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The map label for this gene is trbI [H]

Identifier: 154247913

GI number: 154247913

Start: 4419880

End: 4421124

Strand: Reverse

Name: trbI [H]

Synonym: Xaut_3991

Alternate gene names: 154247913

Gene position: 4421124-4419880 (Counterclockwise)

Preceding gene: 154247914

Following gene: 154247912

Centisome position: 83.28

GC content: 69.0

Gene sequence:

>1245_bases
ATGAGCGGCATCGAACCCGGGAAGGAGACAGGGCCGGAGCTGAGCGGTGATGACGGCGCTCGGCCACTGACGGGGGAGAC
TGTGTCGGCCATGCGGCTGCGGCCGGAACCGCCGCGGGTGACCCGCCTGTCCCGAAAGGTATTAGCCGGGCTGGGGCTCG
TTGCCGGCCTTGGGATCGGCGGGGCGCTGATCTACGCCCTGCAAGCGCGAAAGGACCACGGACACGGCCAGGAACTCTAC
GCCACCGACGTCAAGGCGACGCCGGACGGGCTCGCCGGCCTACCCAAGGATTACACCGGCATCCCCAAGCTCGGGCCTCC
GCTGCCCGGCGACCTCGGCCGGCCGATCCTCAATGCGCAGACGGCAGTGCAGCCGACGGTGCCGACAATGGGAGGCATGC
CAAATCCCGCCTTGAGCCCCGAGGAGCAACGCCAGCAGCGGGAAAGCGAAGACGCCCGGACCGGACGGCTGTTCGCTCAG
ACCAATACCCGGTCGGCAAGCCCGGCGGTGACCCAGCAGGCGGGAGTCACTTCAGCGTCAGCGGCGCCGGCCGCCGATCT
CACCAGCCTCGGCCTTGCGCCGCAGGCGGCGACGCCGACGGCCCAGGAGCGCCAGCTTGCCTTCCTGAGCCAGGCCGTGG
ACCGGCGCACCGTGTCGCCCGACCGCGTGGCGGCTCCTGCCTCCGCCAACATCCTGCAGGCCGGCGCCGTCATCCCCGCG
GCGCTGATCACCGGCATCCGCTCGGACCTGCCGGGCCAGATCACCGCCCAGGTGACCGAGAATGTCCACGATAGCCCGAC
CGGGCGGATCCTCCTGATCCCCCAGGGCACACGCATCATTGGCCAGTATGACAATGGCGTCGGCTTCGGGCAGCGCCGGG
TGCTCCTCGTCTGGAACCGCCTGATCTTCCCCAATGGCCGGTCCATCGTGCTGGAGCGCCAGACCGGAGCCGACGCGGAA
GGCTACGCTGGCCTTGAGGATGGCATCGACTACCATTGGGGCGAGCTGTTCAAGGCGGCGGTGCTCTCGACCATCCTCAG
CGTCGGGGCGAGCGCAGGAACGTCCGGCAGCGATAGCGACCTCGTGAGTGCTTTGCGGGAAGGCGCATCCGACAGCATCA
GCCAGACCGGCCGGCAGCTCGTCCAGCGCCAGCTCAACATTGCGCCGACCCTCACGATCCGGCCGGGATTCCCGGTGCGG
ATCATCGTCACGCGCGACCTCGTTCTTGAATCCTATGGAGGTTGA

Upstream 100 bases:

>100_bases
TGATCGTGGACCGGCTCTTCGCAGCCGCCGAGCTGCGCTTCGGCGCCGACAAGGACCAGAAGCGCGTGCGCATCTCCCGC
ACCGACGGGAGGCCGGTCCT

Downstream 100 bases:

>100_bases
AATGCCGAAGCTGAAGCTCAGCGAGATCCTCGACGACAGGCCGGTGAAGGTGACCGTGGAACTGCCAGCGAAGCTGCACC
GCGATCTTGTCGCCTATGCG

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSGIEPGKETGPELSGDDGARPLTGETVSAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIYALQARKDHGHGQELY
ATDVKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTAVQPTVPTMGGMPNPALSPEEQRQQRESEDARTGRLFAQ
TNTRSASPAVTQQAGVTSASAAPAADLTSLGLAPQAATPTAQERQLAFLSQAVDRRTVSPDRVAAPASANILQAGAVIPA
ALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRVLLVWNRLIFPNGRSIVLERQTGADAE
GYAGLEDGIDYHWGELFKAAVLSTILSVGASAGTSGSDSDLVSALREGASDSISQTGRQLVQRQLNIAPTLTIRPGFPVR
IIVTRDLVLESYGG

Sequences:

>Translated_414_residues
MSGIEPGKETGPELSGDDGARPLTGETVSAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIYALQARKDHGHGQELY
ATDVKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTAVQPTVPTMGGMPNPALSPEEQRQQRESEDARTGRLFAQ
TNTRSASPAVTQQAGVTSASAAPAADLTSLGLAPQAATPTAQERQLAFLSQAVDRRTVSPDRVAAPASANILQAGAVIPA
ALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRVLLVWNRLIFPNGRSIVLERQTGADAE
GYAGLEDGIDYHWGELFKAAVLSTILSVGASAGTSGSDSDLVSALREGASDSISQTGRQLVQRQLNIAPTLTIRPGFPVR
IIVTRDLVLESYGG
>Mature_413_residues
SGIEPGKETGPELSGDDGARPLTGETVSAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIGGALIYALQARKDHGHGQELYA
TDVKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQTAVQPTVPTMGGMPNPALSPEEQRQQRESEDARTGRLFAQT
NTRSASPAVTQQAGVTSASAAPAADLTSLGLAPQAATPTAQERQLAFLSQAVDRRTVSPDRVAAPASANILQAGAVIPAA
LITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRVLLVWNRLIFPNGRSIVLERQTGADAEG
YAGLEDGIDYHWGELFKAAVLSTILSVGASAGTSGSDSDLVSALREGASDSISQTGRQLVQRQLNIAPTLTIRPGFPVRI
IVTRDLVLESYGG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 43189; Mature: 43058

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIEPGKETGPELSGDDGARPLTGETVSAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIG
CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHH
GALIYALQARKDHGHGQELYATDVKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQ
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHCCC
TAVQPTVPTMGGMPNPALSPEEQRQQRESEDARTGRLFAQTNTRSASPAVTQQAGVTSAS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHCCCCCCC
AAPAADLTSLGLAPQAATPTAQERQLAFLSQAVDRRTVSPDRVAAPASANILQAGAVIPA
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHH
ALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRVLLVWNR
HHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEHH
LIFPNGRSIVLERQTGADAEGYAGLEDGIDYHWGELFKAAVLSTILSVGASAGTSGSDSD
HCCCCCCEEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LVSALREGASDSISQTGRQLVQRQLNIAPTLTIRPGFPVRIIVTRDLVLESYGG
HHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHCCCC
>Mature Secondary Structure 
SGIEPGKETGPELSGDDGARPLTGETVSAMRLRPEPPRVTRLSRKVLAGLGLVAGLGIG
CCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHH
GALIYALQARKDHGHGQELYATDVKATPDGLAGLPKDYTGIPKLGPPLPGDLGRPILNAQ
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHCCC
TAVQPTVPTMGGMPNPALSPEEQRQQRESEDARTGRLFAQTNTRSASPAVTQQAGVTSAS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHCCCCCCC
AAPAADLTSLGLAPQAATPTAQERQLAFLSQAVDRRTVSPDRVAAPASANILQAGAVIPA
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHH
ALITGIRSDLPGQITAQVTENVHDSPTGRILLIPQGTRIIGQYDNGVGFGQRRVLLVWNR
HHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEHH
LIFPNGRSIVLERQTGADAEGYAGLEDGIDYHWGELFKAAVLSTILSVGASAGTSGSDSD
HCCCCCCEEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LVSALREGASDSISQTGRQLVQRQLNIAPTLTIRPGFPVRIIVTRDLVLESYGG
HHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]