| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is gsiD [H]
Identifier: 154247307
GI number: 154247307
Start: 3765897
End: 3766784
Strand: Reverse
Name: gsiD [H]
Synonym: Xaut_3379
Alternate gene names: 154247307
Gene position: 3766784-3765897 (Counterclockwise)
Preceding gene: 154247308
Following gene: 154247306
Centisome position: 70.95
GC content: 68.02
Gene sequence:
>888_bases ATGAGCGCCACATCCGACGCCGCCCTCCAGGCCGCCCCGGTGCAGAAGGCCCGCGGCTATTGGGCCACCGTGGGCCGCCG CTTTTCCCGCGACAAGGTGAGCATGGTGTGCGCGGCGGTGCTGCTCGCCATCGTGCTCGCCGCCATCTTCGCCCCCTGGC TCGGCCTTGCCGATCCCTACCAGGGCTCCATGGTCCGCCGCCTCCGCCACATCGGCACGCCGGGCTATCTGCTCGGCACC GACGAGCTGGGCCGCGACATGCTCTCCCGTCTCATCTATGGCGGGCGCCTCTCGCTGCTCATCGGCATCCTGCCGGTGGT GCTCGCCTTCGGCATCGGCACCAGCCTCGGCCTGCTCGCCGGCTATCTGGGCGGGGCGGTGAACACCATCATCATGCGCA CCATCGACGTGTTCTACGCCTTCCCCTCGGTGCTGCTGGCCATCGCCATCTCCGGGGTGCTGGGGGCGGGCATTGTCAAT TCCATCGTCTCGCTCACCATCGTGTTCGTGCCGCAGATCACCCGCGTGGCGGAGAGCGTGACCACCTCGGTGCGCAACCT CGACTTCGTGGATGCGGCGCGGGCCTCCGGGGCCGGGGCCATCACCATCATGCGGGTGCACATGCTGGGCAACGTGCTCG GTCCGATCTTCGTCTATGCGACGGGGCTGATCTCGGTATCCATGATCCTGGCCTCGGGCCTGTCCTTCCTCGGCCTCGGC ACCAAGCCGCCGGAGCCGGAATGGGGCCTGATGCTGAACACCCTGCGCACCGCCATCTACGTCAACCCGGGCGTGGCCGC CCTGCCGGGGGTGATGATCTTCGCCGTCTCCATCTGCTTCAACATGCTCAGCGACGGGCTGCGCAGCGCCATGGACATCC GCAATTGA
Upstream 100 bases:
>100_bases GGCACCATCCTGGTGCTGGCGCTGTTCTTCGTCTTCCTCAACCTCGTGGTCGATATCGCCCAGGCGTCCATCGATCCGCG CATCAAGCGGAGCTGAGGAC
Downstream 100 bases:
>100_bases CCCTCATCGAGCCCCTCCCCGAGCCGATCCTGGAGCCCCTGGCGGACATCGGCGGGCCGGCCCAGCCGCTGCTCGACGTG AAGAACCTCACCAAGCACTT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSATSDAALQAAPVQKARGYWATVGRRFSRDKVSMVCAAVLLAIVLAAIFAPWLGLADPYQGSMVRRLRHIGTPGYLLGT DELGRDMLSRLIYGGRLSLLIGILPVVLAFGIGTSLGLLAGYLGGAVNTIIMRTIDVFYAFPSVLLAIAISGVLGAGIVN SIVSLTIVFVPQITRVAESVTTSVRNLDFVDAARASGAGAITIMRVHMLGNVLGPIFVYATGLISVSMILASGLSFLGLG TKPPEPEWGLMLNTLRTAIYVNPGVAALPGVMIFAVSICFNMLSDGLRSAMDIRN
Sequences:
>Translated_295_residues MSATSDAALQAAPVQKARGYWATVGRRFSRDKVSMVCAAVLLAIVLAAIFAPWLGLADPYQGSMVRRLRHIGTPGYLLGT DELGRDMLSRLIYGGRLSLLIGILPVVLAFGIGTSLGLLAGYLGGAVNTIIMRTIDVFYAFPSVLLAIAISGVLGAGIVN SIVSLTIVFVPQITRVAESVTTSVRNLDFVDAARASGAGAITIMRVHMLGNVLGPIFVYATGLISVSMILASGLSFLGLG TKPPEPEWGLMLNTLRTAIYVNPGVAALPGVMIFAVSICFNMLSDGLRSAMDIRN >Mature_294_residues SATSDAALQAAPVQKARGYWATVGRRFSRDKVSMVCAAVLLAIVLAAIFAPWLGLADPYQGSMVRRLRHIGTPGYLLGTD ELGRDMLSRLIYGGRLSLLIGILPVVLAFGIGTSLGLLAGYLGGAVNTIIMRTIDVFYAFPSVLLAIAISGVLGAGIVNS IVSLTIVFVPQITRVAESVTTSVRNLDFVDAARASGAGAITIMRVHMLGNVLGPIFVYATGLISVSMILASGLSFLGLGT KPPEPEWGLMLNTLRTAIYVNPGVAALPGVMIFAVSICFNMLSDGLRSAMDIRN
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=290, Percent_Identity=39.6551724137931, Blast_Score=207, Evalue=4e-55, Organism=Escherichia coli, GI1787760, Length=282, Percent_Identity=32.6241134751773, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI1789964, Length=301, Percent_Identity=37.2093023255814, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1789889, Length=217, Percent_Identity=37.3271889400922, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=32.6241134751773, Blast_Score=134, Evalue=8e-33, Organism=Escherichia coli, GI1787549, Length=284, Percent_Identity=30.6338028169014, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=29.0909090909091, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31000; Mature: 30869
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATSDAALQAAPVQKARGYWATVGRRFSRDKVSMVCAAVLLAIVLAAIFAPWLGLADPY CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QGSMVRRLRHIGTPGYLLGTDELGRDMLSRLIYGGRLSLLIGILPVVLAFGIGTSLGLLA CHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH GYLGGAVNTIIMRTIDVFYAFPSVLLAIAISGVLGAGIVNSIVSLTIVFVPQITRVAESV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTSVRNLDFVDAARASGAGAITIMRVHMLGNVLGPIFVYATGLISVSMILASGLSFLGLG HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TKPPEPEWGLMLNTLRTAIYVNPGVAALPGVMIFAVSICFNMLSDGLRSAMDIRN CCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SATSDAALQAAPVQKARGYWATVGRRFSRDKVSMVCAAVLLAIVLAAIFAPWLGLADPY CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QGSMVRRLRHIGTPGYLLGTDELGRDMLSRLIYGGRLSLLIGILPVVLAFGIGTSLGLLA CHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHH GYLGGAVNTIIMRTIDVFYAFPSVLLAIAISGVLGAGIVNSIVSLTIVFVPQITRVAESV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTSVRNLDFVDAARASGAGAITIMRVHMLGNVLGPIFVYATGLISVSMILASGLSFLGLG HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TKPPEPEWGLMLNTLRTAIYVNPGVAALPGVMIFAVSICFNMLSDGLRSAMDIRN CCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]