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The map label for this gene is trbE [H]

Identifier: 154247919

GI number: 154247919

Start: 4425146

End: 4427584

Strand: Reverse

Name: trbE [H]

Synonym: Xaut_3997

Alternate gene names: 154247919

Gene position: 4427584-4425146 (Counterclockwise)

Preceding gene: 154247920

Following gene: 154247918

Centisome position: 83.4

GC content: 67.73

Gene sequence:

>2439_bases
ATGATGAACCTCGCGGAATACCGGCGTCACGCCAGCCGGCTCGCCGACTACCTGCCCTGGGCGGCACTGGTCGGCTCTGG
CGTCGTCCTCAACAAGGATGGCAGCGTCCAGCGGACGGCACGCTTCCGTGGGCCGGACCTTGATTCCGCGGTGCCGGCCG
AACTGGTGGCGGCGGCGGGTCGCCTCAACAGCGCCTTTCGCCGCCTCGGCTCCGGCTGGGCACTCTTTGTGGAGGCCCAG
CGACACCCGGCGGGTGCCTATCCGGCGAGTGTCTTTCCCGATCCCGCCTCCGCGCTGGTCGAAGCCGAGCGCAAGGCCGA
CTTCGCGGAAGCCGGCAGCCATTTCGAATCCAGCTATTTCCTCACCTTCACCTGGCTGCCGCCGGCGGAGGACGCTGCAC
GGGCGGAGAGCTGGCTCTATGAAGGCCGCGCGCGTGGTGGCGTCGATCCCTATGAGGCGCTCGGCGCCTTCGTCGACCGC
ACGGACCGAGTCCTGCGGCTCGTCGAGGCCTTCATGCCCGAGTGCCGCTGGCTCGACGATGCCGAGACCCTCACATATCT
GCACGGTTGCGTCTCGACCAAGCGCCAGCGGGTCCGCGTTCCCGAGACGCCCATGTATCTCGACGCCCTGCTGGCAGACC
AGCCGCTCACCGGCGGGCTCGAGCCGATGCTGGGGTCCGAGCATCTACGCGTCCTCACCATCGTCGGCTTCCCGACGGCG
ACGACGCCGGGGATCCTCGACGACCTCAACCGGCTCGCCTTTCCCTATCGCTGGTCCACCCGCGCCATTCTCCTCGACAA
AACCGACGCCACCCGGCTCCTCACCAGGATCCGCCGGCAGTGGTTCGCCAAGCGCAAGTCCATCGCCGCCATCCTGAAGG
AGGTGATGACCAACGAGGCCTCGGTACTGGTGGATTCAGATGCCGCCAACAAGGCGGTGGATGCCGACCTCGCTTTGCAG
GAGCTCGGCGCCGACCATGCCGGCATCGCCTATCTTACCGCGACGGTGACCGTCTGGGACGCCGATCCCCGCATCGCTGA
CGAGAAGCTCCGGCTGGTGGAGAAGGCAATCCAGGGCCGGGACTTCACGGCCATGGTCGAGACGATCAATGCCGTGGATG
CCTGGCTCGGCAGCTTGCCGGGGCACGTCTACGCCAATGTCCGCCAACCGCCCATTTCCACCCTCAACCTCGCCCATATG
ATCCCGCTGTCGGCGGTGTGGGCGGGCGAGGCACAGGACGCGCATTTCGGCGGGCCGCCGTTGTTCTACGGCAAGACCGA
GGGGGCGACCCCGTTCCGTTTTTCCCTCCACGTTGGCGATGTGGGCCACACCCTCGTGATCGGGCCGACGGGCGCCGGCA
AGTCGGTGCTGCTGGCGCTGATGGCATTGCAGTTCCGGCGCTACGCTGGATCCCAGGTGTTCGCTTTCGACTTCGGCGGC
AGCATCCGGGCGGCCGCCCTCGCCATGGGCGGCGACTGGCACGACCTCGGCGGGAGCCTGTCCGATGGGAGCGAGGACAG
CGTCGCGCTCCAGCCTCTTTCCCGTGTGGATGATCTCGCCGAACGCTCATGGGCCGCCGACTGGATCACGGCGATCCTCT
CCCGCGAGGGCGTTTCCATCGCCCCGGAGGTGAAGGAGCACATCTGGTCGACCCTCACCTCCCTTGCCTCCGCTCCCGTC
GAGGAACGGACCCTCACCGGCCTCGCCGTCCTGCTCCAGTCCAACGATCTCAAACAGGCGCTACGCCCCTATTGTATCGG
TGGCGCCCATGGCCGGCTGCTCGATGCCGAGGCGGAGCACCTGGGGCAGGCCTTCGTCCAGGCCTTCGAGACCGAAGGGC
TGATCGGCACCACCGCGGCACCGGCCGTGCTGTCCTATCTGTTCCACCGCATCGAGGACCGGCTCAACGGGTCTCCGACC
CTCATCATCATCGATGAGGGATGGCTCGCCCTTGATGACCAGGGCTTTGCCGGCCAGCTCCGCGAGTGGCTTAAGACGCT
GCGGAAGAAGAACGCCAGCGTCGTCTTCGCCACGCAGTCCCTCTCCGACATCGACGGCTCGGCCATCGCCCCGGCCATCA
TCGAGAGCTGCCAGACGCGGCTGCTGCTCCCCAACGAGCGGGCCGTCGAGCCCCAGATCACCGCCATCTACCGGCGCTTC
GGCCTCAACGACCGGCAGATCGAGATCCTCGCACGGGCCACCCCGAAGCGGGACTATTACTGCCAGTCCCGACGCGGCAG
CCGCCTGTTCGAGCTCGGGCTGTCGCAGGTGGCGCTCGCCTTGTGCGCCGCCGGGTCCAAGACCGATCAGGCTGCGCTCT
CGCTGATCCTCGCCGAGCATGGGCGCGATGGTTTCCTCGCCGCCTGGCTACGGCATCGGGGCCTCGGCTGGGCCGCCGAC
CTCATCCCCACCCTCGACCTTCTGGAGACACGCTCATGA

Upstream 100 bases:

>100_bases
CTCGCCGCCGTCTGGGCCGCCAAGCGCGATCCGCTCTTCGTCGATGTGGTGCGCCGCCATCTGCGCATCCCCGGTCATCT
GTCGGTCTGAGGGGCGCATC

Downstream 100 bases:

>100_bases
TCCGCCTGATGCTGCGGGCGGCGCTCGTCGCTGCGCCGCTCCTCATGTGCCCTCTCGCGCCGGCCGCGGCACAGGCCGTG
GTCTTTGACCCCTCCAACTA

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MMNLAEYRRHASRLADYLPWAALVGSGVVLNKDGSVQRTARFRGPDLDSAVPAELVAAAGRLNSAFRRLGSGWALFVEAQ
RHPAGAYPASVFPDPASALVEAERKADFAEAGSHFESSYFLTFTWLPPAEDAARAESWLYEGRARGGVDPYEALGAFVDR
TDRVLRLVEAFMPECRWLDDAETLTYLHGCVSTKRQRVRVPETPMYLDALLADQPLTGGLEPMLGSEHLRVLTIVGFPTA
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTRIRRQWFAKRKSIAAILKEVMTNEASVLVDSDAANKAVDADLALQ
ELGADHAGIAYLTATVTVWDADPRIADEKLRLVEKAIQGRDFTAMVETINAVDAWLGSLPGHVYANVRQPPISTLNLAHM
IPLSAVWAGEAQDAHFGGPPLFYGKTEGATPFRFSLHVGDVGHTLVIGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
SIRAAALAMGGDWHDLGGSLSDGSEDSVALQPLSRVDDLAERSWAADWITAILSREGVSIAPEVKEHIWSTLTSLASAPV
EERTLTGLAVLLQSNDLKQALRPYCIGGAHGRLLDAEAEHLGQAFVQAFETEGLIGTTAAPAVLSYLFHRIEDRLNGSPT
LIIIDEGWLALDDQGFAGQLREWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAVEPQITAIYRRF
GLNDRQIEILARATPKRDYYCQSRRGSRLFELGLSQVALALCAAGSKTDQAALSLILAEHGRDGFLAAWLRHRGLGWAAD
LIPTLDLLETRS

Sequences:

>Translated_812_residues
MMNLAEYRRHASRLADYLPWAALVGSGVVLNKDGSVQRTARFRGPDLDSAVPAELVAAAGRLNSAFRRLGSGWALFVEAQ
RHPAGAYPASVFPDPASALVEAERKADFAEAGSHFESSYFLTFTWLPPAEDAARAESWLYEGRARGGVDPYEALGAFVDR
TDRVLRLVEAFMPECRWLDDAETLTYLHGCVSTKRQRVRVPETPMYLDALLADQPLTGGLEPMLGSEHLRVLTIVGFPTA
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTRIRRQWFAKRKSIAAILKEVMTNEASVLVDSDAANKAVDADLALQ
ELGADHAGIAYLTATVTVWDADPRIADEKLRLVEKAIQGRDFTAMVETINAVDAWLGSLPGHVYANVRQPPISTLNLAHM
IPLSAVWAGEAQDAHFGGPPLFYGKTEGATPFRFSLHVGDVGHTLVIGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
SIRAAALAMGGDWHDLGGSLSDGSEDSVALQPLSRVDDLAERSWAADWITAILSREGVSIAPEVKEHIWSTLTSLASAPV
EERTLTGLAVLLQSNDLKQALRPYCIGGAHGRLLDAEAEHLGQAFVQAFETEGLIGTTAAPAVLSYLFHRIEDRLNGSPT
LIIIDEGWLALDDQGFAGQLREWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAVEPQITAIYRRF
GLNDRQIEILARATPKRDYYCQSRRGSRLFELGLSQVALALCAAGSKTDQAALSLILAEHGRDGFLAAWLRHRGLGWAAD
LIPTLDLLETRS
>Mature_812_residues
MMNLAEYRRHASRLADYLPWAALVGSGVVLNKDGSVQRTARFRGPDLDSAVPAELVAAAGRLNSAFRRLGSGWALFVEAQ
RHPAGAYPASVFPDPASALVEAERKADFAEAGSHFESSYFLTFTWLPPAEDAARAESWLYEGRARGGVDPYEALGAFVDR
TDRVLRLVEAFMPECRWLDDAETLTYLHGCVSTKRQRVRVPETPMYLDALLADQPLTGGLEPMLGSEHLRVLTIVGFPTA
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTRIRRQWFAKRKSIAAILKEVMTNEASVLVDSDAANKAVDADLALQ
ELGADHAGIAYLTATVTVWDADPRIADEKLRLVEKAIQGRDFTAMVETINAVDAWLGSLPGHVYANVRQPPISTLNLAHM
IPLSAVWAGEAQDAHFGGPPLFYGKTEGATPFRFSLHVGDVGHTLVIGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
SIRAAALAMGGDWHDLGGSLSDGSEDSVALQPLSRVDDLAERSWAADWITAILSREGVSIAPEVKEHIWSTLTSLASAPV
EERTLTGLAVLLQSNDLKQALRPYCIGGAHGRLLDAEAEHLGQAFVQAFETEGLIGTTAAPAVLSYLFHRIEDRLNGSPT
LIIIDEGWLALDDQGFAGQLREWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAVEPQITAIYRRF
GLNDRQIEILARATPKRDYYCQSRRGSRLFELGLSQVALALCAAGSKTDQAALSLILAEHGRDGFLAAWLRHRGLGWAAD
LIPTLDLLETRS

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88461; Mature: 88461

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLAEYRRHASRLADYLPWAALVGSGVVLNKDGSVQRTARFRGPDLDSAVPAELVAAAG
CCCHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHH
RLNSAFRRLGSGWALFVEAQRHPAGAYPASVFPDPASALVEAERKADFAEAGSHFESSYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEE
LTFTWLPPAEDAARAESWLYEGRARGGVDPYEALGAFVDRTDRVLRLVEAFMPECRWLDD
EEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AETLTYLHGCVSTKRQRVRVPETPMYLDALLADQPLTGGLEPMLGSEHLRVLTIVGFPTA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCC
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTRIRRQWFAKRKSIAAILKEVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDSDAANKAVDADLALQELGADHAGIAYLTATVTVWDADPRIADEKLRLVEKAIQGR
EEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC
DFTAMVETINAVDAWLGSLPGHVYANVRQPPISTLNLAHMIPLSAVWAGEAQDAHFGGPP
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHEECCCCCCCCCCCCE
LFYGKTEGATPFRFSLHVGDVGHTLVIGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
EEECCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAALAMGGDWHDLGGSLSDGSEDSVALQPLSRVDDLAERSWAADWITAILSREGVSI
CHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APEVKEHIWSTLTSLASAPVEERTLTGLAVLLQSNDLKQALRPYCIGGAHGRLLDAEAEH
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCEECHHHHH
LGQAFVQAFETEGLIGTTAAPAVLSYLFHRIEDRLNGSPTLIIIDEGWLALDDQGFAGQL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHH
REWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAVEPQITAIYRRF
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHH
GLNDRQIEILARATPKRDYYCQSRRGSRLFELGLSQVALALCAAGSKTDQAALSLILAEH
CCCCCEEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GRDGFLAAWLRHRGLGWAADLIPTLDLLETRS
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMNLAEYRRHASRLADYLPWAALVGSGVVLNKDGSVQRTARFRGPDLDSAVPAELVAAAG
CCCHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHH
RLNSAFRRLGSGWALFVEAQRHPAGAYPASVFPDPASALVEAERKADFAEAGSHFESSYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEE
LTFTWLPPAEDAARAESWLYEGRARGGVDPYEALGAFVDRTDRVLRLVEAFMPECRWLDD
EEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AETLTYLHGCVSTKRQRVRVPETPMYLDALLADQPLTGGLEPMLGSEHLRVLTIVGFPTA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCC
TTPGILDDLNRLAFPYRWSTRAILLDKTDATRLLTRIRRQWFAKRKSIAAILKEVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDSDAANKAVDADLALQELGADHAGIAYLTATVTVWDADPRIADEKLRLVEKAIQGR
EEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC
DFTAMVETINAVDAWLGSLPGHVYANVRQPPISTLNLAHMIPLSAVWAGEAQDAHFGGPP
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHEECCCCCCCCCCCCE
LFYGKTEGATPFRFSLHVGDVGHTLVIGPTGAGKSVLLALMALQFRRYAGSQVFAFDFGG
EEECCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAALAMGGDWHDLGGSLSDGSEDSVALQPLSRVDDLAERSWAADWITAILSREGVSI
CHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APEVKEHIWSTLTSLASAPVEERTLTGLAVLLQSNDLKQALRPYCIGGAHGRLLDAEAEH
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCEECHHHHH
LGQAFVQAFETEGLIGTTAAPAVLSYLFHRIEDRLNGSPTLIIIDEGWLALDDQGFAGQL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCHHHH
REWLKTLRKKNASVVFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAVEPQITAIYRRF
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHH
GLNDRQIEILARATPKRDYYCQSRRGSRLFELGLSQVALALCAAGSKTDQAALSLILAEH
CCCCCEEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
GRDGFLAAWLRHRGLGWAADLIPTLDLLETRS
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]