| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247026
Identifier: 154247026
GI number: 154247026
Start: 3437999
End: 3438904
Strand: Reverse
Name: 154247026
Synonym: Xaut_3097
Alternate gene names: NA
Gene position: 3438904-3437999 (Counterclockwise)
Preceding gene: 154247027
Following gene: 154247025
Centisome position: 64.78
GC content: 69.54
Gene sequence:
>906_bases ATGACCGACCTTACCGACCTCTTCCCCGGCTTCGACTCTCACTATGTGGACACCAGGGCCGGCCGCATCTTCCTGCGGCA GGGCGGCACCGGATCGCCGCTGCTGCTGCTCCACGGTTTCCCGCAGAGCCATGTCATGTGGCACAAGGTGGCGACCAAGC TCGCCGAGCAGCACACCCTCATCATCCCCGATCTGCCCGGCTACGGCTGGAGCGCGGCGCCGGACGAAGGCACGGATCAC GCCCCCTATTCCAAACGTGCCATGGCCGCCGCCATGGTGGAGGTGATGGAGCATCTGGGCTTCGCTCATTTCGCGCTCAT GGGCCACGATCGCGGCGCACGGGCCGGCTACCGGCTCGGCCTCGACCATCCCGGCCGGCTGGACCGCCTGGTGGTGCTGG ACATCGTCCCCACCTACGTCATGTGGCACAAGATGGACCGGGCACGGGCGCTGCAAGTGTACCACTGGTCCATGCTGGCC CAGCCCAAGCCCCTGCCGGAGAAGCTCATCGGCTCCCATCCCGCCTGGTTCCTCGACTGGACCATGGCGAGCTGGACCGG ATCCAAGGACCTCTCGCCCTTCGATCCCCGCGCCATGGCCCAATACCGCGCTGCCATCTCCTCGCCCGACCGGCTCCACG CCATGTGCGAGGACTACCGGGCCGGCGCCACCATCGACCTCGCCCATGACGAGGCGGATCTGGCCGCCGGGCGCACCCTC TCCTGCCCCACCTTCGCCCTGTGGGGCGCGGCCGGCATCCCGAGCCGTGGCGCAAGCCCGCTGGAGGCCTGGAAGGTCTT CGCGCCCAAGCTGGAAGGCGCGGCGGTGGAAGCCGGCCACTTCGTCGCCGAGGAGGCGCCGGGGGCGGTGCTGGCCGCTG TGCTGCCGTTTCTGGCGGGGGACTGA
Upstream 100 bases:
>100_bases CCTGCCCGAGGCCTGCGCGGCGGTGCTGGGCGCCAGATGAAGAACCGCATGAGGGCGTGAACCCGCCCGGCGTGGGGAAG CAACGATAACGGAGGACGCC
Downstream 100 bases:
>100_bases TACCAGCGGCATCGGCCTGAGATCCCGGCCGCGGAAAAAGGATTTCGCGACCCGACGGACCCGCGAATTCTTCCATCCCT CAAACAGTGGATGTGCTGGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTDLTDLFPGFDSHYVDTRAGRIFLRQGGTGSPLLLLHGFPQSHVMWHKVATKLAEQHTLIIPDLPGYGWSAAPDEGTDH APYSKRAMAAAMVEVMEHLGFAHFALMGHDRGARAGYRLGLDHPGRLDRLVVLDIVPTYVMWHKMDRARALQVYHWSMLA QPKPLPEKLIGSHPAWFLDWTMASWTGSKDLSPFDPRAMAQYRAAISSPDRLHAMCEDYRAGATIDLAHDEADLAAGRTL SCPTFALWGAAGIPSRGASPLEAWKVFAPKLEGAAVEAGHFVAEEAPGAVLAAVLPFLAGD
Sequences:
>Translated_301_residues MTDLTDLFPGFDSHYVDTRAGRIFLRQGGTGSPLLLLHGFPQSHVMWHKVATKLAEQHTLIIPDLPGYGWSAAPDEGTDH APYSKRAMAAAMVEVMEHLGFAHFALMGHDRGARAGYRLGLDHPGRLDRLVVLDIVPTYVMWHKMDRARALQVYHWSMLA QPKPLPEKLIGSHPAWFLDWTMASWTGSKDLSPFDPRAMAQYRAAISSPDRLHAMCEDYRAGATIDLAHDEADLAAGRTL SCPTFALWGAAGIPSRGASPLEAWKVFAPKLEGAAVEAGHFVAEEAPGAVLAAVLPFLAGD >Mature_300_residues TDLTDLFPGFDSHYVDTRAGRIFLRQGGTGSPLLLLHGFPQSHVMWHKVATKLAEQHTLIIPDLPGYGWSAAPDEGTDHA PYSKRAMAAAMVEVMEHLGFAHFALMGHDRGARAGYRLGLDHPGRLDRLVVLDIVPTYVMWHKMDRARALQVYHWSMLAQ PKPLPEKLIGSHPAWFLDWTMASWTGSKDLSPFDPRAMAQYRAAISSPDRLHAMCEDYRAGATIDLAHDEADLAAGRTLS CPTFALWGAAGIPSRGASPLEAWKVFAPKLEGAAVEAGHFVAEEAPGAVLAAVLPFLAGD
Specific function: Catalyzes the hydrolytic defluorination of fluoroacetate to produce glycolate. Has low activity towards chloroacetate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324392, Length=121, Percent_Identity=32.2314049586777, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.3 [H]
Molecular weight: Translated: 32850; Mature: 32719
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTDLFPGFDSHYVDTRAGRIFLRQGGTGSPLLLLHGFPQSHVMWHKVATKLAEQHTL CCCHHHHCCCCCCCEEECCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEE IIPDLPGYGWSAAPDEGTDHAPYSKRAMAAAMVEVMEHLGFAHFALMGHDRGARAGYRLG EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEC LDHPGRLDRLVVLDIVPTYVMWHKMDRARALQVYHWSMLAQPKPLPEKLIGSHPAWFLDW CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEE TMASWTGSKDLSPFDPRAMAQYRAAISSPDRLHAMCEDYRAGATIDLAHDEADLAAGRTL EECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCC SCPTFALWGAAGIPSRGASPLEAWKVFAPKLEGAAVEAGHFVAEEAPGAVLAAVLPFLAG CCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCHHHHCCCCHHHHHHHHHHCC D C >Mature Secondary Structure TDLTDLFPGFDSHYVDTRAGRIFLRQGGTGSPLLLLHGFPQSHVMWHKVATKLAEQHTL CCHHHHCCCCCCCEEECCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEE IIPDLPGYGWSAAPDEGTDHAPYSKRAMAAAMVEVMEHLGFAHFALMGHDRGARAGYRLG EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEC LDHPGRLDRLVVLDIVPTYVMWHKMDRARALQVYHWSMLAQPKPLPEKLIGSHPAWFLDW CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEE TMASWTGSKDLSPFDPRAMAQYRAAISSPDRLHAMCEDYRAGATIDLAHDEADLAAGRTL EECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCC SCPTFALWGAAGIPSRGASPLEAWKVFAPKLEGAAVEAGHFVAEEAPGAVLAAVLPFLAG CCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCHHHHCCCCHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA