| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248046
Identifier: 154248046
GI number: 154248046
Start: 4564948
End: 4565499
Strand: Reverse
Name: 154248046
Synonym: Xaut_4125
Alternate gene names: NA
Gene position: 4565499-4564948 (Counterclockwise)
Preceding gene: 154248049
Following gene: 154248044
Centisome position: 86.0
GC content: 66.85
Gene sequence:
>552_bases ATGCGCACGATGCGACCTCATCTGATGCGAAGCCTCAAGGCCCTTGCATTGGCGCTGGCGGTCACCGGGGGCGCCGGGCT TCAGCCCATCACCGCGCGGCCCGCCATGGCCGCCGAGGATGGCACCTCCGGTCTGCCGGTGCCGCGCTTCGTCTCGCTCA AGGCGGACAAGGTAAATGTGCGCAACGGCCCCAACAAGGACCACGACGTGTCGTGGGTGTTCAACCGCGCCGGCCTGCCG GTGGAAGTGACCGCCGAGTTCGAGACCTGGCGCCGCATCCGCGATGCTGATGGAGCGGAAGGCTGGGTCTACCATTCCAT GCTGTCGCTGCGCCGCACCGCTCTGGTTGCGCCCTGGCTGAAGGGCGAGACCGTGCCCATGCGCGATGCCCCCAATACCG ACGCCAAGGTGGTGGCTCGGCTGGAGCCCAGCGTGCTCGGCGTGGTGAAGACCTGCGACGGCAAGTTCTGCCGGCTCATC GGCGACGGCTTCGACGGCTATGTGCAGCAGTCGCAGCTGTTCGGCATCTACCCCAACGAAAAGGTGGAGTGA
Upstream 100 bases:
>100_bases ACAGGGAAACACAAGGCGCCCTGCACCGCGTGCCCTTGACGCGCCCGGTAGAGCGGCGCACTCCCCCGTTGCGAGAGCAA TACGAAAGGACGAGCCCGTC
Downstream 100 bases:
>100_bases CACCAGCGCGGCCCGGTAGCGCCGGACCGCACTTGGCATGAAGCCAGCGTGGCGCCTGAGCCCACTCGGCACCAGTCCAA GACCGGTGCCCGTGGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MRTMRPHLMRSLKALALALAVTGGAGLQPITARPAMAAEDGTSGLPVPRFVSLKADKVNVRNGPNKDHDVSWVFNRAGLP VEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPWLKGETVPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLI GDGFDGYVQQSQLFGIYPNEKVE
Sequences:
>Translated_183_residues MRTMRPHLMRSLKALALALAVTGGAGLQPITARPAMAAEDGTSGLPVPRFVSLKADKVNVRNGPNKDHDVSWVFNRAGLP VEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPWLKGETVPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLI GDGFDGYVQQSQLFGIYPNEKVE >Mature_183_residues MRTMRPHLMRSLKALALALAVTGGAGLQPITARPAMAAEDGTSGLPVPRFVSLKADKVNVRNGPNKDHDVSWVFNRAGLP VEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPWLKGETVPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLI GDGFDGYVQQSQLFGIYPNEKVE
Specific function: Unknown
COG id: COG3807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20058; Mature: 20058
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTMRPHLMRSLKALALALAVTGGAGLQPITARPAMAAEDGTSGLPVPRFVSLKADKVNV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEC RNGPNKDHDVSWVFNRAGLPVEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPWL CCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC KGETVPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLIGDGFDGYVQQSQLFGIYPNE CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCEECCEEEEECCCC KVE CCC >Mature Secondary Structure MRTMRPHLMRSLKALALALAVTGGAGLQPITARPAMAAEDGTSGLPVPRFVSLKADKVNV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEC RNGPNKDHDVSWVFNRAGLPVEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPWL CCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC KGETVPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLIGDGFDGYVQQSQLFGIYPNE CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCEECCEEEEECCCC KVE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA