| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is pcoA [H]
Identifier: 154247515
GI number: 154247515
Start: 4010827
End: 4012095
Strand: Reverse
Name: pcoA [H]
Synonym: Xaut_3588
Alternate gene names: 154247515
Gene position: 4012095-4010827 (Counterclockwise)
Preceding gene: 154247522
Following gene: 154247513
Centisome position: 75.57
GC content: 72.5
Gene sequence:
>1269_bases GTGACGACGCCGATTCCCTCCCGACGCACCGTCCTCAAGGGTGCTGCAGCCCTCTCCCTGTCCGGCGCGGCGGGCGCGCT CGTGCCGGCGCTCGCGCAATCGCCGGCCGCTGCGCAGGCGGCGGCGCCCCCCGCCGCGCAGGCCACCCCCCCGGTGACGC TCACCGCCGCCGAAGGCAGCCTACCGGAGCTGGCCGGACCGGGGCCGCTCGCCCTATTCAACGGCGCCCTCCCCGGCCCG GTGCTGCGGGTGAAGAAGGGCGGCATGCTAAATGTCACCCTCGCCAACAGCCTGAAAGAAAACGTCGCCCTGACCTGGCA GGGCGTGCGGCTGCCAGCGGGTTCGCCCGCGCTGGCGTCGGTCGCGCCCGGCAAGAGCGCCAACCTCAGTCTCGTGGCCA CGGATGCCGGCACGTTCTGGTATCATGCGACCTCGCCTAGCCTCGCCCGCCGCGCCCTTGCCGGCCCGCTGGTGGTGGAG GAGGCCGGCGCCTCGGCCTATGCGGCGGACCACCTGTTGTTCATCCAGTCGTTTCCGCCGGAGAGCGGGGTGCCCATCTT TCCGGTCAACGGCGCTATCTCGCCCACCTTCCAGGGTCCGGCCGGCGGGCGCGCCCGGCTGCGGCTGGTGAACGCGACCC CGCTGTTCCTGCGCCTGAAGATTCGCGGGCCGGCGAGCTATGCCATCGCGGTGGACGGCCAGCCCGTGTCCGAGCCCTTC GAACTGAAGGACGGCCGCATCCAGATCGCCCCCGGCGGCCGGGTGGACGTGGCGGCGACGCTGGACGACGCCGACGCCAC CATCATCGAGATCGAGACCACGCAGGACCCCATCCGGCTGGCGGTGGTGACCCCGGTGGGCGCCGCCGTCACGCCACCGA CCGGGGCGCCGGCGCCGCTGCCGCCCAACGACCTGCCGGCCGAGATCCCCCTCAAGGACGCCCTGCGCATCGAGCTGCCC ATCGGCGACAAGCCGGGCGCGGGGGCAGCCTCCCTCGGCACCGTGAAGGCCGGCAAGAGCGTGGTGCTGACACTGGTGAA CAGCCTCGACGCGCCGGTGTCGGTCTATATCGCCGGTCATCCCGTGCGCCTGCTGGACAATGTCTATGACGGCTGGCGGC CGTGGTGGCACGACACCGTGCCGGTGCCGTCAAAGGCCACAGTGCGGGTAGCGTTCCGCGCCGCCCAGCCGGGCACCTGG TCCATCATCGGCCAGCGCGGCGGCGACGGCGAGGTGGTGGTCTCCAAGACCTATGAAGTGACGGCCTGA
Upstream 100 bases:
>100_bases CCCAGGAACCTGCTTAGGCCGTGAAAATCAGCGGTGGAAAGCCGCTTGCCCTTTTTCCAGCCACGTATGAAGGTCCACGC ACCCTGCCAGGAGACGCCGC
Downstream 100 bases:
>100_bases GGCCCGGAGAATTTTCCGCGAGCGACCAGGACGGCCCGGGCTGTCCTGGTCACCGCACCCCGAGCGTTTCGTACAGCCGG CGGTAGACCTCGCGCAGCGC
Product: multicopper oxidase type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTTPIPSRRTVLKGAAALSLSGAAGALVPALAQSPAAAQAAAPPAAQATPPVTLTAAEGSLPELAGPGPLALFNGALPGP VLRVKKGGMLNVTLANSLKENVALTWQGVRLPAGSPALASVAPGKSANLSLVATDAGTFWYHATSPSLARRALAGPLVVE EAGASAYAADHLLFIQSFPPESGVPIFPVNGAISPTFQGPAGGRARLRLVNATPLFLRLKIRGPASYAIAVDGQPVSEPF ELKDGRIQIAPGGRVDVAATLDDADATIIEIETTQDPIRLAVVTPVGAAVTPPTGAPAPLPPNDLPAEIPLKDALRIELP IGDKPGAGAASLGTVKAGKSVVLTLVNSLDAPVSVYIAGHPVRLLDNVYDGWRPWWHDTVPVPSKATVRVAFRAAQPGTW SIIGQRGGDGEVVVSKTYEVTA
Sequences:
>Translated_422_residues MTTPIPSRRTVLKGAAALSLSGAAGALVPALAQSPAAAQAAAPPAAQATPPVTLTAAEGSLPELAGPGPLALFNGALPGP VLRVKKGGMLNVTLANSLKENVALTWQGVRLPAGSPALASVAPGKSANLSLVATDAGTFWYHATSPSLARRALAGPLVVE EAGASAYAADHLLFIQSFPPESGVPIFPVNGAISPTFQGPAGGRARLRLVNATPLFLRLKIRGPASYAIAVDGQPVSEPF ELKDGRIQIAPGGRVDVAATLDDADATIIEIETTQDPIRLAVVTPVGAAVTPPTGAPAPLPPNDLPAEIPLKDALRIELP IGDKPGAGAASLGTVKAGKSVVLTLVNSLDAPVSVYIAGHPVRLLDNVYDGWRPWWHDTVPVPSKATVRVAFRAAQPGTW SIIGQRGGDGEVVVSKTYEVTA >Mature_421_residues TTPIPSRRTVLKGAAALSLSGAAGALVPALAQSPAAAQAAAPPAAQATPPVTLTAAEGSLPELAGPGPLALFNGALPGPV LRVKKGGMLNVTLANSLKENVALTWQGVRLPAGSPALASVAPGKSANLSLVATDAGTFWYHATSPSLARRALAGPLVVEE AGASAYAADHLLFIQSFPPESGVPIFPVNGAISPTFQGPAGGRARLRLVNATPLFLRLKIRGPASYAIAVDGQPVSEPFE LKDGRIQIAPGGRVDVAATLDDADATIIEIETTQDPIRLAVVTPVGAAVTPPTGAPAPLPPNDLPAEIPLKDALRIELPI GDKPGAGAASLGTVKAGKSVVLTLVNSLDAPVSVYIAGHPVRLLDNVYDGWRPWWHDTVPVPSKATVRVAFRAAQPGTWS IIGQRGGDGEVVVSKTYEVTA
Specific function: Required for the copper-inducible expression of copper resistance. May have oxidase activity [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family. CopA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789394, Length=372, Percent_Identity=25.2688172043011, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR006376 - InterPro: IPR002355 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 42966; Mature: 42834
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPIPSRRTVLKGAAALSLSGAAGALVPALAQSPAAAQAAAPPAAQATPPVTLTAAEGS CCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEECCCC LPELAGPGPLALFNGALPGPVLRVKKGGMLNVTLANSLKENVALTWQGVRLPAGSPALAS CCCCCCCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEE VAPGKSANLSLVATDAGTFWYHATSPSLARRALAGPLVVEEAGASAYAADHLLFIQSFPP ECCCCCCCEEEEEECCCEEEEEECCHHHHHHHHCCCEEEECCCCCCEECEEEEEEECCCC ESGVPIFPVNGAISPTFQGPAGGRARLRLVNATPLFLRLKIRGPASYAIAVDGQPVSEPF CCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCC ELKDGRIQIAPGGRVDVAATLDDADATIIEIETTQDPIRLAVVTPVGAAVTPPTGAPAPL CCCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCCCCCC PPNDLPAEIPLKDALRIELPIGDKPGAGAASLGTVKAGKSVVLTLVNSLDAPVSVYIAGH CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEHHCCCCCEEEEECCC PVRLLDNVYDGWRPWWHDTVPVPSKATVRVAFRAAQPGTWSIIGQRGGDGEVVVSKTYEV CHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEE TA CC >Mature Secondary Structure TTPIPSRRTVLKGAAALSLSGAAGALVPALAQSPAAAQAAAPPAAQATPPVTLTAAEGS CCCCCCCHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEEECCCC LPELAGPGPLALFNGALPGPVLRVKKGGMLNVTLANSLKENVALTWQGVRLPAGSPALAS CCCCCCCCCEEEECCCCCCCEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCEE VAPGKSANLSLVATDAGTFWYHATSPSLARRALAGPLVVEEAGASAYAADHLLFIQSFPP ECCCCCCCEEEEEECCCEEEEEECCHHHHHHHHCCCEEEECCCCCCEECEEEEEEECCCC ESGVPIFPVNGAISPTFQGPAGGRARLRLVNATPLFLRLKIRGPASYAIAVDGQPVSEPF CCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCC ELKDGRIQIAPGGRVDVAATLDDADATIIEIETTQDPIRLAVVTPVGAAVTPPTGAPAPL CCCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEECCCCCCCCCC PPNDLPAEIPLKDALRIELPIGDKPGAGAASLGTVKAGKSVVLTLVNSLDAPVSVYIAGH CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEHHCCCCCEEEEECCC PVRLLDNVYDGWRPWWHDTVPVPSKATVRVAFRAAQPGTWSIIGQRGGDGEVVVSKTYEV CHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEE TA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8594334 [H]