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The map label for this gene is yabI [C]

Identifier: 154247131

GI number: 154247131

Start: 3551326

End: 3551850

Strand: Reverse

Name: yabI [C]

Synonym: Xaut_3203

Alternate gene names: 154247131

Gene position: 3551850-3551326 (Counterclockwise)

Preceding gene: 154247135

Following gene: 154247130

Centisome position: 66.9

GC content: 66.29

Gene sequence:

>525_bases
ATGATCGACGTTCAGGCCATTATTGCTGCGACCACCGCGTTTGTTCAGAACAACCACGCTCTCGCTGCTCCGATCGTGTT
CGGCCTCGCCTTTGGCGAATCGCTCGCCCTCGTATCCTTCTTCATTCCGGCGACCGTGCTTCTGCTCGCCATCGGCGCGC
TGATCGAGGCGAGCGGGCTGCACTTCTTCCCCATCTGGCTGGCCGCCGCCACCGGCGCGGCGCTGGGGGACGCCATCTCC
TACTGGTTCGGTTTCCACTACAAGGAGCGGGCGAAGACCTTCTGGCCGCTGTCGAAACGGCCCGACCTGGTGGCTCGCGC
GGAGGACTTCTTCCATCGCTTCGGCGTCTGGGGCGTGGCCATCGGCCGCTTCTTCGGGCCCGTGCGCGCGGTGGTGCCGC
TGGTGGCCGGCGTACTCGCCATGCGCCAGACCCATTTCCAGATGGCCAACGTCGCCAGCGCGGCGGTCTGGGCCTTCGCC
ATGCTTGCCCCTGGTGCGGCCGCCTTCAAGCTGTTCGGCTTCTGA

Upstream 100 bases:

>100_bases
CGCCCAAATCCTGCGCCATGACCGTCCCACCGCAGGGTGACACCGGGACCGCCCCTTGCGCGAGGAGGCCGGCCTTCCGA
TCTCTGCGGCTGGAGGAGAC

Downstream 100 bases:

>100_bases
GGTCGATCGGGTCGGGCCTTCGCGGCCTGGCCCGGCCGCCGGAAGATGCCTGAAGGGTTGACCGGACCGCCCGCCGGCAG
CGCCGCGGCGCCATGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MIDVQAIIAATTAFVQNNHALAAPIVFGLAFGESLALVSFFIPATVLLLAIGALIEASGLHFFPIWLAAATGAALGDAIS
YWFGFHYKERAKTFWPLSKRPDLVARAEDFFHRFGVWGVAIGRFFGPVRAVVPLVAGVLAMRQTHFQMANVASAAVWAFA
MLAPGAAAFKLFGF

Sequences:

>Translated_174_residues
MIDVQAIIAATTAFVQNNHALAAPIVFGLAFGESLALVSFFIPATVLLLAIGALIEASGLHFFPIWLAAATGAALGDAIS
YWFGFHYKERAKTFWPLSKRPDLVARAEDFFHRFGVWGVAIGRFFGPVRAVVPLVAGVLAMRQTHFQMANVASAAVWAFA
MLAPGAAAFKLFGF
>Mature_174_residues
MIDVQAIIAATTAFVQNNHALAAPIVFGLAFGESLALVSFFIPATVLLLAIGALIEASGLHFFPIWLAAATGAALGDAIS
YWFGFHYKERAKTFWPLSKRPDLVARAEDFFHRFGVWGVAIGRFFGPVRAVVPLVAGVLAMRQTHFQMANVASAAVWAFA
MLAPGAAAFKLFGF

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=155, Percent_Identity=34.8387096774194, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 18673; Mature: 18673

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDVQAIIAATTAFVQNNHALAAPIVFGLAFGESLALVSFFIPATVLLLAIGALIEASGL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HFFPIWLAAATGAALGDAISYWFGFHYKERAKTFWPLSKRPDLVARAEDFFHRFGVWGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IGRFFGPVRAVVPLVAGVLAMRQTHFQMANVASAAVWAFAMLAPGAAAFKLFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MIDVQAIIAATTAFVQNNHALAAPIVFGLAFGESLALVSFFIPATVLLLAIGALIEASGL
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HFFPIWLAAATGAALGDAISYWFGFHYKERAKTFWPLSKRPDLVARAEDFFHRFGVWGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IGRFFGPVRAVVPLVAGVLAMRQTHFQMANVASAAVWAFAMLAPGAAAFKLFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]