Click here to switch to the map view.

The map label for this gene is hbpA [H]

Identifier: 154247309

GI number: 154247309

Start: 3767802

End: 3769484

Strand: Reverse

Name: hbpA [H]

Synonym: Xaut_3381

Alternate gene names: 154247309

Gene position: 3769484-3767802 (Counterclockwise)

Preceding gene: 154247311

Following gene: 154247308

Centisome position: 71.0

GC content: 65.95

Gene sequence:

>1683_bases
ATGATGCTGCAAACTGAAAAGCGGATCCGCTCCGGTCGCCACACGATGAAGACCGCCGCCCTTCTGCTGGCCACGACCTT
TGCCTGCATCGCTCCCGGCATCGCCGGTGCCGAGACCACCCTGCGCATCGGCATGACCGCCGCCGACATTCCGCGCACCC
TCGGCCAGCCCGACCAGGGCTTCGAGGGCAACCGCTTCACCGGCGTCACCATGTATGACGCGCTGGTGAACTGGGACCTG
TCCTCCGCCACAAAGCCCAGCGTGCTCATCCCCGGCCTTGCCACCGAATGGAAGGTGGACGACGCCGACAAGACCAAGTG
GGTGTTCAAGCTGCGCCCCGGCGTCACCTTCCACGATGGCTCGCCGTTCAACGCGGACGCCGTGGTCTGGAACGTGGGCA
AGGTGCTGAACAAGGAGGCCCCGCAATTCGACGCCAGCCAGGTGGGCGTCACCGCCTCGCGCATGCCGACCCTGGTCTCG
GCGAAGAAGATCGACGACCTGACGGTGGAGCTGACCACCAAGGAGCCGGATAGCTTCCTGCCCTACAACCTCACCAACCT
GTTCATGGCGAGCCCCGCCCAGTGGCAGAAATTCTATGACGCCGCCGACGGCGCCGACGCGAAAGCCAAGGCGGCAGCCG
CCTGGACCGCCTTCGCCAGGAACGCGTCGGGGACCGGCCCGTGGAAGATGACCAATTTCGTGCCCCGCGAGCGGCTGGAG
CTGGTGAAGAACGAGGCTTATTGGGACAAGGCGCGGGTGCCCAAGACCGACAAGATGGTCCTGTTGCCCATGCCCGAGGC
CAACGCCCGCACCGCCGCGCTCATGGCCGGCCAGGTGGACTGGATCGAGGCTCCCGCCCCCGACGCGATCGCCCAGCTGA
AATCCCGCGGCTTCAAGATCGAGAGCAACGAGCAGCCCCACGTGTGGCCGTGGCAGTTCTCCCGCGTCGAAGGCTCGCCG
TGGAACGACATCCGCGTGCGCAAGGCGGCAAACCTGTGCATCGACCGGGAAGGCATGAAGGACGGCCTGCTCGGCGGCCT
CATGGTGCCGGCCACCGGAACCGTGGAGCCCGGCCACCCCTGGCGCGGCAACCCCACCTTCCAGATCAAGTATGACGTGG
CCGCCGGCCAGAAGCTGATGAAGGAGGCCGGCTACGGCCCCGACAAGAAGCTGACGGTGAAGACCCAGACCTCCGCCTCC
GGCTCCGGCCAGATGCTGCCCCTGCCCATGAACGAATATCTCCAGCAGGCGCTGGCGGACTGCTATTTCGACGTTCAGCT
CGACGTGATCGAGTGGAACACCCTGTTCACCAACTGGCGCAAGGGCGCCAAGGACCCGACCGCAAACGGCGCCAACGCCA
TCAACGTGACCTATGCAGCCATGGACCCGTTCTTCGCCATGGTGCGCTTCCTGCAGTCGGGCATGGCGCCGCCGGTGTCC
AACAACTGGGGCTTCAACAACAATCCCAAGTTCGACGAGCTGGTGAAGAAGGCTCGGACCTCGTTCGATCCCGCTGCGCG
GGACGCGGCGCTCGCCGAGCTGCATGCCGCCTCGGTGGACGACGCGGCCTTCCTCTATGTGGCGCACGACGTGGGACCCC
GCGCCATGAGCCCCAAGATCAAGGGCTTCGTGCAGCCCAAGAGCTGGTTCGTGGACTTCTCGCCGGTGTCGATCTCGCAG
TGA

Upstream 100 bases:

