| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is guaB [H]
Identifier: 154247052
GI number: 154247052
Start: 3463617
End: 3465149
Strand: Direct
Name: guaB [H]
Synonym: Xaut_3123
Alternate gene names: 154247052
Gene position: 3463617-3465149 (Clockwise)
Preceding gene: 154247051
Following gene: 154247061
Centisome position: 65.24
GC content: 68.43
Gene sequence:
>1533_bases ATGACCACCCCGATTTCGAACGTCCCCCCGTCTGCGGCCATCTCCAGCGGCCGCGCGCCGTTCCGCGAGGCGCTGACGTT CGACGACGTGCTGCTGACCCCGGGCGCCTCCGAGGTGATGCCGGGGCAGGTGGATGTCGCCACCCAGCTCACCAAGACCA TCAGCCTCAACCTGCCCATCATCTCTGCCGCCATGGATACGGTGACCGAATCGCGCCTCGCCATCGCCATGGCGCAGGCC GGCGGCATCGGCGTCATCCACCGCAACCTCACGCCCGAGCTTCAGGCCGAGCATGTGCGGCAGGTGAAGAAGTACGAATC GGGCATGGTGGTGAACCCGGTCACCATCCATCCCGACGAGACACTCGCCCACGCCCTCACCCTCATGAAGCGCTACGGCA TCTCCGGCATTCCGGTGGTGGAGCGCGGCGTGGGTGCCATCGCCGGTCGGCTGGTCGGCATCCTCACCAATCGCGACGTG CGCTTCGCCCACAATCCCGAGCAGCGCGTGGCCGAGCTGATGACCAAGGACCGGCTCATCACCGTGCGCGAGGGCCAGGT GAACCAGGAGGAGGCCAAGAGCCTCCTGCACCAGTACCGCATCGAGAAGCTGCTGGTGGTGGACAATGACGAGCGCTGCG TCGGCCTCATCACCGTCAAGGACATCGAGAAGGCGGTGGCCTATCCCCACGCCGCCAAGGACGAGCAGGGCCGCCTGCGG GTCGCTGCCGCGACGACCGTCGGTCCCGACGGCTTCGAGCGCACCGAGCGCCTGATCGATGCCGGCGTCGACCTCGTGGT GGTGGATACCGCCCACGGCCATTCCCGCAAGGTGCTGGACCAAGTGGAGCGCATCAAGAAGCTCTCCAACCGCACCCAGA TCCTCGCCGGCAACATCGCCACCGCCGAGGGGGCCCGCGCGCTCATCGATGCCGGGGCGGACGCGGTGAAGGTGGGTATC GGCCCCGGCTCCATCTGCACCACCCGCATCGTGGCGGGCGTTGGCGTGCCCCAGCTCACCGCGGTGATGGATGCGGTGGA AGCCGCCCACGCCACCGGCACCCCGGTGATCGCCGACGGCGGCATCAAGTATTCCGGCGACCTCGCCAAGGCGCTGGCGG CCGGTGCCTCCGCCGCCATGGTAGGCTCGTTGCTCGCCGGCACCGACGAAAGCCCCGGCGAGGTGTTCCTCTATCAGGGC CGCTCCTACAAGTCGTATCGCGGCATGGGCTCGGTGGGCGCCATGGCCCGCGGCTCGGCCGACCGCTACTTCCAGGCGGA AGTGCGCGACACGCTCAAGCTGGTGCCGGAAGGCATCGAGGGCCAGGTGGCCTACAAGGGTCCGGTGGGGGCGGTGCTCC ACCAGCTTGCCGGCGGCTTGCGGGCAGCCATGGGCTATGTGGGCGGCAGCACGCTGAAGGAATTCCGCGAGAAGGCCCAG TTCGTGCGCATCTCTTCCGCCGGCCTGCGCGAGAGCCATGTGCATGACGTGACCATCACCCGCGAGAGCCCGAACTATCC CACCAGCGTGTGA
Upstream 100 bases:
>100_bases GGTATCGGCCACTGCCAACTCGTAGCGGGGTGTTTGACAGCAACCCGTTCCGGCCCCGATCCAGCGGCCCGGCTTCCCGC GCCGCCTTAAGGAGTTGGCC
Downstream 100 bases:
>100_bases CAGCTATGGGTGATGAGCTTGGCCCATCACCCATCGGTACAGGCCCGCGCGGCGCTTGAGCGCGACCTCCTTGGCGTCGG TCAAAGACCGGCACCGCTCG
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTTPISNVPPSAAISSGRAPFREALTFDDVLLTPGASEVMPGQVDVATQLTKTISLNLPIISAAMDTVTESRLAIAMAQA GGIGVIHRNLTPELQAEHVRQVKKYESGMVVNPVTIHPDETLAHALTLMKRYGISGIPVVERGVGAIAGRLVGILTNRDV RFAHNPEQRVAELMTKDRLITVREGQVNQEEAKSLLHQYRIEKLLVVDNDERCVGLITVKDIEKAVAYPHAAKDEQGRLR VAAATTVGPDGFERTERLIDAGVDLVVVDTAHGHSRKVLDQVERIKKLSNRTQILAGNIATAEGARALIDAGADAVKVGI GPGSICTTRIVAGVGVPQLTAVMDAVEAAHATGTPVIADGGIKYSGDLAKALAAGASAAMVGSLLAGTDESPGEVFLYQG RSYKSYRGMGSVGAMARGSADRYFQAEVRDTLKLVPEGIEGQVAYKGPVGAVLHQLAGGLRAAMGYVGGSTLKEFREKAQ FVRISSAGLRESHVHDVTITRESPNYPTSV
Sequences:
>Translated_510_residues MTTPISNVPPSAAISSGRAPFREALTFDDVLLTPGASEVMPGQVDVATQLTKTISLNLPIISAAMDTVTESRLAIAMAQA GGIGVIHRNLTPELQAEHVRQVKKYESGMVVNPVTIHPDETLAHALTLMKRYGISGIPVVERGVGAIAGRLVGILTNRDV RFAHNPEQRVAELMTKDRLITVREGQVNQEEAKSLLHQYRIEKLLVVDNDERCVGLITVKDIEKAVAYPHAAKDEQGRLR VAAATTVGPDGFERTERLIDAGVDLVVVDTAHGHSRKVLDQVERIKKLSNRTQILAGNIATAEGARALIDAGADAVKVGI GPGSICTTRIVAGVGVPQLTAVMDAVEAAHATGTPVIADGGIKYSGDLAKALAAGASAAMVGSLLAGTDESPGEVFLYQG RSYKSYRGMGSVGAMARGSADRYFQAEVRDTLKLVPEGIEGQVAYKGPVGAVLHQLAGGLRAAMGYVGGSTLKEFREKAQ FVRISSAGLRESHVHDVTITRESPNYPTSV >Mature_509_residues TTPISNVPPSAAISSGRAPFREALTFDDVLLTPGASEVMPGQVDVATQLTKTISLNLPIISAAMDTVTESRLAIAMAQAG GIGVIHRNLTPELQAEHVRQVKKYESGMVVNPVTIHPDETLAHALTLMKRYGISGIPVVERGVGAIAGRLVGILTNRDVR FAHNPEQRVAELMTKDRLITVREGQVNQEEAKSLLHQYRIEKLLVVDNDERCVGLITVKDIEKAVAYPHAAKDEQGRLRV AAATTVGPDGFERTERLIDAGVDLVVVDTAHGHSRKVLDQVERIKKLSNRTQILAGNIATAEGARALIDAGADAVKVGIG PGSICTTRIVAGVGVPQLTAVMDAVEAAHATGTPVIADGGIKYSGDLAKALAAGASAAMVGSLLAGTDESPGEVFLYQGR SYKSYRGMGSVGAMARGSADRYFQAEVRDTLKLVPEGIEGQVAYKGPVGAVLHQLAGGLRAAMGYVGGSTLKEFREKAQF VRISSAGLRESHVHDVTITRESPNYPTSV
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=484, Percent_Identity=40.2892561983471, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI217035146, Length=458, Percent_Identity=40.6113537117904, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI156616279, Length=458, Percent_Identity=40.6113537117904, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI34328930, Length=458, Percent_Identity=40.6113537117904, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI34328928, Length=458, Percent_Identity=40.6113537117904, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI217035152, Length=452, Percent_Identity=40.7079646017699, Blast_Score=320, Evalue=2e-87, Organism=Homo sapiens, GI217035148, Length=458, Percent_Identity=39.7379912663755, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI217035150, Length=458, Percent_Identity=37.117903930131, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=39.6761133603239, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=39.6761133603239, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=39.6761133603239, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=39.6761133603239, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI156104880, Length=248, Percent_Identity=37.9032258064516, Blast_Score=165, Evalue=1e-40, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=60.6995884773662, Blast_Score=530, Evalue=1e-152, Organism=Escherichia coli, GI1786293, Length=237, Percent_Identity=40.084388185654, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71994385, Length=505, Percent_Identity=35.4455445544554, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71994389, Length=431, Percent_Identity=36.8909512761021, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI17560440, Length=244, Percent_Identity=38.5245901639344, Blast_Score=169, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6323585, Length=490, Percent_Identity=38.7755102040816, Blast_Score=327, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=490, Percent_Identity=40.2040816326531, Blast_Score=322, Evalue=1e-88, Organism=Saccharomyces cerevisiae, GI6322012, Length=493, Percent_Identity=38.3367139959432, Blast_Score=320, Evalue=4e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=344, Percent_Identity=38.953488372093, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6319353, Length=120, Percent_Identity=40.8333333333333, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=39.6694214876033, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=39.6694214876033, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=40.0452488687783, Blast_Score=301, Evalue=6e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 53948; Mature: 53817
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPISNVPPSAAISSGRAPFREALTFDDVLLTPGASEVMPGQVDVATQLTKTISLNLPI CCCCCCCCCCCHHHCCCCCCHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHEEECCCH ISAAMDTVTESRLAIAMAQAGGIGVIHRNLTPELQAEHVRQVKKYESGMVVNPVTIHPDE HHHHHHHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECCEEECCCH TLAHALTLMKRYGISGIPVVERGVGAIAGRLVGILTNRDVRFAHNPEQRVAELMTKDRLI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCEEECCCHHHHHHHHHHCCCEE TVREGQVNQEEAKSLLHQYRIEKLLVVDNDERCVGLITVKDIEKAVAYPHAAKDEQGRLR EEECCCCCHHHHHHHHHHHHHCEEEEEECCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEE VAAATTVGPDGFERTERLIDAGVDLVVVDTAHGHSRKVLDQVERIKKLSNRTQILAGNIA EEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCC TAEGARALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAVMDAVEAAHATGTPVIADG CCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECC GIKYSGDLAKALAAGASAAMVGSLLAGTDESPGEVFLYQGRSYKSYRGMGSVGAMARGSA CEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCC DRYFQAEVRDTLKLVPEGIEGQVAYKGPVGAVLHQLAGGLRAAMGYVGGSTLKEFREKAQ CHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FVRISSAGLRESHVHDVTITRESPNYPTSV EEEECCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure TTPISNVPPSAAISSGRAPFREALTFDDVLLTPGASEVMPGQVDVATQLTKTISLNLPI CCCCCCCCCCHHHCCCCCCHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHEEECCCH ISAAMDTVTESRLAIAMAQAGGIGVIHRNLTPELQAEHVRQVKKYESGMVVNPVTIHPDE HHHHHHHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECCEEECCCH TLAHALTLMKRYGISGIPVVERGVGAIAGRLVGILTNRDVRFAHNPEQRVAELMTKDRLI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCEEECCCHHHHHHHHHHCCCEE TVREGQVNQEEAKSLLHQYRIEKLLVVDNDERCVGLITVKDIEKAVAYPHAAKDEQGRLR EEECCCCCHHHHHHHHHHHHHCEEEEEECCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEE VAAATTVGPDGFERTERLIDAGVDLVVVDTAHGHSRKVLDQVERIKKLSNRTQILAGNIA EEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCC TAEGARALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAVMDAVEAAHATGTPVIADG CCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECC GIKYSGDLAKALAAGASAAMVGSLLAGTDESPGEVFLYQGRSYKSYRGMGSVGAMARGSA CEEECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHCCCC DRYFQAEVRDTLKLVPEGIEGQVAYKGPVGAVLHQLAGGLRAAMGYVGGSTLKEFREKAQ CHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FVRISSAGLRESHVHDVTITRESPNYPTSV EEEECCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA