| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247245
Identifier: 154247245
GI number: 154247245
Start: 3689247
End: 3690668
Strand: Direct
Name: 154247245
Synonym: Xaut_3317
Alternate gene names: NA
Gene position: 3689247-3690668 (Clockwise)
Preceding gene: 154247244
Following gene: 154247248
Centisome position: 69.49
GC content: 65.33
Gene sequence:
>1422_bases ATGCGCACCTTGAGTTCGTTTACCCTTGTGCTGCTCGCTGGCGTTGCCCTCGCCACGCCCGTCTTCGCCCAGGACAAGGC TGGATCTGACAAGGCGGCTTCCGCCCCCTCGGAAGGATCGGCCTATCCGGCGATCCTGGTGGGACAGGCGGTGCTGCCGG CCGCCAGCTTCGTGGCCGCGCCGGCGGACGCGCCGGCCGATCTGAAGACCTCCGGCAAGTTCACCAACGCCGACCGCAAG CGCATCGACCAGGTGGGCAGCGTGAAGGGCGTCAGCGTCCTCTCCGACAAGGCCGCCCCGCGCGAGACCGGCCTGTCCCT GCCCTTCGAGGGCCAGCCGGTGCAGGGCTTCTCCGGCATCGTCTCGGAAGGTGACGGCCGGTTCTGGGTGCTCACCGACA ACGGCTTCGGCTCCAAGGCCAATTCGCCCGACGCCATGCTGATGGCCCATCGCCTGAAGATGGATTTCAAGGACGGCAAG ATCGAGCGCCTCGCCACCCTCTTCCTGCACGATCCGGATAAGAAGGTGCCCTATCCCATCGTCATGGAGGGCACCGAGAA GCGCTATCTCACCGGCGCCGACTTCGACCTCGAATCGATCCAGGTGGTGGGCGACAGCATCTGGTTCGGCGAGGAGTTTG GACCCTTCCTGATCGAGACCGACCTCACCGGCAAGGTGAAAGCCGTGTTCGAGACCAAGGTGGACGGCAAGCCGGCGCGC TCGCCCGATCATCCGGCGGTCAGCACCCCTTCGGCGCCGGACGCCAAGGCGGCGTTCAACGTCTATCGCTCCAAGGGCTT CGAGGGCATGGCCCTGTCCCCTGATAAGACCAAGCTGTACGCGCTGCTGGAAGGCCCGTTGTTCGATGCGGCCGCCGGCG GCAAGGAGAAGGTGGGCGACAGCGAGGTGCTGCGCATCGTCGAGTTCGACATCGCCAAGCGCGACTGGACCGGCCGGTCC TGGAAATATCCGCTGGCGGTGGCCGGCAACGCCATCGGCGACTTCAACATGATCGACGACACCCACGGCCTGATCATCGA GCGCGACAGCCTGGAAGGCTCGCGCTTCAAGGCCTGCGCCGAGGGCAAGGTGGAGCCGACCTGCTTCGACAAGCCGGCCA AGTTCAAGCGCGTCTACAAGGTGGAGTTCTCGCCTGAGACTACGGGCCAGCTGGTGCGCAAGGTGGGTTATATCGACCTG CTCGCCATCAAGGACCCCAATGGCAAGGCGCGGCAGGGCGGCACCGAGGGCGTGCTCGACATGCCCTTCTTCACCATCGA GAACGTGGTGATGGTGAGCCCCACCGAGATCGTGGTGGGCAACGACAACAACCTGCCGTACTCCGCCGGCCGCTTCCCGC AGAAGAACGACGACAACGAGTTCGTCCTGCTCTCCGTGCCGGAGCTGCTGAAGGCGAACTGA
Upstream 100 bases:
>100_bases GGATGTCCGAACGTAACGGAAGTGTCGTCGGCCTGTCGCGGGGCCGTCAACGCTTGCGCGGCAGGTGGAGGGCGCATCGG ACCCTTGGGAGGTTTTCCCC
Downstream 100 bases:
>100_bases GGGTCAGGCGGACAAGCCGGACGACGGCGCAAACGAAAAGGCCGGGCACGCAGGTGCCCGGCCTTCATCATTGGGGACCT GTGGGGCCTACTGCCCGGCC
Product: periplasmic protein
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MRTLSSFTLVLLAGVALATPVFAQDKAGSDKAASAPSEGSAYPAILVGQAVLPAASFVAAPADAPADLKTSGKFTNADRK RIDQVGSVKGVSVLSDKAAPRETGLSLPFEGQPVQGFSGIVSEGDGRFWVLTDNGFGSKANSPDAMLMAHRLKMDFKDGK IERLATLFLHDPDKKVPYPIVMEGTEKRYLTGADFDLESIQVVGDSIWFGEEFGPFLIETDLTGKVKAVFETKVDGKPAR SPDHPAVSTPSAPDAKAAFNVYRSKGFEGMALSPDKTKLYALLEGPLFDAAAGGKEKVGDSEVLRIVEFDIAKRDWTGRS WKYPLAVAGNAIGDFNMIDDTHGLIIERDSLEGSRFKACAEGKVEPTCFDKPAKFKRVYKVEFSPETTGQLVRKVGYIDL LAIKDPNGKARQGGTEGVLDMPFFTIENVVMVSPTEIVVGNDNNLPYSAGRFPQKNDDNEFVLLSVPELLKAN
Sequences:
>Translated_473_residues MRTLSSFTLVLLAGVALATPVFAQDKAGSDKAASAPSEGSAYPAILVGQAVLPAASFVAAPADAPADLKTSGKFTNADRK RIDQVGSVKGVSVLSDKAAPRETGLSLPFEGQPVQGFSGIVSEGDGRFWVLTDNGFGSKANSPDAMLMAHRLKMDFKDGK IERLATLFLHDPDKKVPYPIVMEGTEKRYLTGADFDLESIQVVGDSIWFGEEFGPFLIETDLTGKVKAVFETKVDGKPAR SPDHPAVSTPSAPDAKAAFNVYRSKGFEGMALSPDKTKLYALLEGPLFDAAAGGKEKVGDSEVLRIVEFDIAKRDWTGRS WKYPLAVAGNAIGDFNMIDDTHGLIIERDSLEGSRFKACAEGKVEPTCFDKPAKFKRVYKVEFSPETTGQLVRKVGYIDL LAIKDPNGKARQGGTEGVLDMPFFTIENVVMVSPTEIVVGNDNNLPYSAGRFPQKNDDNEFVLLSVPELLKAN >Mature_473_residues MRTLSSFTLVLLAGVALATPVFAQDKAGSDKAASAPSEGSAYPAILVGQAVLPAASFVAAPADAPADLKTSGKFTNADRK RIDQVGSVKGVSVLSDKAAPRETGLSLPFEGQPVQGFSGIVSEGDGRFWVLTDNGFGSKANSPDAMLMAHRLKMDFKDGK IERLATLFLHDPDKKVPYPIVMEGTEKRYLTGADFDLESIQVVGDSIWFGEEFGPFLIETDLTGKVKAVFETKVDGKPAR SPDHPAVSTPSAPDAKAAFNVYRSKGFEGMALSPDKTKLYALLEGPLFDAAAGGKEKVGDSEVLRIVEFDIAKRDWTGRS WKYPLAVAGNAIGDFNMIDDTHGLIIERDSLEGSRFKACAEGKVEPTCFDKPAKFKRVYKVEFSPETTGQLVRKVGYIDL LAIKDPNGKARQGGTEGVLDMPFFTIENVVMVSPTEIVVGNDNNLPYSAGRFPQKNDDNEFVLLSVPELLKAN
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50910; Mature: 50910
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLSSFTLVLLAGVALATPVFAQDKAGSDKAASAPSEGSAYPAILVGQAVLPAASFVAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCC PADAPADLKTSGKFTNADRKRIDQVGSVKGVSVLSDKAAPRETGLSLPFEGQPVQGFSGI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCHHH VSEGDGRFWVLTDNGFGSKANSPDAMLMAHRLKMDFKDGKIERLATLFLHDPDKKVPYPI HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCE VMEGTEKRYLTGADFDLESIQVVGDSIWFGEEFGPFLIETDLTGKVKAVFETKVDGKPAR EEECCCCEEEECCCCCHHHEEEECCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCC SPDHPAVSTPSAPDAKAAFNVYRSKGFEGMALSPDKTKLYALLEGPLFDAAAGGKEKVGD CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCH SEVLRIVEFDIAKRDWTGRSWKYPLAVAGNAIGDFNMIDDTHGLIIERDSLEGSRFKACA HHHEEEEEEEHHCCCCCCCCCCCCEEECCCCCCCCEEECCCCCEEEEECCCCCCHHHHHC EGKVEPTCFDKPAKFKRVYKVEFSPETTGQLVRKVGYIDLLAIKDPNGKARQGGTEGVLD CCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEE MPFFTIENVVMVSPTEIVVGNDNNLPYSAGRFPQKNDDNEFVLLSVPELLKAN CCCEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCC >Mature Secondary Structure MRTLSSFTLVLLAGVALATPVFAQDKAGSDKAASAPSEGSAYPAILVGQAVLPAASFVAA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCC PADAPADLKTSGKFTNADRKRIDQVGSVKGVSVLSDKAAPRETGLSLPFEGQPVQGFSGI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCHHH VSEGDGRFWVLTDNGFGSKANSPDAMLMAHRLKMDFKDGKIERLATLFLHDPDKKVPYPI HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCE VMEGTEKRYLTGADFDLESIQVVGDSIWFGEEFGPFLIETDLTGKVKAVFETKVDGKPAR EEECCCCEEEECCCCCHHHEEEECCEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCC SPDHPAVSTPSAPDAKAAFNVYRSKGFEGMALSPDKTKLYALLEGPLFDAAAGGKEKVGD CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCH SEVLRIVEFDIAKRDWTGRSWKYPLAVAGNAIGDFNMIDDTHGLIIERDSLEGSRFKACA HHHEEEEEEEHHCCCCCCCCCCCCEEECCCCCCCCEEECCCCCEEEEECCCCCCHHHHHC EGKVEPTCFDKPAKFKRVYKVEFSPETTGQLVRKVGYIDLLAIKDPNGKARQGGTEGVLD CCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEE MPFFTIENVVMVSPTEIVVGNDNNLPYSAGRFPQKNDDNEFVLLSVPELLKAN CCCEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA