| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247123
Identifier: 154247123
GI number: 154247123
Start: 3541129
End: 3542250
Strand: Reverse
Name: 154247123
Synonym: Xaut_3194
Alternate gene names: NA
Gene position: 3542250-3541129 (Counterclockwise)
Preceding gene: 154247124
Following gene: 154247122
Centisome position: 66.72
GC content: 71.03
Gene sequence:
>1122_bases ATGAGAGACGGTCGGATGTTTTACCGCTTTTCAGCCCCCAGCCGCCGTGCCGTTCTCGGCCTCGTGCGTGGCTTGGCGCT CGGCCTTGCACTTGCCCCGGTCGCTGCGCCGGTCCAAGCCGCCAGCCCCGCGCTCGACCCGGTGCCGCTCATCGAGACCT GGCTGTTGCCGCGCTACGATGCCTTCGTCGGCGCTACCAAGGCGCAGGCCGCCGCCTGGGCGACCTTCTGCGCCAAGCCG GACGCCGCTGGCGTGCCTGCGCTGAAGGAGGCCTACGGCAAGACGGCGGACGCCTGGAACGCGGTGGAATTCGTCACCTT CGGCCCCATCAGCCTGTCACTGCGGGCCGATCGCATCTCCTTCTTCCCAGACCGGCGTAACGCCATCACCCGCGGCCTGG CCGAGATCATTGGCGATTCCGACGCAGGCCGGCTGGAACCAACCCGCTTCGCCCAGTCCAGCGCATCGGTGCAGGGCCTG CCGGCGCTGGAGCGCCTGCTTTATGAGGAGGGCGCCGCCGATGCCCTCGTCGCCGGCCCGGAAGCGGCGCGGCGCTGCGC CCTCGGTACTGCCATCGCCACCAATCTCGCCGCCATCGCCAGCGAGATCCGCACCGCCTGGGGCGACAAGGCCTCGGGCG TGCTCGGCGCCATCGTCTCCGGCAAGGGCGACCCGGCCCTGTTCCCGGACGTGGGCGCCCTGCCCGGCATGATCCTCACC GACCTGTCCGGCGCCTACCAGCGGGTGACCGACACCAAGATCCTGCCCGTGCTCGGCACCGGCCCCGCCGAGGCCAAGCC CACCCTCGCCGACAACTGGCGCTCGGGCCGTTCCGGGCGGGTGGCCGCGAACATGATCAGGAGCGCCGACGCCCTGCTGG TGGCGGTTGGCGCGCAGATGCCAAGCCGGCCGCAATATGTGGTCAACAAGGCCGCCACCGGCGCGGATGCCGCCGCCGAC AAGCTGCCCGCCGATATCGGCGCCGCCGCTGGCACGGCCCCGGGCGCCAGCGCGCTGCAGGCCGCCATCAAGACGTTCAA GGTGGCGCAGGCGAGCGTCTACAAGCCTGTGGCCTCCTATTTCGGCATCTCGCTGGGCTTCAATGCCCTCGACGGGGACT GA
Upstream 100 bases:
>100_bases CCTGGCACGGCGGAGAGGCGGCGGAAGCCGCGCGGCGCTTCGACGCCCTCTCCGCGCCGGACCAGACGGCCTTGGTGCGT TACGTGTCCTCGCTGTAGTT
Downstream 100 bases:
>100_bases GCATGCGCCTGCGCCTCGACCACGCCGGGATTTTGGACCGGCGGGGCTTCCTTATGGGCGCGGCGGCGCTGCTCGCTGCC GGTCCGCTGGGCGCCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRDGRMFYRFSAPSRRAVLGLVRGLALGLALAPVAAPVQAASPALDPVPLIETWLLPRYDAFVGATKAQAAAWATFCAKP DAAGVPALKEAYGKTADAWNAVEFVTFGPISLSLRADRISFFPDRRNAITRGLAEIIGDSDAGRLEPTRFAQSSASVQGL PALERLLYEEGAADALVAGPEAARRCALGTAIATNLAAIASEIRTAWGDKASGVLGAIVSGKGDPALFPDVGALPGMILT DLSGAYQRVTDTKILPVLGTGPAEAKPTLADNWRSGRSGRVAANMIRSADALLVAVGAQMPSRPQYVVNKAATGADAAAD KLPADIGAAAGTAPGASALQAAIKTFKVAQASVYKPVASYFGISLGFNALDGD
Sequences:
>Translated_373_residues MRDGRMFYRFSAPSRRAVLGLVRGLALGLALAPVAAPVQAASPALDPVPLIETWLLPRYDAFVGATKAQAAAWATFCAKP DAAGVPALKEAYGKTADAWNAVEFVTFGPISLSLRADRISFFPDRRNAITRGLAEIIGDSDAGRLEPTRFAQSSASVQGL PALERLLYEEGAADALVAGPEAARRCALGTAIATNLAAIASEIRTAWGDKASGVLGAIVSGKGDPALFPDVGALPGMILT DLSGAYQRVTDTKILPVLGTGPAEAKPTLADNWRSGRSGRVAANMIRSADALLVAVGAQMPSRPQYVVNKAATGADAAAD KLPADIGAAAGTAPGASALQAAIKTFKVAQASVYKPVASYFGISLGFNALDGD >Mature_373_residues MRDGRMFYRFSAPSRRAVLGLVRGLALGLALAPVAAPVQAASPALDPVPLIETWLLPRYDAFVGATKAQAAAWATFCAKP DAAGVPALKEAYGKTADAWNAVEFVTFGPISLSLRADRISFFPDRRNAITRGLAEIIGDSDAGRLEPTRFAQSSASVQGL PALERLLYEEGAADALVAGPEAARRCALGTAIATNLAAIASEIRTAWGDKASGVLGAIVSGKGDPALFPDVGALPGMILT DLSGAYQRVTDTKILPVLGTGPAEAKPTLADNWRSGRSGRVAANMIRSADALLVAVGAQMPSRPQYVVNKAATGADAAAD KLPADIGAAAGTAPGASALQAAIKTFKVAQASVYKPVASYFGISLGFNALDGD
Specific function: Unknown
COG id: COG3489
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38317; Mature: 38317
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDGRMFYRFSAPSRRAVLGLVRGLALGLALAPVAAPVQAASPALDPVPLIETWLLPRYD CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCCHH AFVGATKAQAAAWATFCAKPDAAGVPALKEAYGKTADAWNAVEFVTFGPISLSLRADRIS HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEEEEEECCHHH FFPDRRNAITRGLAEIIGDSDAGRLEPTRFAQSSASVQGLPALERLLYEEGAADALVAGP CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECCH EAARRCALGTAIATNLAAIASEIRTAWGDKASGVLGAIVSGKGDPALFPDVGALPGMILT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCCCCCCCCCHHHH DLSGAYQRVTDTKILPVLGTGPAEAKPTLADNWRSGRSGRVAANMIRSADALLVAVGAQM HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCC PSRPQYVVNKAATGADAAADKLPADIGAAAGTAPGASALQAAIKTFKVAQASVYKPVASY CCCCHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGISLGFNALDGD HHHHCCCCCCCCC >Mature Secondary Structure MRDGRMFYRFSAPSRRAVLGLVRGLALGLALAPVAAPVQAASPALDPVPLIETWLLPRYD CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCCHH AFVGATKAQAAAWATFCAKPDAAGVPALKEAYGKTADAWNAVEFVTFGPISLSLRADRIS HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEEEEEECCHHH FFPDRRNAITRGLAEIIGDSDAGRLEPTRFAQSSASVQGLPALERLLYEEGAADALVAGP CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEECCH EAARRCALGTAIATNLAAIASEIRTAWGDKASGVLGAIVSGKGDPALFPDVGALPGMILT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCCCCCCCCCHHHH DLSGAYQRVTDTKILPVLGTGPAEAKPTLADNWRSGRSGRVAANMIRSADALLVAVGAQM HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCC PSRPQYVVNKAATGADAAADKLPADIGAAAGTAPGASALQAAIKTFKVAQASVYKPVASY CCCCHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGISLGFNALDGD HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA