| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is wcaL [C]
Identifier: 154247498
GI number: 154247498
Start: 3993206
End: 3994399
Strand: Direct
Name: wcaL [C]
Synonym: Xaut_3571
Alternate gene names: 154247498
Gene position: 3993206-3994399 (Clockwise)
Preceding gene: 154247497
Following gene: 154247501
Centisome position: 75.22
GC content: 69.18
Gene sequence:
>1194_bases ATGCGCATCGCCCTGTTCAACGCGCTCTATCCGACGCCGCTCCAGCCGAAGATCTTCGGTGGCGCGGAGGTGCTCGTGCG GCAGATCGCCGAACGTCTCGTGGCCCAGGGCGACGAGGTCACGGTGGTGCGCCTTTCGCTGGACGGGATCCGCCAGACCG AAGAGGCCAACGGCGTGCGCGTGGAATTCGTGCCGATCCGCAACCTCTTCACCCCGTTCGGGCCGCGGCATAACACGCTG GCCCATCTCGCCTGGCACGTCATCGACGACTGGTTCGTCGCACCGGGCGAGATCGCCGGCATTCTCGACGGCTTTCGACC GCAGGTCGTGCACTCCCACACCCTCAACGGCCTGAACGCCCACATCTGGCACCTGGCGCGGGACCGGGGCGTGCCCGTGG TCCACACCCTGCACGATTACTATCTCGTTTGTCCGCGCTGCTCGCGCTTCAAGGGCGAGGCCCCTTGCGCGGTGACTTGC GGCAGCTGTGCCGCCCTCACCGTTCGCCGCCGGCAGCGCGCCGGGCTCGTGAATGCGGTGGTGGGCGTGAGCCAACGGAC GCTCGACATCCACCTTGACGCGGGGCTGTTCGCGGATGCCGCCCGCCACGTCATCCGCAACGTGCCCAATCCGGACATCA CATTCGTGCCCATGGACCTGCCGGGGCGGCCGTTGCGGGTGGGATACCTGGGGCGCTTCTCGCCGGAAAAGGGCGTGCGC CTGCTGGTCGAGGCGGCGGGGCGCCTGCCGCCGGGGACGGTAAAGCTCGTGCTCGCCGGCAATGTCTCCCAGGAGGAGCG AGCGGCGCTCGCCGCGCTGGCGCCGCAGACCGAGCTGGATTTCGTCGGCTTCGTGGCGCCGAAGGATTTCTACGCCCAGG TGGACGTGGCCGCAGTGCCCTCGATCTGGGAAGAGCCGGGCGCCCTCGTCCTGCTGGACGCGCTGGCCGCCGGCCGTCCG GTGCTCGCGACGGCCTTCGGCGGTTTGCCGGAAATGTTCGCGGACGGCCTCACAGGATGGACCGTGCAGCCGGATGCCGA GAGCCTCGCCAGCACCATCGGCCGACTCGTGGACACGCCCGCCTTGGTGCTGGACGCCCACCGGCGCCTTGAAGCGCATC GCTCCCGGAACCTTGGCGACATGGTCGCCAGCTATTCGCAGATCTATCGCGATCTGGCGCGGCTTCCCGCCTGA
Upstream 100 bases:
>100_bases CGGCATTCCGGCGCGGATCATTCCGGCCGCCGTGCCCGAGGTTGTGGCTGGCGCCGACCCTCTCGTCGCCTCCGCCCTCT GACCGCGGGGCGGCTCGACC
Downstream 100 bases:
>100_bases TCAGATCAGACGGCATCAGGTCAGGCGGGCTTCTGCTCGCGCACCTGCCGCATGTTCTTGCGGCATCGTCTGGCCGCAGC CGGCGTCGATGCTCAGCGCG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: ORF8 [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRIALFNALYPTPLQPKIFGGAEVLVRQIAERLVAQGDEVTVVRLSLDGIRQTEEANGVRVEFVPIRNLFTPFGPRHNTL AHLAWHVIDDWFVAPGEIAGILDGFRPQVVHSHTLNGLNAHIWHLARDRGVPVVHTLHDYYLVCPRCSRFKGEAPCAVTC GSCAALTVRRRQRAGLVNAVVGVSQRTLDIHLDAGLFADAARHVIRNVPNPDITFVPMDLPGRPLRVGYLGRFSPEKGVR LLVEAAGRLPPGTVKLVLAGNVSQEERAALAALAPQTELDFVGFVAPKDFYAQVDVAAVPSIWEEPGALVLLDALAAGRP VLATAFGGLPEMFADGLTGWTVQPDAESLASTIGRLVDTPALVLDAHRRLEAHRSRNLGDMVASYSQIYRDLARLPA
Sequences:
>Translated_397_residues MRIALFNALYPTPLQPKIFGGAEVLVRQIAERLVAQGDEVTVVRLSLDGIRQTEEANGVRVEFVPIRNLFTPFGPRHNTL AHLAWHVIDDWFVAPGEIAGILDGFRPQVVHSHTLNGLNAHIWHLARDRGVPVVHTLHDYYLVCPRCSRFKGEAPCAVTC GSCAALTVRRRQRAGLVNAVVGVSQRTLDIHLDAGLFADAARHVIRNVPNPDITFVPMDLPGRPLRVGYLGRFSPEKGVR LLVEAAGRLPPGTVKLVLAGNVSQEERAALAALAPQTELDFVGFVAPKDFYAQVDVAAVPSIWEEPGALVLLDALAAGRP VLATAFGGLPEMFADGLTGWTVQPDAESLASTIGRLVDTPALVLDAHRRLEAHRSRNLGDMVASYSQIYRDLARLPA >Mature_397_residues MRIALFNALYPTPLQPKIFGGAEVLVRQIAERLVAQGDEVTVVRLSLDGIRQTEEANGVRVEFVPIRNLFTPFGPRHNTL AHLAWHVIDDWFVAPGEIAGILDGFRPQVVHSHTLNGLNAHIWHLARDRGVPVVHTLHDYYLVCPRCSRFKGEAPCAVTC GSCAALTVRRRQRAGLVNAVVGVSQRTLDIHLDAGLFADAARHVIRNVPNPDITFVPMDLPGRPLRVGYLGRFSPEKGVR LLVEAAGRLPPGTVKLVLAGNVSQEERAALAALAPQTELDFVGFVAPKDFYAQVDVAAVPSIWEEPGALVLLDALAAGRP VLATAFGGLPEMFADGLTGWTVQPDAESLASTIGRLVDTPALVLDAHRRLEAHRSRNLGDMVASYSQIYRDLARLPA
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 43128; Mature: 43128
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALFNALYPTPLQPKIFGGAEVLVRQIAERLVAQGDEVTVVRLSLDGIRQTEEANGVR CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEE VEFVPIRNLFTPFGPRHNTLAHLAWHVIDDWFVAPGEIAGILDGFRPQVVHSHTLNGLNA EEEEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCCCCCH HIWHLARDRGVPVVHTLHDYYLVCPRCSRFKGEAPCAVTCGSCAALTVRRRQRAGLVNAV HHHHHHHCCCCCEEEEECCCEEECCCHHCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHH VGVSQRTLDIHLDAGLFADAARHVIRNVPNPDITFVPMDLPGRPLRVGYLGRFSPEKGVR HCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHH LLVEAAGRLPPGTVKLVLAGNVSQEERAALAALAPQTELDFVGFVAPKDFYAQVDVAAVP HHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHEEECHHHCC SIWEEPGALVLLDALAAGRPVLATAFGGLPEMFADGLTGWTVQPDAESLASTIGRLVDTP HHHCCCCCEEEEEHHHCCCCEEHHHHCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHCCC ALVLDAHRRLEAHRSRNLGDMVASYSQIYRDLARLPA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIALFNALYPTPLQPKIFGGAEVLVRQIAERLVAQGDEVTVVRLSLDGIRQTEEANGVR CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCEE VEFVPIRNLFTPFGPRHNTLAHLAWHVIDDWFVAPGEIAGILDGFRPQVVHSHTLNGLNA EEEEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCCCCCH HIWHLARDRGVPVVHTLHDYYLVCPRCSRFKGEAPCAVTCGSCAALTVRRRQRAGLVNAV HHHHHHHCCCCCEEEEECCCEEECCCHHCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHH VGVSQRTLDIHLDAGLFADAARHVIRNVPNPDITFVPMDLPGRPLRVGYLGRFSPEKGVR HCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHH LLVEAAGRLPPGTVKLVLAGNVSQEERAALAALAPQTELDFVGFVAPKDFYAQVDVAAVP HHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHEEECHHHCC SIWEEPGALVLLDALAAGRPVLATAFGGLPEMFADGLTGWTVQPDAESLASTIGRLVDTP HHHCCCCCEEEEEHHHCCCCEEHHHHCCCHHHHHCCCCCCEECCCHHHHHHHHHHHHCCC ALVLDAHRRLEAHRSRNLGDMVASYSQIYRDLARLPA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]