| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247785
Identifier: 154247785
GI number: 154247785
Start: 4278432
End: 4279166
Strand: Reverse
Name: 154247785
Synonym: Xaut_3862
Alternate gene names: NA
Gene position: 4279166-4278432 (Counterclockwise)
Preceding gene: 154247786
Following gene: 154247784
Centisome position: 80.6
GC content: 70.34
Gene sequence:
>735_bases ATGACCGACTTCGCCACGAGGCTGACACAGGCCGAGCGCCGCCAGGACTGGCCCAACGTCCGCCCGCGCGACGCCGCCAC CCTCATCCTCATCGACCACAAGGGCAAGAAGCCCCGCGTGCTCATGGGCCGGCGCCATCCCAAGCTGAAATTCATGCCCG GCGTCTTCGTCTTTCCCGGCGGACGGCTGGAGAAGGCCGACCGGACCATGCCGGTCTATGGCGTGCTCGACGCCGACAGC GAGCGGCGCCTGATGACGAAGGTGCAGCGCCCTACCCTCTCCCGCGCCCGGGGCCTTGCCGCCGCCGCCATCCGCGAGAT GTACGAGGAGACCGGCCTTCTGGTGGGCACCAAGGAGCTCGGCGCCCCTGAGGCCCCCTCCGACGACTGGCGGGTGTTCG AGGAGCGCGGGGTGTTTCCCGATCTCGGCGCCCTCACCTATGTGGCGCGCGCCATCACCCCGCCGCGCCGGCCCAAGCGC TTCGACACCCGCTTCTTCGCCGCCGACGCCCGCGCCGTGTGCGACGAGGTGGCCGGCCTCGTGGGCGAGGAGTCGGAGCT GGTGGAACTCGCCTGGCTCACCTTCGCGGAAACCGCCGCGCAGGAGCTGCCCACCGTCACCCGCGTGGTGCTGGAGGAAC TGGCCCAGCGCATCGAAGCTGGATCGAGCCCGCGCCTGCCGGTGCCCTTCTACGCCATGCACCGTGGACAGTTTGTCCGC ACCCTGCTTGATTGA
Upstream 100 bases:
>100_bases GCCCGTGGTGCGCGCCGTCCGGCCCGTCCGCTGAGGCCTTCGCAGCATTGACACTCCGGACGAACGCCCCAAAAGAACGC CTGATGAGCACTGACGCGCC
Downstream 100 bases:
>100_bases CCCGTATCTTATGCACGCACCTGACAGGCCGCTGGGCCATATGAGCCGCACGGCCTCCATCGCTGCCGCCATTTCCGCCA TCACCGTCGTTGGCGTCGGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; Hydrolase NUDIX Family; NUDIX Family Hydrolase; Hydrolase; Phosphohydrolase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTDFATRLTQAERRQDWPNVRPRDAATLILIDHKGKKPRVLMGRRHPKLKFMPGVFVFPGGRLEKADRTMPVYGVLDADS ERRLMTKVQRPTLSRARGLAAAAIREMYEETGLLVGTKELGAPEAPSDDWRVFEERGVFPDLGALTYVARAITPPRRPKR FDTRFFAADARAVCDEVAGLVGEESELVELAWLTFAETAAQELPTVTRVVLEELAQRIEAGSSPRLPVPFYAMHRGQFVR TLLD
Sequences:
>Translated_244_residues MTDFATRLTQAERRQDWPNVRPRDAATLILIDHKGKKPRVLMGRRHPKLKFMPGVFVFPGGRLEKADRTMPVYGVLDADS ERRLMTKVQRPTLSRARGLAAAAIREMYEETGLLVGTKELGAPEAPSDDWRVFEERGVFPDLGALTYVARAITPPRRPKR FDTRFFAADARAVCDEVAGLVGEESELVELAWLTFAETAAQELPTVTRVVLEELAQRIEAGSSPRLPVPFYAMHRGQFVR TLLD >Mature_243_residues TDFATRLTQAERRQDWPNVRPRDAATLILIDHKGKKPRVLMGRRHPKLKFMPGVFVFPGGRLEKADRTMPVYGVLDADSE RRLMTKVQRPTLSRARGLAAAAIREMYEETGLLVGTKELGAPEAPSDDWRVFEERGVFPDLGALTYVARAITPPRRPKRF DTRFFAADARAVCDEVAGLVGEESELVELAWLTFAETAAQELPTVTRVVLEELAQRIEAGSSPRLPVPFYAMHRGQFVRT LLD
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27458; Mature: 27327
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFATRLTQAERRQDWPNVRPRDAATLILIDHKGKKPRVLMGRRHPKLKFMPGVFVFPG CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCEEECCCEEECCC GRLEKADRTMPVYGVLDADSERRLMTKVQRPTLSRARGLAAAAIREMYEETGLLVGTKEL CCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECHHC GAPEAPSDDWRVFEERGVFPDLGALTYVARAITPPRRPKRFDTRFFAADARAVCDEVAGL CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VGEESELVELAWLTFAETAAQELPTVTRVVLEELAQRIEAGSSPRLPVPFYAMHRGQFVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH TLLD HHCC >Mature Secondary Structure TDFATRLTQAERRQDWPNVRPRDAATLILIDHKGKKPRVLMGRRHPKLKFMPGVFVFPG CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCEEECCCEEECCC GRLEKADRTMPVYGVLDADSERRLMTKVQRPTLSRARGLAAAAIREMYEETGLLVGTKEL CCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEECHHC GAPEAPSDDWRVFEERGVFPDLGALTYVARAITPPRRPKRFDTRFFAADARAVCDEVAGL CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VGEESELVELAWLTFAETAAQELPTVTRVVLEELAQRIEAGSSPRLPVPFYAMHRGQFVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH TLLD HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA