| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247539
Identifier: 154247539
GI number: 154247539
Start: 4032755
End: 4033405
Strand: Reverse
Name: 154247539
Synonym: Xaut_3612
Alternate gene names: NA
Gene position: 4033405-4032755 (Counterclockwise)
Preceding gene: 154247587
Following gene: 154247538
Centisome position: 75.97
GC content: 61.75
Gene sequence:
>651_bases ATGGGCGTGTCTCGTGGGCAATTCATCAAGTTGGAACGCGGCGAGCGTGGACTAACCGAGCGAACGATCGATTTGGCGGC CAAAGCGTTCGAGGTGACGAAGGCTGAAGTGCTCGGGCAATCCCAGGGCGGGAACGAAGGAACGGCAGACTCTCCCTCGG CCGAGCTGGTTCGGGTCACGCAGGGATCGACGATCCCGGTTGCCGGCACGGTCGAGGCAGGCACCTTCCGCGAAGCCGAC GACAGCAACCAGGACGAACCTGAGTTCGTGCCCGCCGAGCCGGACAAGCGCTGGCCTGACGCAAGACAGGTCGCATTCCG AGTTGCCGGCGATAGCATGAATGCACTGAAGCCAGTGCCGATCCTAGAAGGCGCGACCCTGATCTGTGTCGACTACGAGG ACATTGCCGACCGTCACCCGCTACGGAACGGAATGATCGTGGTCGTCGAGCGGGCGGCACTTGGCGGCCAGATGCGAGAA TGGTCGGTCAAGCAGCTCGAGGTGCTGGACGATCGGTTCGTGTTCCATCCTCGGTCGACCAGCCAGAAGCACAAGCCGAT CGTCGTGACAACGGACTTTGAGGCGGACGACGGCATGGTCGTGAGCGTGCTGGCAATTGTTCGGGGGATCCTCAATCGGA TAACCGAATGA
Upstream 100 bases:
>100_bases TTCGAAATCCCCCGGTAGGGTAAAACTCATTCCAATGGGAAACGCTCTTCGCGACCTTCGACTGGCAAAGGGGTGGACGC ACGACGAGGCGGCCGAGCGC
Downstream 100 bases:
>100_bases CACACCGCCATCAGGGGGGCGGCTTATGGTGGACATTGCAGAATTTGCCGATGCCGGTGAACTAAGCCTGTATTTTGATA CCAAGCCGGGCCAATTGGCC
Product: putative prophage repressor
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Peptidase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MGVSRGQFIKLERGERGLTERTIDLAAKAFEVTKAEVLGQSQGGNEGTADSPSAELVRVTQGSTIPVAGTVEAGTFREAD DSNQDEPEFVPAEPDKRWPDARQVAFRVAGDSMNALKPVPILEGATLICVDYEDIADRHPLRNGMIVVVERAALGGQMRE WSVKQLEVLDDRFVFHPRSTSQKHKPIVVTTDFEADDGMVVSVLAIVRGILNRITE
Sequences:
>Translated_216_residues MGVSRGQFIKLERGERGLTERTIDLAAKAFEVTKAEVLGQSQGGNEGTADSPSAELVRVTQGSTIPVAGTVEAGTFREAD DSNQDEPEFVPAEPDKRWPDARQVAFRVAGDSMNALKPVPILEGATLICVDYEDIADRHPLRNGMIVVVERAALGGQMRE WSVKQLEVLDDRFVFHPRSTSQKHKPIVVTTDFEADDGMVVSVLAIVRGILNRITE >Mature_215_residues GVSRGQFIKLERGERGLTERTIDLAAKAFEVTKAEVLGQSQGGNEGTADSPSAELVRVTQGSTIPVAGTVEAGTFREADD SNQDEPEFVPAEPDKRWPDARQVAFRVAGDSMNALKPVPILEGATLICVDYEDIADRHPLRNGMIVVVERAALGGQMREW SVKQLEVLDDRFVFHPRSTSQKHKPIVVTTDFEADDGMVVSVLAIVRGILNRITE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23598; Mature: 23467
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSRGQFIKLERGERGLTERTIDLAAKAFEVTKAEVLGQSQGGNEGTADSPSAELVRVT CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE QGSTIPVAGTVEAGTFREADDSNQDEPEFVPAEPDKRWPDARQVAFRVAGDSMNALKPVP CCCEECEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCC ILEGATLICVDYEDIADRHPLRNGMIVVVERAALGGQMREWSVKQLEVLDDRFVFHPRST EECCCEEEEEEHHHHHCCCCCCCCEEEEEECCHHCCCCHHCCHHHHHHHCCCEEECCCCC SQKHKPIVVTTDFEADDGMVVSVLAIVRGILNRITE CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVSRGQFIKLERGERGLTERTIDLAAKAFEVTKAEVLGQSQGGNEGTADSPSAELVRVT CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE QGSTIPVAGTVEAGTFREADDSNQDEPEFVPAEPDKRWPDARQVAFRVAGDSMNALKPVP CCCEECEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCC ILEGATLICVDYEDIADRHPLRNGMIVVVERAALGGQMREWSVKQLEVLDDRFVFHPRST EECCCEEEEEEHHHHHCCCCCCCCEEEEEECCHHCCCCHHCCHHHHHHHCCCEEECCCCC SQKHKPIVVTTDFEADDGMVVSVLAIVRGILNRITE CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA