| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247415
Identifier: 154247415
GI number: 154247415
Start: 3883515
End: 3884195
Strand: Direct
Name: 154247415
Synonym: Xaut_3487
Alternate gene names: NA
Gene position: 3883515-3884195 (Clockwise)
Preceding gene: 154247411
Following gene: 154247417
Centisome position: 73.15
GC content: 70.63
Gene sequence:
>681_bases ATGTCCACCCCAAGCCCCGCCACCCAACATCCCGCCACTCCCGCCGTGACGCTGGCCGTCTCCGCGCTCGATCTCGGGGC GCTCCTGTGCTCGCGGGTGTGCCATGACGTGATCAGCCCGGTGGGCGCCATCGTCAACGGCCTCGAGGTGCTGGAGGACG AGGACGCCGCCGACATGCGCGATGTTGCCCTCGATCTCATCGCCAAGAGCGCGCGGCAGGCTTCGGCCCGGCTCCAGTTC ACCCGCCTCGCCTTCGGTGCCGCCGGCTCCGCCGGGGCGCGGCTTGACCTCGGCGATGCCGAGCAGGTGGTGCGCCCGGT GATCGAGGACGGCCGCACGCGGGTGGAATGGTCCCTGCCACGGGAGCTTCTGCCCAAGAACCGGGTCAAGCTGCTGCTCA ACCTGGTGCTGCTCGCCGGCACCACCATTCCGCGCGGCGGGGTCATCCGCATCTCGGCGGTGGGGGAGGGGGATGCCACC GGCTTCGTGCTGGCTTCCACCGGCGAGAAGGCGCGCATTCCGGAAGGGCTTCAGGCGCTAGTCGACGGCGTGGCGCCCGA GGGTGGGCTTGATGCCCATTCGGTGCAGCCCTTCTATGCCGGCATGCTGGCCCGCGACTGCGCCATCGCCATCCGCTTCG CCCAGGACGGCGACACGGTAACCATCTCCACGCCGGGCTGA
Upstream 100 bases:
>100_bases TCGCCGGCAGTGTAACTGGACCCACATTGATCCAGACGGATTCGGGCGCGGTCCGGCGGAGCCGCATTGAGCCGCCCGCC GTCGCCTTCCGGGAGACGCC
Downstream 100 bases:
>100_bases CGAGGTCGCCCGCGAGAGGCTCTTTCGCGCGGGGCGCGTGACGTTTTCTCTCGCAGTCGGTGCTTACCTCGGCCCCAGAC GAAAAAAAGCCCCGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSTPSPATQHPATPAVTLAVSALDLGALLCSRVCHDVISPVGAIVNGLEVLEDEDAADMRDVALDLIAKSARQASARLQF TRLAFGAAGSAGARLDLGDAEQVVRPVIEDGRTRVEWSLPRELLPKNRVKLLLNLVLLAGTTIPRGGVIRISAVGEGDAT GFVLASTGEKARIPEGLQALVDGVAPEGGLDAHSVQPFYAGMLARDCAIAIRFAQDGDTVTISTPG
Sequences:
>Translated_226_residues MSTPSPATQHPATPAVTLAVSALDLGALLCSRVCHDVISPVGAIVNGLEVLEDEDAADMRDVALDLIAKSARQASARLQF TRLAFGAAGSAGARLDLGDAEQVVRPVIEDGRTRVEWSLPRELLPKNRVKLLLNLVLLAGTTIPRGGVIRISAVGEGDAT GFVLASTGEKARIPEGLQALVDGVAPEGGLDAHSVQPFYAGMLARDCAIAIRFAQDGDTVTISTPG >Mature_225_residues STPSPATQHPATPAVTLAVSALDLGALLCSRVCHDVISPVGAIVNGLEVLEDEDAADMRDVALDLIAKSARQASARLQFT RLAFGAAGSAGARLDLGDAEQVVRPVIEDGRTRVEWSLPRELLPKNRVKLLLNLVLLAGTTIPRGGVIRISAVGEGDATG FVLASTGEKARIPEGLQALVDGVAPEGGLDAHSVQPFYAGMLARDCAIAIRFAQDGDTVTISTPG
Specific function: Unknown
COG id: COG5385
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23422; Mature: 23291
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSPATQHPATPAVTLAVSALDLGALLCSRVCHDVISPVGAIVNGLEVLEDEDAADMR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH DVALDLIAKSARQASARLQFTRLAFGAAGSAGARLDLGDAEQVVRPVIEDGRTRVEWSLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCEEEECCC RELLPKNRVKLLLNLVLLAGTTIPRGGVIRISAVGEGDATGFVLASTGEKARIPEGLQAL HHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHH VDGVAPEGGLDAHSVQPFYAGMLARDCAIAIRFAQDGDTVTISTPG HHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCEEEEECCC >Mature Secondary Structure STPSPATQHPATPAVTLAVSALDLGALLCSRVCHDVISPVGAIVNGLEVLEDEDAADMR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH DVALDLIAKSARQASARLQFTRLAFGAAGSAGARLDLGDAEQVVRPVIEDGRTRVEWSLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCEEEECCC RELLPKNRVKLLLNLVLLAGTTIPRGGVIRISAVGEGDATGFVLASTGEKARIPEGLQAL HHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHH VDGVAPEGGLDAHSVQPFYAGMLARDCAIAIRFAQDGDTVTISTPG HHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA