Click here to switch to the map view.

The map label for this gene is yjeF [C]

Identifier: 154247514

GI number: 154247514

Start: 4009287

End: 4010777

Strand: Direct

Name: yjeF [C]

Synonym: Xaut_3587

Alternate gene names: 154247514

Gene position: 4009287-4010777 (Clockwise)

Preceding gene: 154247511

Following gene: 154247516

Centisome position: 75.52

GC content: 74.71

Gene sequence:

>1491_bases
GTGCACGCACTTCTCGATCCACAGGAAATGGGTCAGGCAGATCGACTCGCCACCGAAATGGGCACGCCGTCCTTCACGCT
TATGGAGCGGGCGGGCACCGCGGTGGCCGACGTGGTGGCGCGGTTTCCGCTGCCGACCCGCGTCGTGGTCCTGTGCGGGC
CGGGCAACAATGGCGGCGACGGTTTCGTTGCGGCACGGGTGCTGACGCAGCGGGGCTTCCGGGTGCGGGTCGCCCTGCTG
GGCGAGCGCGACAAGCTGGGAGGGGACGCAAGGCGCGCCGCCGAGCGCTGGCGCGGGCCGGTGGAGGAGCCGGCCGTCCT
CGATCTCACCGAGGCCGGGGTGATCGTCGATGCCCTCTACGGTGCCGGCCTCGCCCGTGATCTCGACGGCGCGGCAAAGG
CGCTGGTGATGCGCATGGCCGCCTCCGGCCGGCCCATCGTCGCCGTGGACCTGCCCTCCGGCCTCGACGGCGCCACCGGC
AAGGTGCGTGGCGCGGCGGCGCAGGCGCAGGAGACGGTCACCTTCTTCCGTCGCAAGCCCGGCCACCTGCTGGAGCCGGG
GCGCAGCCTGTGCGGGCGGGTGCGGGTGGCGGACATCGGGATTCCCGACGCGGTGCTGGATGTGATCAGGCCCGCCACCT
CCGTGAACATGCCGGAGCTGTGGCGCCCGGCATTTCCGCTGCCGTCGGCGCTGGGCCACAAATATGATCGCGGCCATGCG
GTGGTGGTCAGCGGCGGCGCCTGGACTTCGGGCGCCGCCCGCCTCTCGGCCCGCGGGGCATTCAGGGCCGGGGCCGGGCT
GGTGACGGTGGCCCTGCCGCCGGACGCCCTGCCGCTGCATGCCGCGTCCTATGCCGCCATCATGCCCCGTCCCATGGCCT
GCGACGACGACCTCGCCACCCTGCTCGCCGACCGGAGGCTCGGCACCGTGGTGCTGGGGCCGGGCCTCGGCATGGGGGCG
GCGACGCGGGCAAAGATCGACATCGCCGCGCCGGGCCGGCGCCTTGTGCTGGATGCGGACGCGCTCACCTCCTACGCGGG
CGTGCCCTGGGCGCTGGCGGATGTGGCTGCGCGCACGGCGGGCCTCATCATTACCCCCCACGAGGGCGAGTTCGCCCGTC
TGTTCGCCGGGGATCGGGCGGTGCTGGAGGCGCCCTCCAAGCTGGCACGCACCCGCGCGGCGGCGGCGCGGCTGGGCGCC
GTGGTGGTGCTGAAGGGGGCGGATACGGTGGTCGCGGCCCCCGACGGGCACGCCGCCATCGCGGAAAATGCGCCGCCCTG
GCTCGCCACCGCGGGGGCCGGAGACGTGCTGGCCGGCATGGCGGGGGGACTTCTGGCCCAGGCCATGCCGGCGTTCGAGG
CCGCCGCGGCCGCCGTGTGGCTGCACGGGGAGGCCGCCCGCGTCGCCGGGCCGGGCCTCGTGGCCGACGATTTGCCGGAG
GCGCTGCGCGAGGTCTACCGCCGGCTGTACGAAACGCTCGGGGTGCGGTGA

Upstream 100 bases:

>100_bases
GCTCATGAAATAGGCTTAATGACTTTAAATTAGGCGATTTATATCTTCATTGCGTGCGTTCGCTGAGTATCAACTGGGCA
TTAGAGAGGCAGGGCATCAC

Downstream 100 bases:

>100_bases
CCAGGACAGCCCGGGCCGTCCTGGTCGCTCGCGGAAAATTCTCCGGGCCTCAGGCCGTCACTTCATAGGTCTTGGAGACC
ACCACCTCGCCGTCGCCGCC

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MHALLDPQEMGQADRLATEMGTPSFTLMERAGTAVADVVARFPLPTRVVVLCGPGNNGGDGFVAARVLTQRGFRVRVALL
GERDKLGGDARRAAERWRGPVEEPAVLDLTEAGVIVDALYGAGLARDLDGAAKALVMRMAASGRPIVAVDLPSGLDGATG
KVRGAAAQAQETVTFFRRKPGHLLEPGRSLCGRVRVADIGIPDAVLDVIRPATSVNMPELWRPAFPLPSALGHKYDRGHA
VVVSGGAWTSGAARLSARGAFRAGAGLVTVALPPDALPLHAASYAAIMPRPMACDDDLATLLADRRLGTVVLGPGLGMGA
ATRAKIDIAAPGRRLVLDADALTSYAGVPWALADVAARTAGLIITPHEGEFARLFAGDRAVLEAPSKLARTRAAAARLGA
VVVLKGADTVVAAPDGHAAIAENAPPWLATAGAGDVLAGMAGGLLAQAMPAFEAAAAAVWLHGEAARVAGPGLVADDLPE
ALREVYRRLYETLGVR

