| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is suhB [H]
Identifier: 154246984
GI number: 154246984
Start: 3394609
End: 3395397
Strand: Reverse
Name: suhB [H]
Synonym: Xaut_3055
Alternate gene names: 154246984
Gene position: 3395397-3394609 (Counterclockwise)
Preceding gene: 154246985
Following gene: 154246982
Centisome position: 63.96
GC content: 68.44
Gene sequence:
>789_bases ATGATCCGCACGCCGCTCATCACCGTCATGGTCCAGGCCGTCCGCAAGGCCGGCCGGGCGCTCGCCCGCGACTTCGGCGA GGTGGAGCAGCTTCAGGTATCCATGAAGGGGCCGGGCGACTTCGTCTCCGCCGCTGACCGCAAGTCGGAGGAGACCCTCC ACGCCGAGTTGCTGCGGGTGCGGCCCACCTACAGCTTCCTCATGGAGGAGAGCGGCGCGGTGGAAGGCGCCGACACCTCC AACGTGTGGGTGGTGGACCCGCTCGACGGCACCACCAACTTCCTGCACGGCATCCCCATCTTCTCCATCTCGCTGGCGCT GGTGCGCAACGGGGTGCCGGTGGCGGGCGTCATCTTCAATCCGGTGATGGACGAGCTTTACGTGGCCGAAGCCGGCCAGG GCGCCTATCTCAACGACCGGCGCCTGCGGGTCGCCGGCCGCAAGAAGCTCGCCGACAGCGTAGTGTGCTGCGGCCTGCCG CACATGGGCCGGGGCGACCACGCCAAGTTCAACCGCGAGCTGGAAAAGGTGCAGGGACAGGTCTCCGGCCTGCGCCGCAC CGGCTCCGCCGCCATCGATCTTGCCTGGGTGGCCTCGGGCCGCTTCGACGCTTTCTGGGAGCGCGATCTCTCGGCGTGGG ACATGGCGGCGGGCATCGTGATGGTGCGCGAGGCGGGCGGCATCGTCACCGACCTGTCGGACGGCGACAAGATGCTCGAC AAGGGCTCCGTCATCGCCGGCAACGAGATCATCCGCTCCGATCTCATGCGCCTGCTGAAGAGCGCCTGA
Upstream 100 bases:
>100_bases CGGCCACGCCGCAGGCGGGCACACGCTCACCCAACCCTTTCCCCGGCCGCAGGCCCCGGCGACACGCGCGCCGGCCGCGG CCCGAATTTCAGGTCTCCTC
Downstream 100 bases:
>100_bases GCCGCACCCTCCCCGAGGTTCTGCCACGTCATGCCCGGCTCCGCGCCGGGCATTGTCGTTTGATGGCCCCCTCAGCGCCG GGCGAACAGCTTCTCCACGT
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIRTPLITVMVQAVRKAGRALARDFGEVEQLQVSMKGPGDFVSAADRKSEETLHAELLRVRPTYSFLMEESGAVEGADTS NVWVVDPLDGTTNFLHGIPIFSISLALVRNGVPVAGVIFNPVMDELYVAEAGQGAYLNDRRLRVAGRKKLADSVVCCGLP HMGRGDHAKFNRELEKVQGQVSGLRRTGSAAIDLAWVASGRFDAFWERDLSAWDMAAGIVMVREAGGIVTDLSDGDKMLD KGSVIAGNEIIRSDLMRLLKSA
Sequences:
>Translated_262_residues MIRTPLITVMVQAVRKAGRALARDFGEVEQLQVSMKGPGDFVSAADRKSEETLHAELLRVRPTYSFLMEESGAVEGADTS NVWVVDPLDGTTNFLHGIPIFSISLALVRNGVPVAGVIFNPVMDELYVAEAGQGAYLNDRRLRVAGRKKLADSVVCCGLP HMGRGDHAKFNRELEKVQGQVSGLRRTGSAAIDLAWVASGRFDAFWERDLSAWDMAAGIVMVREAGGIVTDLSDGDKMLD KGSVIAGNEIIRSDLMRLLKSA >Mature_262_residues MIRTPLITVMVQAVRKAGRALARDFGEVEQLQVSMKGPGDFVSAADRKSEETLHAELLRVRPTYSFLMEESGAVEGADTS NVWVVDPLDGTTNFLHGIPIFSISLALVRNGVPVAGVIFNPVMDELYVAEAGQGAYLNDRRLRVAGRKKLADSVVCCGLP HMGRGDHAKFNRELEKVQGQVSGLRRTGSAAIDLAWVASGRFDAFWERDLSAWDMAAGIVMVREAGGIVTDLSDGDKMLD KGSVIAGNEIIRSDLMRLLKSA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=250, Percent_Identity=32.8, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI221625487, Length=249, Percent_Identity=32.9317269076305, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI7657236, Length=244, Percent_Identity=33.1967213114754, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI221625507, Length=160, Percent_Identity=33.75, Blast_Score=90, Evalue=2e-18, Organism=Escherichia coli, GI1788882, Length=244, Percent_Identity=38.9344262295082, Blast_Score=197, Evalue=9e-52, Organism=Escherichia coli, GI1790659, Length=131, Percent_Identity=29.7709923664122, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193202570, Length=237, Percent_Identity=34.1772151898734, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI193202572, Length=235, Percent_Identity=32.7659574468085, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320493, Length=208, Percent_Identity=36.0576923076923, Blast_Score=138, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6321836, Length=215, Percent_Identity=33.0232558139535, Blast_Score=113, Evalue=2e-26, Organism=Drosophila melanogaster, GI21357329, Length=237, Percent_Identity=35.8649789029536, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24664926, Length=263, Percent_Identity=32.319391634981, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI21357303, Length=236, Percent_Identity=33.8983050847458, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24664922, Length=231, Percent_Identity=34.1991341991342, Blast_Score=127, Evalue=8e-30, Organism=Drosophila melanogaster, GI24664918, Length=268, Percent_Identity=32.8358208955224, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI21357957, Length=257, Percent_Identity=35.0194552529183, Blast_Score=126, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28401; Mature: 28401
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTPLITVMVQAVRKAGRALARDFGEVEQLQVSMKGPGDFVSAADRKSEETLHAELLRV CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHCCCHHHHHHHHHHHH RPTYSFLMEESGAVEGADTSNVWVVDPLDGTTNFLHGIPIFSISLALVRNGVPVAGVIFN CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCEEHHHHH PVMDELYVAEAGQGAYLNDRRLRVAGRKKLADSVVCCGLPHMGRGDHAKFNRELEKVQGQ HHHHHHHHHCCCCCCEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VSGLRRTGSAAIDLAWVASGRFDAFWERDLSAWDMAAGIVMVREAGGIVTDLSDGDKMLD HHHHHHCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHCEEEEECCCCEEEECCCCHHHHH KGSVIAGNEIIRSDLMRLLKSA CCCEEECHHHHHHHHHHHHHCC >Mature Secondary Structure MIRTPLITVMVQAVRKAGRALARDFGEVEQLQVSMKGPGDFVSAADRKSEETLHAELLRV CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHCCCHHHHHHHHHHHH RPTYSFLMEESGAVEGADTSNVWVVDPLDGTTNFLHGIPIFSISLALVRNGVPVAGVIFN CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCEEHHHHH PVMDELYVAEAGQGAYLNDRRLRVAGRKKLADSVVCCGLPHMGRGDHAKFNRELEKVQGQ HHHHHHHHHCCCCCCEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VSGLRRTGSAAIDLAWVASGRFDAFWERDLSAWDMAAGIVMVREAGGIVTDLSDGDKMLD HHHHHHCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHCEEEEECCCCEEEECCCCHHHHH KGSVIAGNEIIRSDLMRLLKSA CCCEEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]