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The map label for this gene is pdhS [H]

Identifier: 154247691

GI number: 154247691

Start: 4173447

End: 4175843

Strand: Reverse

Name: pdhS [H]

Synonym: Xaut_3767

Alternate gene names: 154247691

Gene position: 4175843-4173447 (Counterclockwise)

Preceding gene: 154247703

Following gene: 154247690

Centisome position: 78.66

GC content: 73.51

Gene sequence:

>2397_bases
ATGGACCTACGGCAGCCCATGACGCAGACCAGCGCACGTTCGTTTCCCGGGGTGGATCTCGCCCTTGCGCCGCTGCAGCG
GCAGGATCTGCCATCCTTCCTGGTGGCGGTGCCGTCCGCCCGCGTGCTGGAAGCGACACCGGCGTGCGCCGCCCTTGGAC
TGGTCGCCGGAACCCCCGCGCCCCAGATCGTGGCGACGGCGGCACGGGAGCTGTCGCGCCAGACTCTGGCACGCTTCGGC
TTCGCCCGCCTGCGCCTGCCAGGCAGCTTTGTCCCGCGCCTGTTCCGCTACGCGCCGCTCGCCCTGCCTTCCGGAGCCGC
GGTGCTGTTCGCCGATCCCGCCGCCTTCGCGCCCGCCGCTGGGGCGTCCGGCGAGGCGGCAAGCGCACCCGCCATTCCCG
TGGCGCTTCAGCCCCTGTTCGCCCAGCCGGTGCGCATCACCTTCGAGACCGATGCCGAGGGCCGCATCCGAGCGCTCTCG
TCGGTATTTGCACAAGCCCTCGGATCCCGCGCCGGCCAATTCATGGGCGCGACCTTCGCGGTCCTGGAAAATGAGGGCCT
GCTTCAGTCCGGCGCCGCCGTCGCTGAGGCCATCGCCGGCGGCAGCTTCGCCGATGTGAAGGCCCACGTGCCCACCGCAA
ACACGGACGAGGCCGCGCTCGACCTTTCACTCGGCGGAGCGCCCGTGTTCGATGCCGGGCGCCGGCGCCAGGGCATCCGT
GGTTTTGGCGTGGTGAGCGCAGCCGCCGCATCGCCGCCCGAGTCGCAGCCCCGGCCGGTGCTCCCGGTCCCGCCGCCACC
CGCCGCCGAGTCGGTCGGCTTCGGGGAGAATGTGGTGCCGTTGCGCTCCGGCAGCCTGTCGCCGCAGGAGCGCTCGGCCT
TTCGCGAGATCGCTCGGACACTGGCCGCCGCCATCGAGGACTGGCCGAAGCCGCGTCCCGATCTGCCCCGGCTTGACCCG
CAGCCGGATGCGCCTCTCAACGCCTTGCCGCACGCGGATGGGAACGGCCCTGCCCGCTCCGAGCCGCACGGCATCGCCCA
AGCGCCCGAAGCCGACGCCCCACCCGCATCGGAATATCCAGCCGCAACCGACGACCTCGACCTGCTCGACCATCTGCCCC
TCGGGCTTCTGGTGCAACAGGATGGCGCGGCGACCTTCGCCAACCGCACACTCCTCACCCTGACCGGGTGGGAAGACCTC
GCCGACATCGCGGCGGCCGGCGGGCTCGATGCCCTTCTCGTGCGCGACGGCGCCAGCCTGCATCTTGCTACCGCCGCCGG
CACCCGCCTGCCGGTGGAGGTGCGCCTGGTGGCGGCATCCTTCCTCGGCCGGCCAGCGCTGGTGCATGTCATCCGGCCCC
TGAGCGAGCTGGAAGGCCGCGAGGCCCGCGCCATCGCCCGCCGCGACGCGCTCGACATGGTGCCGTGGCCGCTCTTCCTG
CTGGAACCGGACGGCACCATCCGGTTTGCCAACCAGGCGGCGGCCGAACGGCTCGGCTTTTCTGCGCTGGATCTGGCCGG
CGAGCCTTTCATTGTCGCCGTGGCGCCGCAGGATCGCGCCGCCGTGGTCGCCGCCATGGACCGGGTGGCGGCGGGTGCTG
CCCGCGAACAGGTCACGCTTGCCCTGCGCGACCGCGCCGGCACTGTTTCGCCCGCCCGCGCCGCGCTCACCCGCGCCGGC
GCCGAAGACCAGATGCTGTGCGTGGTGGTGGATCCTCAGTCACCGTCCGCTCCTGCGGCCGCCAGCGAGGGGCCGGACCT
GCTGCCCCGTCTCGCCAGCCGCCTGCGGCAGGCCCTGGCCGCGCCCCTGGCTCGCCTGACCGGTACTTCGACACCGTCCG
CCCTGTCCGGGCCGGAGCGCGAGGCATTCGCCGCCGTCGCGTCGACCCTCGACGACCTCGCAACCCTTGCTGCCGGTCCG
GAAGAGGCCGCGCCCGAACGGTGCGACATCGCCGGGCTGGTGACCCTCACGGTGGCGGCACTCGCACCCGCGGCCCGGCG
CCGGGGCATTGCGCTCCGACTCGATGCGCCCGAGACGGTGACGGTGACGACCCAGCGCCCGCAGGTGACCCGGCTGGCCC
GGCTGATGCTGGAGGAGGCTATTGCCGCAACCCCGGCGGGGGCGAGCGTCAGCGTCTCGGTGTTTGACGACGGCACGGCC
GGCGCCTGCCTTCAGGTCAGCGATGGCGGCGCGGCGCTGGACGAGGTGGCGCTGGCGACGGCGCACGATCCGCTCGCGCC
CCTTCCCGCCCCGGCCGCCGACCGCTTCGCCGCTTCCGGACGCCCCCTTCGGCTGGCGCGTCTCGCCCGGGAGGCCGAAC
AGCTCGGCGGGGTTCTTGATGTGGCGCCGGAGCCGGCCCGCGGCATGATCGCCCGCCTGCGCCTTCCGCAGCGATAG

Upstream 100 bases:

>100_bases
ATATGAATGCCGAAAAAGCGCTCCAATTGCACTGACGTTAATCAATCGTCATGACTATGGGCAGCGCTCCGCCTTGCAGA
ATCGGCCCGCACCCGGCGGA

Downstream 100 bases:

>100_bases
AGTCTCGCGATTTTCCGGTGGCGAGACACCATCTGGGCGGGTTTAGAAAATAGAATTACTCCATTGTGGTACCCCGAAGT
CTTTCGAGACCTCGGCGGGA

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 798; Mature: 798

Protein sequence:

>798_residues
MDLRQPMTQTSARSFPGVDLALAPLQRQDLPSFLVAVPSARVLEATPACAALGLVAGTPAPQIVATAARELSRQTLARFG
FARLRLPGSFVPRLFRYAPLALPSGAAVLFADPAAFAPAAGASGEAASAPAIPVALQPLFAQPVRITFETDAEGRIRALS
SVFAQALGSRAGQFMGATFAVLENEGLLQSGAAVAEAIAGGSFADVKAHVPTANTDEAALDLSLGGAPVFDAGRRRQGIR
GFGVVSAAAASPPESQPRPVLPVPPPPAAESVGFGENVVPLRSGSLSPQERSAFREIARTLAAAIEDWPKPRPDLPRLDP
QPDAPLNALPHADGNGPARSEPHGIAQAPEADAPPASEYPAATDDLDLLDHLPLGLLVQQDGAATFANRTLLTLTGWEDL
ADIAAAGGLDALLVRDGASLHLATAAGTRLPVEVRLVAASFLGRPALVHVIRPLSELEGREARAIARRDALDMVPWPLFL
LEPDGTIRFANQAAAERLGFSALDLAGEPFIVAVAPQDRAAVVAAMDRVAAGAAREQVTLALRDRAGTVSPARAALTRAG
AEDQMLCVVVDPQSPSAPAAASEGPDLLPRLASRLRQALAAPLARLTGTSTPSALSGPEREAFAAVASTLDDLATLAAGP
EEAAPERCDIAGLVTLTVAALAPAARRRGIALRLDAPETVTVTTQRPQVTRLARLMLEEAIAATPAGASVSVSVFDDGTA
GACLQVSDGGAALDEVALATAHDPLAPLPAPAADRFAASGRPLRLARLAREAEQLGGVLDVAPEPARGMIARLRLPQR

Sequences:

>Translated_798_residues
MDLRQPMTQTSARSFPGVDLALAPLQRQDLPSFLVAVPSARVLEATPACAALGLVAGTPAPQIVATAARELSRQTLARFG
FARLRLPGSFVPRLFRYAPLALPSGAAVLFADPAAFAPAAGASGEAASAPAIPVALQPLFAQPVRITFETDAEGRIRALS
SVFAQALGSRAGQFMGATFAVLENEGLLQSGAAVAEAIAGGSFADVKAHVPTANTDEAALDLSLGGAPVFDAGRRRQGIR
GFGVVSAAAASPPESQPRPVLPVPPPPAAESVGFGENVVPLRSGSLSPQERSAFREIARTLAAAIEDWPKPRPDLPRLDP
QPDAPLNALPHADGNGPARSEPHGIAQAPEADAPPASEYPAATDDLDLLDHLPLGLLVQQDGAATFANRTLLTLTGWEDL
ADIAAAGGLDALLVRDGASLHLATAAGTRLPVEVRLVAASFLGRPALVHVIRPLSELEGREARAIARRDALDMVPWPLFL
LEPDGTIRFANQAAAERLGFSALDLAGEPFIVAVAPQDRAAVVAAMDRVAAGAAREQVTLALRDRAGTVSPARAALTRAG
AEDQMLCVVVDPQSPSAPAAASEGPDLLPRLASRLRQALAAPLARLTGTSTPSALSGPEREAFAAVASTLDDLATLAAGP
EEAAPERCDIAGLVTLTVAALAPAARRRGIALRLDAPETVTVTTQRPQVTRLARLMLEEAIAATPAGASVSVSVFDDGTA
GACLQVSDGGAALDEVALATAHDPLAPLPAPAADRFAASGRPLRLARLAREAEQLGGVLDVAPEPARGMIARLRLPQR
>Mature_798_residues
MDLRQPMTQTSARSFPGVDLALAPLQRQDLPSFLVAVPSARVLEATPACAALGLVAGTPAPQIVATAARELSRQTLARFG
FARLRLPGSFVPRLFRYAPLALPSGAAVLFADPAAFAPAAGASGEAASAPAIPVALQPLFAQPVRITFETDAEGRIRALS
SVFAQALGSRAGQFMGATFAVLENEGLLQSGAAVAEAIAGGSFADVKAHVPTANTDEAALDLSLGGAPVFDAGRRRQGIR
GFGVVSAAAASPPESQPRPVLPVPPPPAAESVGFGENVVPLRSGSLSPQERSAFREIARTLAAAIEDWPKPRPDLPRLDP
QPDAPLNALPHADGNGPARSEPHGIAQAPEADAPPASEYPAATDDLDLLDHLPLGLLVQQDGAATFANRTLLTLTGWEDL
ADIAAAGGLDALLVRDGASLHLATAAGTRLPVEVRLVAASFLGRPALVHVIRPLSELEGREARAIARRDALDMVPWPLFL
LEPDGTIRFANQAAAERLGFSALDLAGEPFIVAVAPQDRAAVVAAMDRVAAGAAREQVTLALRDRAGTVSPARAALTRAG
AEDQMLCVVVDPQSPSAPAAASEGPDLLPRLASRLRQALAAPLARLTGTSTPSALSGPEREAFAAVASTLDDLATLAAGP
EEAAPERCDIAGLVTLTVAALAPAARRRGIALRLDAPETVTVTTQRPQVTRLARLMLEEAIAATPAGASVSVSVFDDGTA
GACLQVSDGGAALDEVALATAHDPLAPLPAPAADRFAASGRPLRLARLAREAEQLGGVLDVAPEPARGMIARLRLPQR

Specific function: Functions as a polar differentiation marker. Essential protein that, by localizing in the old pole of dividing cells, controls cell division and maturation, probably through control of DivK phosphorylation status and cellular distribution, which in turn r

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Note=Localizes at the old pole of dividing cells. Colocalizes with divK (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 82071; Mature: 82071

