| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247490
Identifier: 154247490
GI number: 154247490
Start: 3978661
End: 3980007
Strand: Direct
Name: 154247490
Synonym: Xaut_3563
Alternate gene names: NA
Gene position: 3978661-3980007 (Clockwise)
Preceding gene: 154247489
Following gene: 154247494
Centisome position: 74.94
GC content: 53.23
Gene sequence:
>1347_bases ATGAGAGGTGTCGCATCGGCAAGGAAGGAGTCGGACCTTCTCTATCTGTTCATGGTCATCGCATTCCTGTTGTTTGCGAC GCGCGATGGTTTGACCGGGGCCGTTCGCTATTTTCTCTCCCTCGTGCATCTCGATATGCTCTGGTTCGTTCCGGACCTGA TGGCGTTTGCGTTGGTCGTTGTTTTTGCCTATCAGCAGATCTTTGTAAAACGAAACCCGATTGGGATTATGTTCGTTTTC GCCTTCATATTTTCTCTCGGTGTCAGTGTCTATTTTATGAAGAGTGACGTGTTGGCCTTTGTGTCGACGATCAAAAGTTT TACGCCGATGTTTATCGGATTTTGTTTTTACAATCGATCGATCACCGAACGGCGCTGGGTCAGGTGGTTCCTGATAGCTC TGCTCGCCGCATCTATTGTGGGCCTGATCCTCAACCGCTTTGTCGAGTATCCGTGGGCCGGTCAGACCATCACCGCCTTT GGCGTGGAAAAGCAGGCGAGCAAACTCTGGTGGCAGGGGGGCGAAGTCCGCTACGGCGGGTTTGCCGGTGACAGCACCAT GGCCGCCTATATGGTGGTGTTCATCTACGCGCTGCTGTCGCCCTATATGAGCCTTGCCGTCAATGTCGCCCTGTGGCCGT TCATGGGGTGGGCCATTCAGACGTCAACGAGCAAGACCGCGCTTGGTATCTTTGTTATCTATGTGATGATGTTCATCTTT GCCAGGTTGCTGAAGTATCCTGAGCGGATCAAAACCTTCCTTCGGCGCACGGCCTTGTGGTCATTCCTGGCCCTGCTTCT TCCTCCCGTGCTCATGCTGGCCCTGTCTGGGGTTAGCCTGGAGGATTTGTCTCCGACCCTTATGAGTATGGCTGACCGCA TCAACAACACATGGCAGCAGCCGTTCGAGACGGTCGCGGAATTGTTCCCTGTAGGACTGGTGTTGGGTTGTGGCATCGGA TGTTTTGCTTATCCCATGCAATATACGCCTATGGCGGACTATCATGTTCCGCTCGACAATTTTTACATGACGACATTCAT AATGATGGGGTTTCCGTTTCTTGTAACCGTTTTGTATCAAATTTACAGCGTTCGTTACATCAAGGATCCCGTTCGTTTGT CTTTGATCACTCTGTTCAATTTGTACAGCATTACGGTCCAATGCTACGGCCCGTCGTTCGCGACGCTGATGTACGGCTAT ATTTTCAGCGAGATGTTCGGCATGGCTTGGCGGCTTGAACGAAGGATCCAGCCCATGCCGACGATCGCTTCCAGCCTGGG CGTCGCGACCTCGTGGAGTGGAGGCGGCGACGTGGGGCTCAAGGCCGGGCGGCAGCCTGCGCGGTAA
Upstream 100 bases:
>100_bases CAGGGGTGGTGCTCTGTTCCTCCTGCGTGCGATGGGGGGTGACGTTTTGGGTGCCGCAGGGTGAGCGGCGCGCGGTCAGA TTTGGAAGCGAGGGATCGTT
Downstream 100 bases:
>100_bases GGGCATCGGTCGGCGTGGCGATGCGGATCACCCGGCCTGGGTTGCCCACGACCACGCCACCGTCCGGGACATCCTTGATC ACGACCGAACTCGCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MRGVASARKESDLLYLFMVIAFLLFATRDGLTGAVRYFLSLVHLDMLWFVPDLMAFALVVVFAYQQIFVKRNPIGIMFVF AFIFSLGVSVYFMKSDVLAFVSTIKSFTPMFIGFCFYNRSITERRWVRWFLIALLAASIVGLILNRFVEYPWAGQTITAF GVEKQASKLWWQGGEVRYGGFAGDSTMAAYMVVFIYALLSPYMSLAVNVALWPFMGWAIQTSTSKTALGIFVIYVMMFIF ARLLKYPERIKTFLRRTALWSFLALLLPPVLMLALSGVSLEDLSPTLMSMADRINNTWQQPFETVAELFPVGLVLGCGIG CFAYPMQYTPMADYHVPLDNFYMTTFIMMGFPFLVTVLYQIYSVRYIKDPVRLSLITLFNLYSITVQCYGPSFATLMYGY IFSEMFGMAWRLERRIQPMPTIASSLGVATSWSGGGDVGLKAGRQPAR
Sequences:
