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The map label for this gene is yhfI [H]

Identifier: 154247253

GI number: 154247253

Start: 3698046

End: 3698789

Strand: Direct

Name: yhfI [H]

Synonym: Xaut_3325

Alternate gene names: 154247253

Gene position: 3698046-3698789 (Clockwise)

Preceding gene: 154247252

Following gene: 154247254

Centisome position: 69.66

GC content: 67.88

Gene sequence:

>744_bases
ATGAAGCTGAAGGTGGTCGGCTGCGGCGACGCGTTCGGCTCCGGCGGGCGCGGCAACAGCTGCTTCCTGGTGGCCTCACA
GGCGGTCAAGGCCACCCTCGACTTCGGTGCCAGCGCCCTCGTGAACTTCAACAGGTTCAACATGGGTTCGGCGGACATCG
ACACGGTGTTCATCAGCCACCTTCATGGAGATCACTTCGGTGGTATCCCATTCCTCCTGCTGGATGGCCAGTTCGTCCAT
CTGCGGGAACGGCCGCTGTCCATCGTCGGCCCGCCCGGAACCCGGGCGCGGCTGACGGCGGCCATGGAGGTGCTGTTCCC
CGGCATGGGGGAGATCGACTGGCGATTCGCCTGGAGCGTGACCGAGGTCGAGCCCGGCTCCACTACCCGTCATGGCCCCC
TGACCCTGACCACAGCGGAGGTGGTCCATCCCTCTGGAGCGCCCTCCACCGCCCTGCGGCTGGAGGACGGCACCCACACC
CTCGCCTTCTCCGGCGATACCCAGTGGACCGACGCGCTGCTGCCCATTGCCCGGGGGGCGGACCTCTTCATCTGCGAGAG
CTTCGCCTTCGAGGGCGAGCCCTACGGCCATCTCGCCTACCGCACCATTGCCCACCGGCGCGCGGACCTCGGCGCCCGGC
GCATCCTGCTCACCCACATGAGCGACGCCATGTGGGCGCGCCGGGGGGAGGTGGACCCCACCCATTTCATCGTGGCCGAG
GATGGGCTCGAACTCGACATCTGA

Upstream 100 bases:

>100_bases
TTCATGCGGGTGATCCGCGTGGCACTCGCGCCCACCCATGAAAACCTTGCCCGCTGGCATGCGGCCGTCTCGGCCCGGCC
GAGCGCAAAGGCTTGAAATC

Downstream 100 bases:

>100_bases
TCCCGCCCTCGACGCTTTGGTGGCGCGCATCCGCGCCTGCCGGGTGTGCGTGGAGGCGCCGCGCGGCGCCCCGCTGCCTC
ACGAACCCCGCCCGGTGCTG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKLKVVGCGDAFGSGGRGNSCFLVASQAVKATLDFGASALVNFNRFNMGSADIDTVFISHLHGDHFGGIPFLLLDGQFVH
LRERPLSIVGPPGTRARLTAAMEVLFPGMGEIDWRFAWSVTEVEPGSTTRHGPLTLTTAEVVHPSGAPSTALRLEDGTHT
LAFSGDTQWTDALLPIARGADLFICESFAFEGEPYGHLAYRTIAHRRADLGARRILLTHMSDAMWARRGEVDPTHFIVAE
DGLELDI

Sequences:

>Translated_247_residues
MKLKVVGCGDAFGSGGRGNSCFLVASQAVKATLDFGASALVNFNRFNMGSADIDTVFISHLHGDHFGGIPFLLLDGQFVH
LRERPLSIVGPPGTRARLTAAMEVLFPGMGEIDWRFAWSVTEVEPGSTTRHGPLTLTTAEVVHPSGAPSTALRLEDGTHT
LAFSGDTQWTDALLPIARGADLFICESFAFEGEPYGHLAYRTIAHRRADLGARRILLTHMSDAMWARRGEVDPTHFIVAE
DGLELDI
>Mature_247_residues
MKLKVVGCGDAFGSGGRGNSCFLVASQAVKATLDFGASALVNFNRFNMGSADIDTVFISHLHGDHFGGIPFLLLDGQFVH
LRERPLSIVGPPGTRARLTAAMEVLFPGMGEIDWRFAWSVTEVEPGSTTRHGPLTLTTAEVVHPSGAPSTALRLEDGTHT
LAFSGDTQWTDALLPIARGADLFICESFAFEGEPYGHLAYRTIAHRRADLGARRILLTHMSDAMWARRGEVDPTHFIVAE
DGLELDI

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 26717; Mature: 26717

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKVVGCGDAFGSGGRGNSCFLVASQAVKATLDFGASALVNFNRFNMGSADIDTVFISH
CEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHHEEEEH
LHGDHFGGIPFLLLDGQFVHLRERPLSIVGPPGTRARLTAAMEVLFPGMGEIDWRFAWSV
HCCCCCCCCCEEEECCEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
TEVEPGSTTRHGPLTLTTAEVVHPSGAPSTALRLEDGTHTLAFSGDTQWTDALLPIARGA
EEECCCCCCCCCCEEEEEEHEECCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCC
DLFICESFAFEGEPYGHLAYRTIAHRRADLGARRILLTHMSDAMWARRGEVDPTHFIVAE
CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHEEEEEHHHHHHHHHCCCCCCEEEEEEC
DGLELDI
CCCEECC
>Mature Secondary Structure
MKLKVVGCGDAFGSGGRGNSCFLVASQAVKATLDFGASALVNFNRFNMGSADIDTVFISH
CEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCCCEEEEEECCCCCCCCCHHHEEEEH
LHGDHFGGIPFLLLDGQFVHLRERPLSIVGPPGTRARLTAAMEVLFPGMGEIDWRFAWSV
HCCCCCCCCCEEEECCEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
TEVEPGSTTRHGPLTLTTAEVVHPSGAPSTALRLEDGTHTLAFSGDTQWTDALLPIARGA
EEECCCCCCCCCCEEEEEEHEECCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHCCC
DLFICESFAFEGEPYGHLAYRTIAHRRADLGARRILLTHMSDAMWARRGEVDPTHFIVAE
CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHEEEEEHHHHHHHHHCCCCCCEEEEEEC
DGLELDI
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]