAAG
GACGTAAAATTCTCCGTTGA

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MGFRPLHDRVVVKRIEAEQKTAGGIIIPDSAKEKPQQGEVVSVGPGARNEKGELVALDVKAGDLVLFGKWSGTEVKIDGQ
DLLIMKESDILGVLETSANAQKAA

Sequences:

>Translated_104_residues
MGFRPLHDRVVVKRIEAEQKTAGGIIIPDSAKEKPQQGEVVSVGPGARNEKGELVALDVKAGDLVLFGKWSGTEVKIDGQ
DLLIMKESDILGVLETSANAQKAA
>Mature_103_residues
GFRPLHDRVVVKRIEAEQKTAGGIIIPDSAKEKPQQGEVVSVGPGARNEKGELVALDVKAGDLVLFGKWSGTEVKIDGQD
LLIMKESDILGVLETSANAQKAA

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Homo sapiens, GI4504523, Length=90, Percent_Identity=43.3333333333333, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=53.125, Blast_Score=97, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=51.6129032258064, Blast_Score=100, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6324594, Length=89, Percent_Identity=41.5730337078652, Blast_Score=72, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358317, Length=93, Percent_Identity=45.1612903225806, Blast_Score=79, Evalue=7e-16,
Organism=Drosophila melanogaster, GI21356029, Length=94, Percent_Identity=43.6170212765958, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 11065; Mature: 10934

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRPLHDRVVVKRIEAEQKTAGGIIIPDSAKEKPQQGEVVSVGPGARNEKGELVALDVK
CCCCCCCCHHHEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
AGDLVLFGKWSGTEVKIDGQDLLIMKESDILGVLETSANAQKAA
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
GFRPLHDRVVVKRIEAEQKTAGGIIIPDSAKEKPQQGEVVSVGPGARNEKGELVALDVK
CCCCCCCHHHEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEC
AGDLVLFGKWSGTEVKIDGQDLLIMKESDILGVLETSANAQKAA
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA