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The map label for this gene is perM [C]

Identifier: 154247058

GI number: 154247058

Start: 3470800

End: 3472056

Strand: Reverse

Name: perM [C]

Synonym: Xaut_3129

Alternate gene names: 154247058

Gene position: 3472056-3470800 (Counterclockwise)

Preceding gene: 154247059

Following gene: 154247057

Centisome position: 65.4

GC content: 67.78

Gene sequence:

>1257_bases
ATGGATCGTGAGTTGATCGGCGAACGCGACCCCCGCAACTCCGCAGCCGCCGTCAGCCCGGCGCACGGCGGCCGGGTTCG
TGCGCCCGGCGTGCCGGACGATCCTGCGCCAAGCCGCCCCGCGTCGGACCGCCGCCCGCTTGACTTGGAGCCAGAGGAAA
GCACCCTGCCGGTCCGCTTCCAGATGCGCTTCTGGGTGACCGCCCTCATCCTCACCGCCATCGCGCTGTGGCTGTTGAGC
GGCATCCTGCTGCCGTTCGTGGCGGGCATCGTGCTGGCTTATTTCCTCAATCCCGTGGTGGCGCGCCTGGAACGCATCGG
CGTCGCCCGCACCCTCTCCGCCCTGGTGGTGGTGGGGATCATGCTGCTGCTGGTGGTGCTGTTCTTCCTGCTCGCCCTGC
CGCTGCTGTCCTCGCAGATGTTCGAGTTCATCCAGCGGCTGCCCGCCTATGTGGCCCGGCTGCAGGGGCTCTTGACCGAG
GAAAACCGCGAGTGGCTGAGCGGCATCGTCGGCGACCGCCTGCCCGACATGCAGCGCTCCATCTCCGATCTCATGACGCA
GGGGGTCAGCCACCTGGTGGGCCTGCTCTCCTCCGTGTGGTCCGGGGGGCAGGCGCTGATCGCGCTGTTCGCGCTGCTGG
TGGTGACGCCGGTGGTGGTCTTCTACATCCTGTGCGACTGGAACAACATGGTCGCCTACGTGGACCAGCTGGTGCCGCTG
CCCCATCGCACGGAAGTGCGGGGCCTTGCCCGCGCCATGGACATGGCGGTGGCTGGCTTCGTGCGCGGGCAGGCCATGGT
GTGCCTGCTGCTGGGCACCTTCTATGCGGTGGCCCTGACCATGGCGGGGCTGAATTTCGGCCTGCTCATCGGCATCGTCT
CCGGCGTCATCACCTTCATTCCCTATGTGGGCTCGCTCACCGGCTTCGTGCTGGCCATGGGCGTCGCCATCGTCCAGTTC
TTTCCCGACTGGGGCATGATCGGCACGGTGCTGGCCATCTTCGTCACCGGCCAGACCATCGAGGGCTACGTGCTCTCGCC
CAAGCTGGTGGGCGACAGCATCGGGGTGCATCCGGTCTGGCTCATGTTCGCCCTGTTCGCCTTCGGCTACCTGTTCGGCT
TCGTGGGCCTGCTGCTCGCGGTGCCGCTCACGGCGGTGACGGGGGTGCTGGTGCGCTTCGTGATCACCCGCTACATGCAG
TCGGCGCTGTACCAGGGCACCCCGGACGACGCCCTGCCACCACCGGGGACACCCTGA

Upstream 100 bases:

>100_bases
GCTGCCTATCTCGCCGCATGGACGCGCCACGTTGCGAATTGACGCACAGTCAGTTGAAACTGGCGAACCGACGAATGGCG
CACTCACGAACGGCAAGCTG

Downstream 100 bases:

>100_bases
GCATGGCAGAGCGCGACGGACGTCCGCGCCAGCTTCCCCTCGACCTGCCGGCCTACCCGGCGCTCCGGCGCGAGGATTTC
CTCGCAGCGCCCGGCAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MDRELIGERDPRNSAAAVSPAHGGRVRAPGVPDDPAPSRPASDRRPLDLEPEESTLPVRFQMRFWVTALILTAIALWLLS
GILLPFVAGIVLAYFLNPVVARLERIGVARTLSALVVVGIMLLLVVLFFLLALPLLSSQMFEFIQRLPAYVARLQGLLTE
ENREWLSGIVGDRLPDMQRSISDLMTQGVSHLVGLLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQLVPL
PHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVITFIPYVGSLTGFVLAMGVAIVQF
FPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVHPVWLMFALFAFGYLFGFVGLLLAVPLTAVTGVLVRFVITRYMQ
SALYQGTPDDALPPPGTP

Sequences:

>Translated_418_residues
MDRELIGERDPRNSAAAVSPAHGGRVRAPGVPDDPAPSRPASDRRPLDLEPEESTLPVRFQMRFWVTALILTAIALWLLS
GILLPFVAGIVLAYFLNPVVARLERIGVARTLSALVVVGIMLLLVVLFFLLALPLLSSQMFEFIQRLPAYVARLQGLLTE
ENREWLSGIVGDRLPDMQRSISDLMTQGVSHLVGLLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQLVPL
PHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVITFIPYVGSLTGFVLAMGVAIVQF
FPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVHPVWLMFALFAFGYLFGFVGLLLAVPLTAVTGVLVRFVITRYMQ
SALYQGTPDDALPPPGTP
>Mature_418_residues
MDRELIGERDPRNSAAAVSPAHGGRVRAPGVPDDPAPSRPASDRRPLDLEPEESTLPVRFQMRFWVTALILTAIALWLLS
GILLPFVAGIVLAYFLNPVVARLERIGVARTLSALVVVGIMLLLVVLFFLLALPLLSSQMFEFIQRLPAYVARLQGLLTE
ENREWLSGIVGDRLPDMQRSISDLMTQGVSHLVGLLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQLVPL
PHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVITFIPYVGSLTGFVLAMGVAIVQF
FPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVHPVWLMFALFAFGYLFGFVGLLLAVPLTAVTGVLVRFVITRYMQ
SALYQGTPDDALPPPGTP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=328, Percent_Identity=26.5243902439024, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082271, Length=315, Percent_Identity=24.1269841269841, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 45237; Mature: 45237

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRELIGERDPRNSAAAVSPAHGGRVRAPGVPDDPAPSRPASDRRPLDLEPEESTLPVRF
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QMRFWVTALILTAIALWLLSGILLPFVAGIVLAYFLNPVVARLERIGVARTLSALVVVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLLVVLFFLLALPLLSSQMFEFIQRLPAYVARLQGLLTEENREWLSGIVGDRLPDMQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ISDLMTQGVSHLVGLLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQLVPL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVITFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYVGSLTGFVLAMGVAIVQFFPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVHPVW
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCHHH
LMFALFAFGYLFGFVGLLLAVPLTAVTGVLVRFVITRYMQSALYQGTPDDALPPPGTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRELIGERDPRNSAAAVSPAHGGRVRAPGVPDDPAPSRPASDRRPLDLEPEESTLPVRF
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QMRFWVTALILTAIALWLLSGILLPFVAGIVLAYFLNPVVARLERIGVARTLSALVVVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLLVVLFFLLALPLLSSQMFEFIQRLPAYVARLQGLLTEENREWLSGIVGDRLPDMQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ISDLMTQGVSHLVGLLSSVWSGGQALIALFALLVVTPVVVFYILCDWNNMVAYVDQLVPL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PHRTEVRGLARAMDMAVAGFVRGQAMVCLLLGTFYAVALTMAGLNFGLLIGIVSGVITFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYVGSLTGFVLAMGVAIVQFFPDWGMIGTVLAIFVTGQTIEGYVLSPKLVGDSIGVHPVW
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCHHH
LMFALFAFGYLFGFVGLLLAVPLTAVTGVLVRFVITRYMQSALYQGTPDDALPPPGTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]