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The map label for this gene is yiiZ [H]

Identifier: 154247296

GI number: 154247296

Start: 3754644

End: 3755618

Strand: Reverse

Name: yiiZ [H]

Synonym: Xaut_3368

Alternate gene names: 154247296

Gene position: 3755618-3754644 (Counterclockwise)

Preceding gene: 154247297

Following gene: 154247295

Centisome position: 70.74

GC content: 63.59

Gene sequence:

>975_bases
ATGAAGGGATTGGCGCTCTATGTCGCCGCGGCGATGACTTCGGTGATCGCCCTTACGCCGCTCGCGGCACAGGCACGGCA
GTACCGCTCCGCCGACGTGCAGCCCGCGGACTATCCGACGGTCAAGGCCGTCCAGTCCATGAGCGATGAGCTGAACAAGG
AGACCAATGGCAAGATCTCCATCAAGGTCTTCCCGAACTCGCAGCTCGGCAGCGAGAAGGACACCATCGAGCAGGTGAAG
CTCGGCGCTCTGGACTTCATCCGCATCAATTCCGGCACGCTGAACACCGTGTGCCCGGCCATGACCGTGCCGGTCCTGCC
CTTCCTGTTCCGTGACAAGGCGCACATGCGCGCCGTGCTCGACGGGCCCATCGGCGACGAGATCCTCGCCGATTGCGCCT
CCCACGGCCTCGTAGGCCTCGCCTTCTACGATTCCGGCGCCCGCTCCTTCTATGCCACCACGCCCATCCGCAAGCTGGAG
GACCTGAAGGGCAAGAAGATCCGCGTGCAGCAGTCCGACATCTGGGTGTCCATGATGAAGCTGCTCGGCGCCAACGCCAC
GCCCATGCCCGCCGGCGAGGTCTTCACCGGCCTCAAGAGCGGCCTCATCGACGGCGCGGAAAACAACTGGCCGAGCTACG
ACAATTTCCACCATTACGAGGCGGCCAAGAACTACAGCCTGAGCGAGCACTCCATGGCGCCGGAAGTGCTGCTGATCTCC
AAGCGCGTGTTTGACAGCTTCACGCCCGAGGAGCAGGTCCAGGTGCGCAAGGCGGCCAAGAACTCGGTCGGCTACATGCG
CCAGCTCTGGGACGCCATGGAAATCTCCTCCCGCGAGAAGGTGGAGAAGGCCGGCGTCGAGGTCATCACCATCGACAAGG
CGCCGTTCCAGGCCGCGGTGCAGCCGCTCTACGACCAGTTCGTCACCGATCCCAAGCTCAAGGACATGATCACGCGCATC
AAGGCGGCCCAATAA

Upstream 100 bases:

>100_bases
AGGCATTGCCCGCAGAAACACCCACCGGGGCGCGCATCTAGCCCCGGCGACCCAAGCTCAAAGACACCGAGATCCAGCAA
ATACGGACAGGGAGGAAGAC

Downstream 100 bases:

>100_bases
GCCGCCGCTGCCTCGGCACATCCTGCCGGACCCGGAGGGCTGCACCGCGCCAGAAGCGGTGCAGCCGAAGGCGGCCGGGC
ACGAGGCACCGCGAGGACCC

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKGLALYVAAAMTSVIALTPLAAQARQYRSADVQPADYPTVKAVQSMSDELNKETNGKISIKVFPNSQLGSEKDTIEQVK
LGALDFIRINSGTLNTVCPAMTVPVLPFLFRDKAHMRAVLDGPIGDEILADCASHGLVGLAFYDSGARSFYATTPIRKLE
DLKGKKIRVQQSDIWVSMMKLLGANATPMPAGEVFTGLKSGLIDGAENNWPSYDNFHHYEAAKNYSLSEHSMAPEVLLIS
KRVFDSFTPEEQVQVRKAAKNSVGYMRQLWDAMEISSREKVEKAGVEVITIDKAPFQAAVQPLYDQFVTDPKLKDMITRI
KAAQ

Sequences:

>Translated_324_residues
MKGLALYVAAAMTSVIALTPLAAQARQYRSADVQPADYPTVKAVQSMSDELNKETNGKISIKVFPNSQLGSEKDTIEQVK
LGALDFIRINSGTLNTVCPAMTVPVLPFLFRDKAHMRAVLDGPIGDEILADCASHGLVGLAFYDSGARSFYATTPIRKLE
DLKGKKIRVQQSDIWVSMMKLLGANATPMPAGEVFTGLKSGLIDGAENNWPSYDNFHHYEAAKNYSLSEHSMAPEVLLIS
KRVFDSFTPEEQVQVRKAAKNSVGYMRQLWDAMEISSREKVEKAGVEVITIDKAPFQAAVQPLYDQFVTDPKLKDMITRI
KAAQ
>Mature_324_residues
MKGLALYVAAAMTSVIALTPLAAQARQYRSADVQPADYPTVKAVQSMSDELNKETNGKISIKVFPNSQLGSEKDTIEQVK
LGALDFIRINSGTLNTVCPAMTVPVLPFLFRDKAHMRAVLDGPIGDEILADCASHGLVGLAFYDSGARSFYATTPIRKLE
DLKGKKIRVQQSDIWVSMMKLLGANATPMPAGEVFTGLKSGLIDGAENNWPSYDNFHHYEAAKNYSLSEHSMAPEVLLIS
KRVFDSFTPEEQVQVRKAAKNSVGYMRQLWDAMEISSREKVEKAGVEVITIDKAPFQAAVQPLYDQFVTDPKLKDMITRI
KAAQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=324, Percent_Identity=32.0987654320988, Blast_Score=161, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35649; Mature: 35649

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLALYVAAAMTSVIALTPLAAQARQYRSADVQPADYPTVKAVQSMSDELNKETNGKIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
IKVFPNSQLGSEKDTIEQVKLGALDFIRINSGTLNTVCPAMTVPVLPFLFRDKAHMRAVL
EEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DGPIGDEILADCASHGLVGLAFYDSGARSFYATTPIRKLEDLKGKKIRVQQSDIWVSMMK
CCCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCHHHHHHCCCCEEEEEHHHHHHHHHH
LLGANATPMPAGEVFTGLKSGLIDGAENNWPSYDNFHHYEAAKNYSLSEHSMAPEVLLIS
HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCHHHHHH
KRVFDSFTPEEQVQVRKAAKNSVGYMRQLWDAMEISSREKVEKAGVEVITIDKAPFQAAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
QPLYDQFVTDPKLKDMITRIKAAQ
HHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKGLALYVAAAMTSVIALTPLAAQARQYRSADVQPADYPTVKAVQSMSDELNKETNGKIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
IKVFPNSQLGSEKDTIEQVKLGALDFIRINSGTLNTVCPAMTVPVLPFLFRDKAHMRAVL
EEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DGPIGDEILADCASHGLVGLAFYDSGARSFYATTPIRKLEDLKGKKIRVQQSDIWVSMMK
CCCCCHHHHHHHHHCCCEEEEEECCCCCCEEECCCHHHHHHCCCCEEEEEHHHHHHHHHH
LLGANATPMPAGEVFTGLKSGLIDGAENNWPSYDNFHHYEAAKNYSLSEHSMAPEVLLIS
HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCHHHHHH
KRVFDSFTPEEQVQVRKAAKNSVGYMRQLWDAMEISSREKVEKAGVEVITIDKAPFQAAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH
QPLYDQFVTDPKLKDMITRIKAAQ
HHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]