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The map label for this gene is yfgC [C]

Identifier: 154247426

GI number: 154247426

Start: 3894512

End: 3895939

Strand: Direct

Name: yfgC [C]

Synonym: Xaut_3498

Alternate gene names: 154247426

Gene position: 3894512-3895939 (Clockwise)

Preceding gene: 154247423

Following gene: 154247427

Centisome position: 73.36

GC content: 68.28

Gene sequence:

>1428_bases
ATGCCCATGCCTTCTTCATCCCCGTCTTTTCTGTCGGTCGGCCGGGCCTTGGCCCGCGGCCTGTGCCTTGCGGCGGCCGT
GGTGCTGCCGATCCAGGTGGCACTGGCGCAGGAGCAGGCCCGCAAAGGGCCAAGCACCATCCGCGACACCGAGATCGAGG
CGCTGCTGAAGGACTATACCCGCCCCATCCTCAAGACCGCCGGCCTCGGCCAGCAGAATGTCGAGGTGGTGCTGATTTCC
GAGCGGTCGTTCAATGCGTTCGTGGCCGACGGCAAGCGCATCTTCGTCAACACCGGCGCGCTGGTTGATTCGACCACGCC
CAACCAGATCATCGGCGTGCTCGCCCACGAGACCGGCCACATCGCCGGCGGCCACCTTGCCCGCATGCGCGAGCAGCTGG
CCGGGGCCCAGACCATGGCCATCGTCGCCATGCTGCTGGCGGCGGGCGGCATGGCTGCGGGTGCGGCCGGCGGCATGAAC
GGGCGCGACCTCGGCAATGTGGGCGGCGCGGCCCTGTCGGCGCCCCAGGAACTGATCCGCCGCTCGCTCCTTAACTACCA
GCGGGGCGAGGAGGCGGCAGCCGACCGCTCGGCGGTGAAGTATCTGGATGCCACGCACCAGTCGGCCAAAGGCATGCTGG
AGACCTTCCAGCGCTTCCAGAACGACCAGCTCTTCATCAGCCAGCGGGTCGATCCCTACACGCTGAGCCATCCCATGGCG
CGCGAGCGTATCGCCGCGCTGGAACAGCTCGCCAAGGCCAGCCCTTATTACGAGGCCAAGGACCCGCCCGCGCTCCAGGC
CCGTCACGACATGATGCGGGCCAAGCTCATCGGCTTCATGGAGCGGCCGGAGACGGTGGCGCGGCGCTATCCCGCCTCCG
ACACCTCCATCGCGGCGCAATATGCGCGGGCGATCTCGGCCTATCGCTTCGGTAATGTGAATGGCTCGGTGGCCCAGATC
GACGCGCTCATCGCCCGCGATCCGTCCAACCCCTATTTCTACGAGCTGAAGGGCCAGGCCCTGCTGGAGGCTGGGCGGGC
CACCGAATCGGTTGCCCCGTTGCGCAAGGCGGTGGCCATGACCAACGGTGCCCCGCTCATCCGCTCCATGCTCGGGCAGG
CGCTGGTGCAGGCGGGCAATCCCTCCTACACCCAGGAGGCGATTCGCGAGCTGGTGCAGGCCACCCAGCGCGATCCAAAT
TCCGCCTCGGCCTGGCGGTCCCTCTCCCTGGCCTACGGCCGCTCCGGCGACCTCGCCAACGCCGACCTCGCCGCAGCACA
GAGCAGTTTCGCCGAGGGCGAGTTCAAGCTCGGGCGCGAGCTTGCCGCCCGCGCCCGCCAACGTTTTCCGCAGGGCTCGC
CGGGCTGGTTGCAGGCCGATGACCTGGTGAACTTCAAACCGCCCAAAAGCGCCGCCAACCAGCAGTGA

Upstream 100 bases:

>100_bases
TGGTATCGTTGATGTCGCCGCGACCGGATGCATGCGCCGCCACCGGCATGGGGTGGCGCGGACCAGAGGGATCGAGGAAA
CGGATCGAAGCCGAGCGATA

Downstream 100 bases:

>100_bases
CACCCTTTCACCCCATGGAGATCTGAATGCCCCCCCATCTGGGCTCGCCCCTCACCAGCCTGCGGCGCCTCGCCCCCCGG
CTTTTCACGCTGGCGCTGGC

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MPMPSSSPSFLSVGRALARGLCLAAAVVLPIQVALAQEQARKGPSTIRDTEIEALLKDYTRPILKTAGLGQQNVEVVLIS
ERSFNAFVADGKRIFVNTGALVDSTTPNQIIGVLAHETGHIAGGHLARMREQLAGAQTMAIVAMLLAAGGMAAGAAGGMN
GRDLGNVGGAALSAPQELIRRSLLNYQRGEEAAADRSAVKYLDATHQSAKGMLETFQRFQNDQLFISQRVDPYTLSHPMA
RERIAALEQLAKASPYYEAKDPPALQARHDMMRAKLIGFMERPETVARRYPASDTSIAAQYARAISAYRFGNVNGSVAQI
DALIARDPSNPYFYELKGQALLEAGRATESVAPLRKAVAMTNGAPLIRSMLGQALVQAGNPSYTQEAIRELVQATQRDPN
SASAWRSLSLAYGRSGDLANADLAAAQSSFAEGEFKLGRELAARARQRFPQGSPGWLQADDLVNFKPPKSAANQQ

Sequences:

>Translated_475_residues
MPMPSSSPSFLSVGRALARGLCLAAAVVLPIQVALAQEQARKGPSTIRDTEIEALLKDYTRPILKTAGLGQQNVEVVLIS
ERSFNAFVADGKRIFVNTGALVDSTTPNQIIGVLAHETGHIAGGHLARMREQLAGAQTMAIVAMLLAAGGMAAGAAGGMN
GRDLGNVGGAALSAPQELIRRSLLNYQRGEEAAADRSAVKYLDATHQSAKGMLETFQRFQNDQLFISQRVDPYTLSHPMA
RERIAALEQLAKASPYYEAKDPPALQARHDMMRAKLIGFMERPETVARRYPASDTSIAAQYARAISAYRFGNVNGSVAQI
DALIARDPSNPYFYELKGQALLEAGRATESVAPLRKAVAMTNGAPLIRSMLGQALVQAGNPSYTQEAIRELVQATQRDPN
SASAWRSLSLAYGRSGDLANADLAAAQSSFAEGEFKLGRELAARARQRFPQGSPGWLQADDLVNFKPPKSAANQQ
>Mature_474_residues
PMPSSSPSFLSVGRALARGLCLAAAVVLPIQVALAQEQARKGPSTIRDTEIEALLKDYTRPILKTAGLGQQNVEVVLISE
RSFNAFVADGKRIFVNTGALVDSTTPNQIIGVLAHETGHIAGGHLARMREQLAGAQTMAIVAMLLAAGGMAAGAAGGMNG
RDLGNVGGAALSAPQELIRRSLLNYQRGEEAAADRSAVKYLDATHQSAKGMLETFQRFQNDQLFISQRVDPYTLSHPMAR
ERIAALEQLAKASPYYEAKDPPALQARHDMMRAKLIGFMERPETVARRYPASDTSIAAQYARAISAYRFGNVNGSVAQID
ALIARDPSNPYFYELKGQALLEAGRATESVAPLRKAVAMTNGAPLIRSMLGQALVQAGNPSYTQEAIRELVQATQRDPNS
ASAWRSLSLAYGRSGDLANADLAAAQSSFAEGEFKLGRELAARARQRFPQGSPGWLQADDLVNFKPPKSAANQQ

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=352, Percent_Identity=24.7159090909091, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 50886; Mature: 50755

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMPSSSPSFLSVGRALARGLCLAAAVVLPIQVALAQEQARKGPSTIRDTEIEALLKDYT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RPILKTAGLGQQNVEVVLISERSFNAFVADGKRIFVNTGALVDSTTPNQIIGVLAHETGH
HHHHHHCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCEECCCCHHHHHHHHHHCCCC
IAGGHLARMREQLAGAQTMAIVAMLLAAGGMAAGAAGGMNGRDLGNVGGAALSAPQELIR
CCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
RSLLNYQRGEEAAADRSAVKYLDATHQSAKGMLETFQRFQNDQLFISQRVDPYTLSHPMA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHH
RERIAALEQLAKASPYYEAKDPPALQARHDMMRAKLIGFMERPETVARRYPASDTSIAAQ
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
YARAISAYRFGNVNGSVAQIDALIARDPSNPYFYELKGQALLEAGRATESVAPLRKAVAM
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHH
TNGAPLIRSMLGQALVQAGNPSYTQEAIRELVQATQRDPNSASAWRSLSLAYGRSGDLAN
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
ADLAAAQSSFAEGEFKLGRELAARARQRFPQGSPGWLQADDLVNFKPPKSAANQQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PMPSSSPSFLSVGRALARGLCLAAAVVLPIQVALAQEQARKGPSTIRDTEIEALLKDYT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RPILKTAGLGQQNVEVVLISERSFNAFVADGKRIFVNTGALVDSTTPNQIIGVLAHETGH
HHHHHHCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCEECCCCHHHHHHHHHHCCCC
IAGGHLARMREQLAGAQTMAIVAMLLAAGGMAAGAAGGMNGRDLGNVGGAALSAPQELIR
CCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
RSLLNYQRGEEAAADRSAVKYLDATHQSAKGMLETFQRFQNDQLFISQRVDPYTLSHPMA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHH
RERIAALEQLAKASPYYEAKDPPALQARHDMMRAKLIGFMERPETVARRYPASDTSIAAQ
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHH
YARAISAYRFGNVNGSVAQIDALIARDPSNPYFYELKGQALLEAGRATESVAPLRKAVAM
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHH
TNGAPLIRSMLGQALVQAGNPSYTQEAIRELVQATQRDPNSASAWRSLSLAYGRSGDLAN
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
ADLAAAQSSFAEGEFKLGRELAARARQRFPQGSPGWLQADDLVNFKPPKSAANQQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]