Sequences:

>Translated_496_residues
MHALLDPQEMGQADRLATEMGTPSFTLMERAGTAVADVVARFPLPTRVVVLCGPGNNGGDGFVAARVLTQRGFRVRVALL
GERDKLGGDARRAAERWRGPVEEPAVLDLTEAGVIVDALYGAGLARDLDGAAKALVMRMAASGRPIVAVDLPSGLDGATG
KVRGAAAQAQETVTFFRRKPGHLLEPGRSLCGRVRVADIGIPDAVLDVIRPATSVNMPELWRPAFPLPSALGHKYDRGHA
VVVSGGAWTSGAARLSARGAFRAGAGLVTVALPPDALPLHAASYAAIMPRPMACDDDLATLLADRRLGTVVLGPGLGMGA
ATRAKIDIAAPGRRLVLDADALTSYAGVPWALADVAARTAGLIITPHEGEFARLFAGDRAVLEAPSKLARTRAAAARLGA
VVVLKGADTVVAAPDGHAAIAENAPPWLATAGAGDVLAGMAGGLLAQAMPAFEAAAAAVWLHGEAARVAGPGLVADDLPE
ALREVYRRLYETLGVR
>Mature_496_residues
MHALLDPQEMGQADRLATEMGTPSFTLMERAGTAVADVVARFPLPTRVVVLCGPGNNGGDGFVAARVLTQRGFRVRVALL
GERDKLGGDARRAAERWRGPVEEPAVLDLTEAGVIVDALYGAGLARDLDGAAKALVMRMAASGRPIVAVDLPSGLDGATG
KVRGAAAQAQETVTFFRRKPGHLLEPGRSLCGRVRVADIGIPDAVLDVIRPATSVNMPELWRPAFPLPSALGHKYDRGHA
VVVSGGAWTSGAARLSARGAFRAGAGLVTVALPPDALPLHAASYAAIMPRPMACDDDLATLLADRRLGTVVLGPGLGMGA
ATRAKIDIAAPGRRLVLDADALTSYAGVPWALADVAARTAGLIITPHEGEFARLFAGDRAVLEAPSKLARTRAAAARLGA
VVVLKGADTVVAAPDGHAAIAENAPPWLATAGAGDVLAGMAGGLLAQAMPAFEAAAAAVWLHGEAARVAGPGLVADDLPE
ALREVYRRLYETLGVR

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=501, Percent_Identity=33.1337325349301, Blast_Score=182, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17509719, Length=148, Percent_Identity=35.8108108108108, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51092; Mature: 51092

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHALLDPQEMGQADRLATEMGTPSFTLMERAGTAVADVVARFPLPTRVVVLCGPGNNGGD
CCCCCCHHHCCCHHHHHHHCCCCCEEHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCC
GFVAARVLTQRGFRVRVALLGERDKLGGDARRAAERWRGPVEEPAVLDLTEAGVIVDALY
HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHCCHHHHHHH
GAGLARDLDGAAKALVMRMAASGRPIVAVDLPSGLDGATGKVRGAAAQAQETVTFFRRKP
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
GHLLEPGRSLCGRVRVADIGIPDAVLDVIRPATSVNMPELWRPAFPLPSALGHKYDRGHA
CCCCCCCHHHHCEEEEEECCCCHHHHHHHCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCE
VVVSGGAWTSGAARLSARGAFRAGAGLVTVALPPDALPLHAASYAAIMPRPMACDDDLAT
EEEECCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHH
LLADRRLGTVVLGPGLGMGAATRAKIDIAAPGRRLVLDADALTSYAGVPWALADVAARTA
HHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHC
GLIITPHEGEFARLFAGDRAVLEAPSKLARTRAAAARLGAVVVLKGADTVVAAPDGHAAI
CEEEECCCCCEEEEECCCHHHHHCHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCEEE
AENAPPWLATAGAGDVLAGMAGGLLAQAMPAFEAAAAAVWLHGEAARVAGPGLVADDLPE
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCHHHHHH
ALREVYRRLYETLGVR
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHALLDPQEMGQADRLATEMGTPSFTLMERAGTAVADVVARFPLPTRVVVLCGPGNNGGD
CCCCCCHHHCCCHHHHHHHCCCCCEEHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCC
GFVAARVLTQRGFRVRVALLGERDKLGGDARRAAERWRGPVEEPAVLDLTEAGVIVDALY
HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHCCHHHHHHH
GAGLARDLDGAAKALVMRMAASGRPIVAVDLPSGLDGATGKVRGAAAQAQETVTFFRRKP
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
GHLLEPGRSLCGRVRVADIGIPDAVLDVIRPATSVNMPELWRPAFPLPSALGHKYDRGHA
CCCCCCCHHHHCEEEEEECCCCHHHHHHHCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCE
VVVSGGAWTSGAARLSARGAFRAGAGLVTVALPPDALPLHAASYAAIMPRPMACDDDLAT
EEEECCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHH
LLADRRLGTVVLGPGLGMGAATRAKIDIAAPGRRLVLDADALTSYAGVPWALADVAARTA
HHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHC
GLIITPHEGEFARLFAGDRAVLEAPSKLARTRAAAARLGAVVVLKGADTVVAAPDGHAAI
CEEEECCCCCEEEEECCCHHHHHCHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCEEE
AENAPPWLATAGAGDVLAGMAGGLLAQAMPAFEAAAAAVWLHGEAARVAGPGLVADDLPE
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCHHHHHH
ALREVYRRLYETLGVR
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]