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRQPMTQTSARSFPGVDLALAPLQRQDLPSFLVAVPSARVLEATPACAALGLVAGTPA
CCCCCCHHHHHCCCCCCCCEEECCCCHHCCCHHHHHCCCCHHHHCCCHHHHHHHHCCCCC
PQIVATAARELSRQTLARFGFARLRLPGSFVPRLFRYAPLALPSGAAVLFADPAAFAPAA
HHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCCC
GASGEAASAPAIPVALQPLFAQPVRITFETDAEGRIRALSSVFAQALGSRAGQFMGATFA
CCCCCCCCCCCCCHHHCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
VLENEGLLQSGAAVAEAIAGGSFADVKAHVPTANTDEAALDLSLGGAPVFDAGRRRQGIR
EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHCCCCC
GFGVVSAAAASPPESQPRPVLPVPPPPAAESVGFGENVVPLRSGSLSPQERSAFREIART
CCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LAAAIEDWPKPRPDLPRLDPQPDAPLNALPHADGNGPARSEPHGIAQAPEADAPPASEYP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AATDDLDLLDHLPLGLLVQQDGAATFANRTLLTLTGWEDLADIAAAGGLDALLVRDGASL
CCCCCHHHHHCCCCCEEEECCCCCEECCCEEEEEECHHHHHHHHHHCCCEEEEEECCCCE
HLATAAGTRLPVEVRLVAASFLGRPALVHVIRPLSELEGREARAIARRDALDMVPWPLFL
EEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEE
LEPDGTIRFANQAAAERLGFSALDLAGEPFIVAVAPQDRAAVVAAMDRVAAGAAREQVTL
ECCCCCEEECHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEE
ALRDRAGTVSPARAALTRAGAEDQMLCVVVDPQSPSAPAAASEGPDLLPRLASRLRQALA
EEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
APLARLTGTSTPSALSGPEREAFAAVASTLDDLATLAAGPEEAAPERCDIAGLVTLTVAA
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH
LAPAARRRGIALRLDAPETVTVTTQRPQVTRLARLMLEEAIAATPAGASVSVSVFDDGTA
HHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
GACLQVSDGGAALDEVALATAHDPLAPLPAPAADRFAASGRPLRLARLAREAEQLGGVLD
CEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEE
VAPEPARGMIARLRLPQR
CCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MDLRQPMTQTSARSFPGVDLALAPLQRQDLPSFLVAVPSARVLEATPACAALGLVAGTPA
CCCCCCHHHHHCCCCCCCCEEECCCCHHCCCHHHHHCCCCHHHHCCCHHHHHHHHCCCCC
PQIVATAARELSRQTLARFGFARLRLPGSFVPRLFRYAPLALPSGAAVLFADPAAFAPAA
HHHHHHHHHHHHHHHHHHHCHHHEECCHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCCC
GASGEAASAPAIPVALQPLFAQPVRITFETDAEGRIRALSSVFAQALGSRAGQFMGATFA
CCCCCCCCCCCCCHHHCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
VLENEGLLQSGAAVAEAIAGGSFADVKAHVPTANTDEAALDLSLGGAPVFDAGRRRQGIR
EEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHCCCCC
GFGVVSAAAASPPESQPRPVLPVPPPPAAESVGFGENVVPLRSGSLSPQERSAFREIART
CCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LAAAIEDWPKPRPDLPRLDPQPDAPLNALPHADGNGPARSEPHGIAQAPEADAPPASEYP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AATDDLDLLDHLPLGLLVQQDGAATFANRTLLTLTGWEDLADIAAAGGLDALLVRDGASL
CCCCCHHHHHCCCCCEEEECCCCCEECCCEEEEEECHHHHHHHHHHCCCEEEEEECCCCE
HLATAAGTRLPVEVRLVAASFLGRPALVHVIRPLSELEGREARAIARRDALDMVPWPLFL
EEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEE
LEPDGTIRFANQAAAERLGFSALDLAGEPFIVAVAPQDRAAVVAAMDRVAAGAAREQVTL
ECCCCCEEECHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEE
ALRDRAGTVSPARAALTRAGAEDQMLCVVVDPQSPSAPAAASEGPDLLPRLASRLRQALA
EEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
APLARLTGTSTPSALSGPEREAFAAVASTLDDLATLAAGPEEAAPERCDIAGLVTLTVAA
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH
LAPAARRRGIALRLDAPETVTVTTQRPQVTRLARLMLEEAIAATPAGASVSVSVFDDGTA
HHHHHHHCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
GACLQVSDGGAALDEVALATAHDPLAPLPAPAADRFAASGRPLRLARLAREAEQLGGVLD
CEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEE
VAPEPARGMIARLRLPQR
CCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA