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The map label for this gene is putR [H]

Identifier: 154247376

GI number: 154247376

Start: 3837423

End: 3837893

Strand: Reverse

Name: putR [H]

Synonym: Xaut_3448

Alternate gene names: 154247376

Gene position: 3837893-3837423 (Counterclockwise)

Preceding gene: 154247378

Following gene: 154247375

Centisome position: 72.29

GC content: 64.54

Gene sequence:

>471_bases
ATGGAAAATGACGCCTATGACAGCCAAATCGACTCCTTCGACGCCCGCATCATCGCCGCTCTGGTGGAGGACGGGCGCAT
GTCCGTGACCGACCTCGCGGCGCGGGTGGGCCTGTCGCGCAGCCCGTGCCAGGCGCGGCTGAAGCGGCTGATGGACGAGG
GCTATATCCGCGGCTTCCGCGCGGTGCTCGATCCGGTGAAGCTCAGGCTGGAGCACATCGCCTTCACCGAGGTGAAGCTC
TCCGAGACCACGGAGAAGGCGCTCTCGGCCTTCAACGCGGCGGTGCTGCGCATCAAGGAGGTGGAGGCCTGCCACATGAT
CGCGGGATCGTTCGATTATCTCTTGAAGGTGCGCACCCGCGACATCCGACGCTACCGCGAGGTGCTGGGGGAAAAGATCT
CCGCTTTGCCCCATGTGGCGAGCACCTCCACCTACGTGGTCATGGAACCGGTGAAGGACGACGGGGCATGA

Upstream 100 bases:

>100_bases
TGCTTACATCCTAATCCAGAGGTGGAAGACATTCCGGCTTTTCATACGCCGCATGACACATCATAGTTACTTTAAATGAT
CGTATCATGAGATCACTTTA

Downstream 100 bases:

>100_bases
GCTGCGGCAATCGTGCGCCTTGACCCTTCGTTGCCCTTTACAACCGGCCGAAGCGACCTCACTCTCTCCACAAAACATAA
GAGGCCCTACGCGGCCTTCA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MENDAYDSQIDSFDARIIAALVEDGRMSVTDLAARVGLSRSPCQARLKRLMDEGYIRGFRAVLDPVKLRLEHIAFTEVKL
SETTEKALSAFNAAVLRIKEVEACHMIAGSFDYLLKVRTRDIRRYREVLGEKISALPHVASTSTYVVMEPVKDDGA

Sequences:

>Translated_156_residues
MENDAYDSQIDSFDARIIAALVEDGRMSVTDLAARVGLSRSPCQARLKRLMDEGYIRGFRAVLDPVKLRLEHIAFTEVKL
SETTEKALSAFNAAVLRIKEVEACHMIAGSFDYLLKVRTRDIRRYREVLGEKISALPHVASTSTYVVMEPVKDDGA
>Mature_156_residues
MENDAYDSQIDSFDARIIAALVEDGRMSVTDLAARVGLSRSPCQARLKRLMDEGYIRGFRAVLDPVKLRLEHIAFTEVKL
SETTEKALSAFNAAVLRIKEVEACHMIAGSFDYLLKVRTRDIRRYREVLGEKISALPHVASTSTYVVMEPVKDDGA

Specific function: Transcriptional activator of the putA gene in response to proline [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=43.3566433566434, Blast_Score=132, Evalue=8e-33,
Organism=Escherichia coli, GI87081742, Length=143, Percent_Identity=32.8671328671329, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENDAYDSQIDSFDARIIAALVEDGRMSVTDLAARVGLSRSPCQARLKRLMDEGYIRGFR
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVLDPVKLRLEHIAFTEVKLSETTEKALSAFNAAVLRIKEVEACHMIAGSFDYLLKVRTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DIRRYREVLGEKISALPHVASTSTYVVMEPVKDDGA
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MENDAYDSQIDSFDARIIAALVEDGRMSVTDLAARVGLSRSPCQARLKRLMDEGYIRGFR
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVLDPVKLRLEHIAFTEVKLSETTEKALSAFNAAVLRIKEVEACHMIAGSFDYLLKVRTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DIRRYREVLGEKISALPHVASTSTYVVMEPVKDDGA
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8606160 [H]