>Translated_448_residues MRGVASARKESDLLYLFMVIAFLLFATRDGLTGAVRYFLSLVHLDMLWFVPDLMAFALVVVFAYQQIFVKRNPIGIMFVF AFIFSLGVSVYFMKSDVLAFVSTIKSFTPMFIGFCFYNRSITERRWVRWFLIALLAASIVGLILNRFVEYPWAGQTITAF GVEKQASKLWWQGGEVRYGGFAGDSTMAAYMVVFIYALLSPYMSLAVNVALWPFMGWAIQTSTSKTALGIFVIYVMMFIF ARLLKYPERIKTFLRRTALWSFLALLLPPVLMLALSGVSLEDLSPTLMSMADRINNTWQQPFETVAELFPVGLVLGCGIG CFAYPMQYTPMADYHVPLDNFYMTTFIMMGFPFLVTVLYQIYSVRYIKDPVRLSLITLFNLYSITVQCYGPSFATLMYGY IFSEMFGMAWRLERRIQPMPTIASSLGVATSWSGGGDVGLKAGRQPAR >Mature_448_residues MRGVASARKESDLLYLFMVIAFLLFATRDGLTGAVRYFLSLVHLDMLWFVPDLMAFALVVVFAYQQIFVKRNPIGIMFVF AFIFSLGVSVYFMKSDVLAFVSTIKSFTPMFIGFCFYNRSITERRWVRWFLIALLAASIVGLILNRFVEYPWAGQTITAF GVEKQASKLWWQGGEVRYGGFAGDSTMAAYMVVFIYALLSPYMSLAVNVALWPFMGWAIQTSTSKTALGIFVIYVMMFIF ARLLKYPERIKTFLRRTALWSFLALLLPPVLMLALSGVSLEDLSPTLMSMADRINNTWQQPFETVAELFPVGLVLGCGIG CFAYPMQYTPMADYHVPLDNFYMTTFIMMGFPFLVTVLYQIYSVRYIKDPVRLSLITLFNLYSITVQCYGPSFATLMYGY IFSEMFGMAWRLERRIQPMPTIASSLGVATSWSGGGDVGLKAGRQPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50824; Mature: 50824
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVASARKESDLLYLFMVIAFLLFATRDGLTGAVRYFLSLVHLDMLWFVPDLMAFALVV CCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAYQQIFVKRNPIGIMFVFAFIFSLGVSVYFMKSDVLAFVSTIKSFTPMFIGFCFYNRS HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ITERRWVRWFLIALLAASIVGLILNRFVEYPWAGQTITAFGVEKQASKLWWQGGEVRYGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCEEECC FAGDSTMAAYMVVFIYALLSPYMSLAVNVALWPFMGWAIQTSTSKTALGIFVIYVMMFIF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCHHHHHHHHHHHHHHHH ARLLKYPERIKTFLRRTALWSFLALLLPPVLMLALSGVSLEDLSPTLMSMADRINNTWQQ HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH PFETVAELFPVGLVLGCGIGCFAYPMQYTPMADYHVPLDNFYMTTFIMMGFPFLVTVLYQ HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IYSVRYIKDPVRLSLITLFNLYSITVQCYGPSFATLMYGYIFSEMFGMAWRLERRIQPMP HHHHHHHCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TIASSLGVATSWSGGGDVGLKAGRQPAR HHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGVASARKESDLLYLFMVIAFLLFATRDGLTGAVRYFLSLVHLDMLWFVPDLMAFALVV CCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAYQQIFVKRNPIGIMFVFAFIFSLGVSVYFMKSDVLAFVSTIKSFTPMFIGFCFYNRS HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ITERRWVRWFLIALLAASIVGLILNRFVEYPWAGQTITAFGVEKQASKLWWQGGEVRYGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCEEECC FAGDSTMAAYMVVFIYALLSPYMSLAVNVALWPFMGWAIQTSTSKTALGIFVIYVMMFIF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCHHHHHHHHHHHHHHHH ARLLKYPERIKTFLRRTALWSFLALLLPPVLMLALSGVSLEDLSPTLMSMADRINNTWQQ HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH PFETVAELFPVGLVLGCGIGCFAYPMQYTPMADYHVPLDNFYMTTFIMMGFPFLVTVLYQ HHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IYSVRYIKDPVRLSLITLFNLYSITVQCYGPSFATLMYGYIFSEMFGMAWRLERRIQPMP HHHHHHHCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TIASSLGVATSWSGGGDVGLKAGRQPAR HHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA