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The map label for this gene is 154247844

Identifier: 154247844

GI number: 154247844

Start: 4339860

End: 4340807

Strand: Reverse

Name: 154247844

Synonym: Xaut_3921

Alternate gene names: NA

Gene position: 4340807-4339860 (Counterclockwise)

Preceding gene: 154247845

Following gene: 154247842

Centisome position: 81.76

GC content: 69.2

Gene sequence:

>948_bases
ATGCGTCGGCCCATGGACCTGATCTTCAGCGCACTCGCGCCCGTTTTCCTCGTCATCGCGCTCGGTGCCGTGCTGCGCCG
GATCCTGCTGAAGGATCCCGCCCACTGGGCGGCGCTGGAAAAGCTCACCTATTTCGTGCTGTTCCCCGCCCTGCTCGTGG
TCTCGGCAGTCAAGGCCGACCTCAGCAAGGTGAACGTGCTCGCGGTCAGCGGGGCGCTGATCGGCTCGGTGGTGGTGCTC
TCGGGCCTGATTCTGCTCGTCCACCGGCCGCTCATCGCGGCGCTGGCGGCAGACGGACCGGGCTTCACCTCCCTGTTCCA
GGGAGCGGTGCGCTGGAACACCTACATCGTGCTGGCGGTGGCCGGCGGGCTCTACGGGCCGGCGGGCATCACCATCGCGG
CGCTGGCGCTGGTGGCCATGATCCCGGTGGTCAACGTGATTGCCGTGCTGGTGCTGGCGAGCTTCTCCGGCCGCCACCCG
CCCACCTTCGCCTATGTGGCCGAGCAGCTCGCCCGCAATCCCTATATCTGGGCCTGCGCGGCGGGAGCGGCGCTCAATGC
CACCCACTTCCCCGTGCCCAGCGTTCTGCTGGAGTTCGGTGACGTGCTGGGCCGCGCCTCCCTGGCCCTCGGCCTGCTGG
TGGTGGGCGGTGGGCTGGTGCTGGACCGGCTGGCACGGCCGCGTCCCATCGTGCTGGCAAGCCTCGCGCTCAAGCTGTTG
GTAAAGCCGGCTATCGCGCTCCTGCTGGCGCGGGCCTTTGGCCTCTCGGGAACGGAGCTGATGGTGGTGGCCATTACTGC
CTCGGTTCCGTCCGCACCCAACGGCTACGTGCTGGCCCGCCAGATGGGCGGCGACGCACCCTTGCTGGCGGAAATCCTCA
CCCTCCAGATCGTCGCCGCTGCGCTGACGCTGCCGCTGGTGGTGGCGGTGGCGAAGCTCCTGGCCTGA

Upstream 100 bases:

>100_bases
CGGTGGATTTCCCCAATCCGCCCGCCTAAAGGTGGGGCCCCCGGCGGCTCCCGCGCCCCCGAGAGGGACTAATTGCCTGC
CACCGAACGGCAGGCACGCT

Downstream 100 bases:

>100_bases
ACGGCCGGCGCAAAGCATCGGCGCAAAAGCAAAAGGGCGGCCGAAGCCGCCCTTGTCCATCTTGCCGAGAAAGCCCTCTC
GCCTCAGCAGGGCGACCAGT

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Transporter AEC Family; Transmembrane Protein; Permease Transmembrane Protein; Auxin Efflux Carrier Family Protein; Auxin Efflux Carrier Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRRPMDLIFSALAPVFLVIALGAVLRRILLKDPAHWAALEKLTYFVLFPALLVVSAVKADLSKVNVLAVSGALIGSVVVL
SGLILLVHRPLIAALAADGPGFTSLFQGAVRWNTYIVLAVAGGLYGPAGITIAALALVAMIPVVNVIAVLVLASFSGRHP
PTFAYVAEQLARNPYIWACAAGAALNATHFPVPSVLLEFGDVLGRASLALGLLVVGGGLVLDRLARPRPIVLASLALKLL
VKPAIALLLARAFGLSGTELMVVAITASVPSAPNGYVLARQMGGDAPLLAEILTLQIVAAALTLPLVVAVAKLLA

Sequences:

>Translated_315_residues
MRRPMDLIFSALAPVFLVIALGAVLRRILLKDPAHWAALEKLTYFVLFPALLVVSAVKADLSKVNVLAVSGALIGSVVVL
SGLILLVHRPLIAALAADGPGFTSLFQGAVRWNTYIVLAVAGGLYGPAGITIAALALVAMIPVVNVIAVLVLASFSGRHP
PTFAYVAEQLARNPYIWACAAGAALNATHFPVPSVLLEFGDVLGRASLALGLLVVGGGLVLDRLARPRPIVLASLALKLL
VKPAIALLLARAFGLSGTELMVVAITASVPSAPNGYVLARQMGGDAPLLAEILTLQIVAAALTLPLVVAVAKLLA
>Mature_315_residues
MRRPMDLIFSALAPVFLVIALGAVLRRILLKDPAHWAALEKLTYFVLFPALLVVSAVKADLSKVNVLAVSGALIGSVVVL
SGLILLVHRPLIAALAADGPGFTSLFQGAVRWNTYIVLAVAGGLYGPAGITIAALALVAMIPVVNVIAVLVLASFSGRHP
PTFAYVAEQLARNPYIWACAAGAALNATHFPVPSVLLEFGDVLGRASLALGLLVVGGGLVLDRLARPRPIVLASLALKLL
VKPAIALLLARAFGLSGTELMVVAITASVPSAPNGYVLARQMGGDAPLLAEILTLQIVAAALTLPLVVAVAKLLA

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32503; Mature: 32503

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPMDLIFSALAPVFLVIALGAVLRRILLKDPAHWAALEKLTYFVLFPALLVVSAVKAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKVNVLAVSGALIGSVVVLSGLILLVHRPLIAALAADGPGFTSLFQGAVRWNTYIVLAV
HHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEE
AGGLYGPAGITIAALALVAMIPVVNVIAVLVLASFSGRHPPTFAYVAEQLARNPYIWACA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEE
AGAALNATHFPVPSVLLEFGDVLGRASLALGLLVVGGGLVLDRLARPRPIVLASLALKLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH
VKPAIALLLARAFGLSGTELMVVAITASVPSAPNGYVLARQMGGDAPLLAEILTLQIVAA
HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
ALTLPLVVAVAKLLA
HHHHHHHHHHHHHHC
>Mature Secondary Structure
MRRPMDLIFSALAPVFLVIALGAVLRRILLKDPAHWAALEKLTYFVLFPALLVVSAVKAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKVNVLAVSGALIGSVVVLSGLILLVHRPLIAALAADGPGFTSLFQGAVRWNTYIVLAV
HHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEE
AGGLYGPAGITIAALALVAMIPVVNVIAVLVLASFSGRHPPTFAYVAEQLARNPYIWACA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEE
AGAALNATHFPVPSVLLEFGDVLGRASLALGLLVVGGGLVLDRLARPRPIVLASLALKLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH
VKPAIALLLARAFGLSGTELMVVAITASVPSAPNGYVLARQMGGDAPLLAEILTLQIVAA
HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
ALTLPLVVAVAKLLA
HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA