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The map label for this gene is ydhD [C]

Identifier: 154248009

GI number: 154248009

Start: 4527287

End: 4527673

Strand: Reverse

Name: ydhD [C]

Synonym: Xaut_4088

Alternate gene names: 154248009

Gene position: 4527673-4527287 (Counterclockwise)

Preceding gene: 154248010

Following gene: 154248008

Centisome position: 85.28

GC content: 60.72

Gene sequence:

>387_bases
TTGAAGCATGCTGGCCCTCATTCGGCCGATCAGAATGGATTTGAGACCATGGGTATTCGTGAAGACATCGACGCCATCGT
GAAGTCTGGTGACGTGGTCCTGTTCATGAAGGGCACGCCCCAGTTTCCGCAGTGCGGCTTTTCCGGGCAGGTGGTGCAGA
TCCTCGATCACGTGGGCGTCCCGTTCAAGGGCGTGAACGTGCTTGAAAACGACGCCGTCCGGCAGGGCATCAAGGACTAC
GCCAACTGGCCGACCATCCCGCAGCTCTACATCAAGGGCGAGTTCGTGGGTGGCTGCGACATCGTGCGCGAGATGTTCCA
GGCCGGCGAGCTGACCACCTTCCTTGAGGAAAAGGGCGTCGCCATCCGCGACCGCGCCATCGGCTGA

Upstream 100 bases:

>100_bases
GGACGGGCCCTCACCGAGCGTCGGTGTTCACGCGGCAGTGCACAACGCCACGGGCGGCGCCCCGTCGAACCCCTTGCGCT
TTGCCGCCTGAGGGCCGATC

Downstream 100 bases:

>100_bases
GTGTTCGAGCGGCGTGACCACGCCTGATCCGGCGCCCGCCGCGCCGCTCGCTCTCAAGCTTGCCCTCAGCCTGGGGCTGC
TGGCGAACGCTGGCCTTGCG

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKHAGPHSADQNGFETMGIREDIDAIVKSGDVVLFMKGTPQFPQCGFSGQVVQILDHVGVPFKGVNVLENDAVRQGIKDY
ANWPTIPQLYIKGEFVGGCDIVREMFQAGELTTFLEEKGVAIRDRAIG

Sequences:

>Translated_128_residues
MKHAGPHSADQNGFETMGIREDIDAIVKSGDVVLFMKGTPQFPQCGFSGQVVQILDHVGVPFKGVNVLENDAVRQGIKDY
ANWPTIPQLYIKGEFVGGCDIVREMFQAGELTTFLEEKGVAIRDRAIG
>Mature_128_residues
MKHAGPHSADQNGFETMGIREDIDAIVKSGDVVLFMKGTPQFPQCGFSGQVVQILDHVGVPFKGVNVLENDAVRQGIKDY
ANWPTIPQLYIKGEFVGGCDIVREMFQAGELTTFLEEKGVAIRDRAIG

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=101, Percent_Identity=57.4257425742574, Blast_Score=122, Evalue=7e-29,
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=48.4536082474227, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787943, Length=104, Percent_Identity=45.1923076923077, Blast_Score=108, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17556042, Length=103, Percent_Identity=54.3689320388349, Blast_Score=122, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71988159, Length=92, Percent_Identity=44.5652173913043, Blast_Score=99, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71988153, Length=92, Percent_Identity=44.5652173913043, Blast_Score=98, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=102, Percent_Identity=50.9803921568627, Blast_Score=116, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320303, Length=89, Percent_Identity=46.0674157303371, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=79, Percent_Identity=49.3670886075949, Blast_Score=91, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24642023, Length=101, Percent_Identity=51.4851485148515, Blast_Score=122, Evalue=6e-29,
Organism=Drosophila melanogaster, GI19921242, Length=98, Percent_Identity=38.7755102040816, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 14009; Mature: 14009

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHAGPHSADQNGFETMGIREDIDAIVKSGDVVLFMKGTPQFPQCGFSGQVVQILDHVGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCC
PFKGVNVLENDAVRQGIKDYANWPTIPQLYIKGEFVGGCDIVREMFQAGELTTFLEEKGV
CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHCCC
AIRDRAIG
EECCCCCC
>Mature Secondary Structure
MKHAGPHSADQNGFETMGIREDIDAIVKSGDVVLFMKGTPQFPQCGFSGQVVQILDHVGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCC
PFKGVNVLENDAVRQGIKDYANWPTIPQLYIKGEFVGGCDIVREMFQAGELTTFLEEKGV
CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHCCC
AIRDRAIG
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]