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The map label for this gene is rfbU [H]

Identifier: 154247493

GI number: 154247493

Start: 3981972

End: 3983144

Strand: Reverse

Name: rfbU [H]

Synonym: Xaut_3566

Alternate gene names: 154247493

Gene position: 3983144-3981972 (Counterclockwise)

Preceding gene: 154247495

Following gene: 154247492

Centisome position: 75.03

GC content: 69.22

Gene sequence:

>1173_bases
ATGCCTTTCCGCCAGGCCGGTGGACCCGGCAAGCGTGCTCTTTCCACGCTAGTGCGCATGACCGTCATGCCCACAATCTT
CGTCAACGGCCGCTTCATCGGCCGGCCCGTGACCGGCGTCGAACGGTTTGCGACCCTCGTCCTGAAGGAAATCGTCGCGC
GCGCCCGGACGGAGCCCGCATTGCGCTGGACTGTCCTTGCCCCAACCGGTGTGGAACGGCCCGAGTGGCTCGGCCCCCTG
CCCTTCCGCACGGTCGGCCGACTGTCCGGGCATCCCTGGGAGCAGACGGAGCTGTTCTGGGCAAGCAGGAATGGCACCCT
CGTCAATCTGTGCAATTCGGGGCCCGTGCTCCACGGCCGCCAGTTGACGGTCATCCACGACGCGCTGGTCTATCGTCATC
CGGAGAACTTCTCCCGCCGCTACGGCACCGTGCACCGCCAGCTCGGGCGTCTGCTGGCGCGGCGCGCCCGGCTGGCGACG
GTTTCCGAGTTCTCGCGGCGGGAACTGTCGGCTCTGCTCGGCGTGCCCGCCGGATCCATCGCGGTCATCCCCAACGCGGT
GGACCACATGGCGGAGATCGAGCCCGATGTCTCGGTGCTGGACCGCTTCGGACTTCAGGGCAAGCGCTTCCTGCTGGCCG
TGGGCTCGCCGGCGCCCAACAAGAACCTCGCCCGTGCGGTCCGCGCGTTTCTGGCGCTGGACTGCGACGACATCTCCTTT
GTCCTGGTGGGAAAGGCCGCCGCCGCATTCGCCCGCTCCGATGTCGGCACCACCCACCCGAACGTCGTGGCGACCGGGCG
ACTGAGCGACGGCGAGGTGCAGGCGCTCTATCGCAGCGCCGTCGCGCTGGTCTTTCCCAGCATCTATGAGGGCTTCGGCA
TCCCGCCGCTGGAGGCGATGACGGCCGGCTGCCCGGTCCTGGCTGCCGATATCCCTCCCGTCCGGGAAGTCTGCGCCGAC
GCCGCGCTCTATTTCGATCCCCTCGACGAGGCATCCATGGCCGATGCCATGCGCCGGTGCGCGAACCCTGCGTTCGACGG
CGCCGCACTGCGCGAGGCCGGCTACCTCAGGACGCGCGCATTCTCCTGGGAGGACAGCGCGCGCCGGCTGCTCGACGCGC
TGCGCCCGCTTGAAGCCGCCTCCCTTTCTCCCGAACACGCCGGTGGCCGGTGA

Upstream 100 bases:

>100_bases
CGCATGCAAACGCATCCACTGCCAGCGTCTACCGCAACACCGGCGGCGTGCGCCCGAGCACCACGATAAAACTGCGCCGC
CCTCGTTACCGCATTGCAGC

Downstream 100 bases:

>100_bases
GGCCGCCCCACCTGCGCCGCGAGCGGATGAAGCCCGCGGGCCGGCGCGGACGACTTTTGCCTGAAGGACATCGCCCATGC
GATTTTTGAAGCGCTTCAAC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPFRQAGGPGKRALSTLVRMTVMPTIFVNGRFIGRPVTGVERFATLVLKEIVARARTEPALRWTVLAPTGVERPEWLGPL
PFRTVGRLSGHPWEQTELFWASRNGTLVNLCNSGPVLHGRQLTVIHDALVYRHPENFSRRYGTVHRQLGRLLARRARLAT
VSEFSRRELSALLGVPAGSIAVIPNAVDHMAEIEPDVSVLDRFGLQGKRFLLAVGSPAPNKNLARAVRAFLALDCDDISF
VLVGKAAAAFARSDVGTTHPNVVATGRLSDGEVQALYRSAVALVFPSIYEGFGIPPLEAMTAGCPVLAADIPPVREVCAD
AALYFDPLDEASMADAMRRCANPAFDGAALREAGYLRTRAFSWEDSARRLLDALRPLEAASLSPEHAGGR

Sequences:

>Translated_390_residues
MPFRQAGGPGKRALSTLVRMTVMPTIFVNGRFIGRPVTGVERFATLVLKEIVARARTEPALRWTVLAPTGVERPEWLGPL
PFRTVGRLSGHPWEQTELFWASRNGTLVNLCNSGPVLHGRQLTVIHDALVYRHPENFSRRYGTVHRQLGRLLARRARLAT
VSEFSRRELSALLGVPAGSIAVIPNAVDHMAEIEPDVSVLDRFGLQGKRFLLAVGSPAPNKNLARAVRAFLALDCDDISF
VLVGKAAAAFARSDVGTTHPNVVATGRLSDGEVQALYRSAVALVFPSIYEGFGIPPLEAMTAGCPVLAADIPPVREVCAD
AALYFDPLDEASMADAMRRCANPAFDGAALREAGYLRTRAFSWEDSARRLLDALRPLEAASLSPEHAGGR
>Mature_389_residues
PFRQAGGPGKRALSTLVRMTVMPTIFVNGRFIGRPVTGVERFATLVLKEIVARARTEPALRWTVLAPTGVERPEWLGPLP
FRTVGRLSGHPWEQTELFWASRNGTLVNLCNSGPVLHGRQLTVIHDALVYRHPENFSRRYGTVHRQLGRLLARRARLATV
SEFSRRELSALLGVPAGSIAVIPNAVDHMAEIEPDVSVLDRFGLQGKRFLLAVGSPAPNKNLARAVRAFLALDCDDISFV
LVGKAAAAFARSDVGTTHPNVVATGRLSDGEVQALYRSAVALVFPSIYEGFGIPPLEAMTAGCPVLAADIPPVREVCADA
ALYFDPLDEASMADAMRRCANPAFDGAALREAGYLRTRAFSWEDSARRLLDALRPLEAASLSPEHAGGR

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 42330; Mature: 42199

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFRQAGGPGKRALSTLVRMTVMPTIFVNGRFIGRPVTGVERFATLVLKEIVARARTEPA
CCCCCCCCCHHHHHHHHHHHHHHCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
LRWTVLAPTGVERPEWLGPLPFRTVGRLSGHPWEQTELFWASRNGTLVNLCNSGPVLHGR
EEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCEECCC
QLTVIHDALVYRHPENFSRRYGTVHRQLGRLLARRARLATVSEFSRRELSALLGVPAGSI
EEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AVIPNAVDHMAEIEPDVSVLDRFGLQGKRFLLAVGSPAPNKNLARAVRAFLALDCDDISF
EECCHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
VLVGKAAAAFARSDVGTTHPNVVATGRLSDGEVQALYRSAVALVFPSIYEGFGIPPLEAM
EEEHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TAGCPVLAADIPPVREVCADAALYFDPLDEASMADAMRRCANPAFDGAALREAGYLRTRA
HCCCCEEECCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHEE
FSWEDSARRLLDALRPLEAASLSPEHAGGR
CCCHHHHHHHHHHHCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
PFRQAGGPGKRALSTLVRMTVMPTIFVNGRFIGRPVTGVERFATLVLKEIVARARTEPA
CCCCCCCCHHHHHHHHHHHHHHCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
LRWTVLAPTGVERPEWLGPLPFRTVGRLSGHPWEQTELFWASRNGTLVNLCNSGPVLHGR
EEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCEECCC
QLTVIHDALVYRHPENFSRRYGTVHRQLGRLLARRARLATVSEFSRRELSALLGVPAGSI
EEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AVIPNAVDHMAEIEPDVSVLDRFGLQGKRFLLAVGSPAPNKNLARAVRAFLALDCDDISF
EECCHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
VLVGKAAAAFARSDVGTTHPNVVATGRLSDGEVQALYRSAVALVFPSIYEGFGIPPLEAM
EEEHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TAGCPVLAADIPPVREVCADAALYFDPLDEASMADAMRRCANPAFDGAALREAGYLRTRA
HCCCCEEECCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHEE
FSWEDSARRLLDALRPLEAASLSPEHAGGR
CCCHHHHHHHHHHHCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]