>100_bases
GCAGCGGGAGCTTTGTTCTCTTCGATTTGCGGGGTGTGGCACGGCGGTTGCTAACGTTCTGGGCATCTCGTGAATTGGGC
ATCCCGCCGCAAAGGACTCC

Downstream 100 bases:

>100_bases
TGCCTTGAACCGGAACGCGGGGTGCTGAACGCGCCCCGCGTGTTCTTCCCCCTGCGCAAGGTGGCCCCGTGCTGGTCTAT
ATCCTGAGGCGGATCATCTA

Product: 4-phytase

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: Hemin-binding lipoprotein [H]

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MMLQTEKRIRSGRHTMKTAALLLATTFACIAPGIAGAETTLRIGMTAADIPRTLGQPDQGFEGNRFTGVTMYDALVNWDL
SSATKPSVLIPGLATEWKVDDADKTKWVFKLRPGVTFHDGSPFNADAVVWNVGKVLNKEAPQFDASQVGVTASRMPTLVS
AKKIDDLTVELTTKEPDSFLPYNLTNLFMASPAQWQKFYDAADGADAKAKAAAAWTAFARNASGTGPWKMTNFVPRERLE
LVKNEAYWDKARVPKTDKMVLLPMPEANARTAALMAGQVDWIEAPAPDAIAQLKSRGFKIESNEQPHVWPWQFSRVEGSP
WNDIRVRKAANLCIDREGMKDGLLGGLMVPATGTVEPGHPWRGNPTFQIKYDVAAGQKLMKEAGYGPDKKLTVKTQTSAS
GSGQMLPLPMNEYLQQALADCYFDVQLDVIEWNTLFTNWRKGAKDPTANGANAINVTYAAMDPFFAMVRFLQSGMAPPVS
NNWGFNNNPKFDELVKKARTSFDPAARDAALAELHAASVDDAAFLYVAHDVGPRAMSPKIKGFVQPKSWFVDFSPVSISQ

Sequences:

>Translated_560_residues
MMLQTEKRIRSGRHTMKTAALLLATTFACIAPGIAGAETTLRIGMTAADIPRTLGQPDQGFEGNRFTGVTMYDALVNWDL
SSATKPSVLIPGLATEWKVDDADKTKWVFKLRPGVTFHDGSPFNADAVVWNVGKVLNKEAPQFDASQVGVTASRMPTLVS
AKKIDDLTVELTTKEPDSFLPYNLTNLFMASPAQWQKFYDAADGADAKAKAAAAWTAFARNASGTGPWKMTNFVPRERLE
LVKNEAYWDKARVPKTDKMVLLPMPEANARTAALMAGQVDWIEAPAPDAIAQLKSRGFKIESNEQPHVWPWQFSRVEGSP
WNDIRVRKAANLCIDREGMKDGLLGGLMVPATGTVEPGHPWRGNPTFQIKYDVAAGQKLMKEAGYGPDKKLTVKTQTSAS
GSGQMLPLPMNEYLQQALADCYFDVQLDVIEWNTLFTNWRKGAKDPTANGANAINVTYAAMDPFFAMVRFLQSGMAPPVS
NNWGFNNNPKFDELVKKARTSFDPAARDAALAELHAASVDDAAFLYVAHDVGPRAMSPKIKGFVQPKSWFVDFSPVSISQ
>Mature_560_residues
MMLQTEKRIRSGRHTMKTAALLLATTFACIAPGIAGAETTLRIGMTAADIPRTLGQPDQGFEGNRFTGVTMYDALVNWDL
SSATKPSVLIPGLATEWKVDDADKTKWVFKLRPGVTFHDGSPFNADAVVWNVGKVLNKEAPQFDASQVGVTASRMPTLVS
AKKIDDLTVELTTKEPDSFLPYNLTNLFMASPAQWQKFYDAADGADAKAKAAAAWTAFARNASGTGPWKMTNFVPRERLE
LVKNEAYWDKARVPKTDKMVLLPMPEANARTAALMAGQVDWIEAPAPDAIAQLKSRGFKIESNEQPHVWPWQFSRVEGSP
WNDIRVRKAANLCIDREGMKDGLLGGLMVPATGTVEPGHPWRGNPTFQIKYDVAAGQKLMKEAGYGPDKKLTVKTQTSAS
GSGQMLPLPMNEYLQQALADCYFDVQLDVIEWNTLFTNWRKGAKDPTANGANAINVTYAAMDPFFAMVRFLQSGMAPPVS
NNWGFNNNPKFDELVKKARTSFDPAARDAALAELHAASVDDAAFLYVAHDVGPRAMSPKIKGFVQPKSWFVDFSPVSISQ

Specific function: Important role in heme acquisition or metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=526, Percent_Identity=26.615969581749, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI87081878, Length=496, Percent_Identity=24.5967741935484, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1787495, Length=553, Percent_Identity=23.869801084991, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787052, Length=477, Percent_Identity=24.9475890985325, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787762, Length=558, Percent_Identity=24.5519713261649, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789887, Length=485, Percent_Identity=22.4742268041237, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787551, Length=505, Percent_Identity=22.970297029703, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789397, Length=468, Percent_Identity=22.4358974358974, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61431; Mature: 61431

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLQTEKRIRSGRHTMKTAALLLATTFACIAPGIAGAETTLRIGMTAADIPRTLGQPDQG
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCCCC
FEGNRFTGVTMYDALVNWDLSSATKPSVLIPGLATEWKVDDADKTKWVFKLRPGVTFHDG
CCCCEEEEEEHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEECCC
SPFNADAVVWNVGKVLNKEAPQFDASQVGVTASRMPTLVSAKKIDDLTVELTTKEPDSFL
CCCCCCEEEEEHHHHHCCCCCCCCCHHCCCCHHHCCHHHHHHCCCCEEEEEECCCCCCCC
PYNLTNLFMASPAQWQKFYDAADGADAKAKAAAAWTAFARNASGTGPWKMTNFVPRERLE
CCCHHHHEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
LVKNEAYWDKARVPKTDKMVLLPMPEANARTAALMAGQVDWIEAPAPDAIAQLKSRGFKI
HHHCCCHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCEECCCCCHHHHHHHHCCEEE
ESNEQPHVWPWQFSRVEGSPWNDIRVRKAANLCIDREGMKDGLLGGLMVPATGTVEPGHP
CCCCCCCCCCCEEECCCCCCCCCEEHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCC
WRGNPTFQIKYDVAAGQKLMKEAGYGPDKKLTVKTQTSASGSGQMLPLPMNEYLQQALAD
CCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHH
CYFDVQLDVIEWNTLFTNWRKGAKDPTANGANAINVTYAAMDPFFAMVRFLQSGMAPPVS
EEEEEEEEEEECHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCC
NNWGFNNNPKFDELVKKARTSFDPAARDAALAELHAASVDDAAFLYVAHDVGPRAMSPKI
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
KGFVQPKSWFVDFSPVSISQ
CEEECCCCEEEEECCCCCCC
>Mature Secondary Structure
MMLQTEKRIRSGRHTMKTAALLLATTFACIAPGIAGAETTLRIGMTAADIPRTLGQPDQG
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCCCC
FEGNRFTGVTMYDALVNWDLSSATKPSVLIPGLATEWKVDDADKTKWVFKLRPGVTFHDG
CCCCEEEEEEHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCEEECCC
SPFNADAVVWNVGKVLNKEAPQFDASQVGVTASRMPTLVSAKKIDDLTVELTTKEPDSFL
CCCCCCEEEEEHHHHHCCCCCCCCCHHCCCCHHHCCHHHHHHCCCCEEEEEECCCCCCCC
PYNLTNLFMASPAQWQKFYDAADGADAKAKAAAAWTAFARNASGTGPWKMTNFVPRERLE
CCCHHHHEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
LVKNEAYWDKARVPKTDKMVLLPMPEANARTAALMAGQVDWIEAPAPDAIAQLKSRGFKI
HHHCCCHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCCEECCCCCHHHHHHHHCCEEE
ESNEQPHVWPWQFSRVEGSPWNDIRVRKAANLCIDREGMKDGLLGGLMVPATGTVEPGHP
CCCCCCCCCCCEEECCCCCCCCCEEHHHHHHHEECCCCCCCCCCCCEEECCCCCCCCCCC
WRGNPTFQIKYDVAAGQKLMKEAGYGPDKKLTVKTQTSASGSGQMLPLPMNEYLQQALAD
CCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHH
CYFDVQLDVIEWNTLFTNWRKGAKDPTANGANAINVTYAAMDPFFAMVRFLQSGMAPPVS
EEEEEEEEEEECHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCC
NNWGFNNNPKFDELVKKARTSFDPAARDAALAELHAASVDDAAFLYVAHDVGPRAMSPKI
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
KGFVQPKSWFVDFSPVSISQ
CEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1339409; 7542800; 2041470 [H]