| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246954
Identifier: 154246954
GI number: 154246954
Start: 3359018
End: 3360073
Strand: Reverse
Name: 154246954
Synonym: Xaut_3025
Alternate gene names: NA
Gene position: 3360073-3359018 (Counterclockwise)
Preceding gene: 154246955
Following gene: 154246953
Centisome position: 63.29
GC content: 68.09
Gene sequence:
>1056_bases ATGACACGTCTCGACGCTTCCGATCTGGCGCAGCGTCTCGGCCGGGAGGCCGAGGCGGTGTGCCGCCACTATCTCGACGC CGGCCATCGTCAGGGCAATTACTGGCAGGTCGGCGATGCGCGCAACACGCCCGGCCGCTCGATGTTCGTCCGGCTCAAGG AGACGGCGAAAGGGCCGGCGGGCAAATGGACCGACGCCGCCACCGGCGAGCATGGCGATCTGCTCGACGTGATCCGGGAG AGCTGCGGCCTCACCGACTTCGCCGATGTCGTCGAGGAAGCCCGCAGCTTTCTCAGCCTGCCGCGTCCGAAACCCGCGCC GGCGAGCCCGAAGCGACCGAGCACGCCGGCCCCGTCAGGCTCGGCCGAGGCGGCAAGGCGGCTGTTCGCTATGTCGAAGC CGATCGGCGGCACGCTGGTAGAAGCGTATCTCCGCAATCGCGGCATTACGGCTTTGCACGGAACCGGAAGCCTCCGCTTC CATCCGCGCTGCTATTATCGACCGGACGATCATGGCCCGACCGAAACCTGGCCAGCGATGATCGCCGCCGTCACCGATCT TCGGGGCACGATCACCGGCGCACATCGCACCTGGCTTGCCCCTGACGGCCCAGATCCTATCCGGGTTGGCAAGGCGCCGA TCGACACGCCGCGCAAAGCGATGGGCGACCTGCTCGGACACGCCGTCCGCTTCGGGAACGCCGGCGCGGTGATGGCGGCG GGCGAAGGCATCGAAACCATCCTGTCCGCACGTCAGGCGCTTCCGCACATGGCGATGGCGGCCGCCCTGTCCGCTGCCCA TCTGGCCGCCATCCTGTTCCCCGACGATCTGCGCCGGCTCTATATCGTCCGCGACAACGACCCGGCAGGTGACGGCGCAC GCGACAGCCTTGTCGAACGGGCGAACGCGGCCGGGATCGAGGTGATCGTGCTCTCGCCGGTGCTCGAGGATTTCAACGAG GATCTCCGGCGCCTCGGCCTCGATGCGTTCCGGGCCAATCTCAGGGTGCAGCTCGCACCGCAGGACATCGCCCGCTTCTG GCTCCAAGCCGCATAG
Upstream 100 bases:
>100_bases TCAGGATGTTCGTGCCGACCGATAGCGCCGGTCTTGCGGTGCTGGAGCGAGTGCTGGGCCGCTATCCGGTCCAGCGCATC GGCGAACGCGAGGCGGCGTG
Downstream 100 bases:
>100_bases TCGCCGGCATGGGGATGGCGGGGCCACCGTCATCATGCCCGCAGGATGCGTCCTTCCATCGGAGAGGACCGCGCCTCGGC CTTCGAGAGGGCGATCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTRLDASDLAQRLGREAEAVCRHYLDAGHRQGNYWQVGDARNTPGRSMFVRLKETAKGPAGKWTDAATGEHGDLLDVIRE SCGLTDFADVVEEARSFLSLPRPKPAPASPKRPSTPAPSGSAEAARRLFAMSKPIGGTLVEAYLRNRGITALHGTGSLRF HPRCYYRPDDHGPTETWPAMIAAVTDLRGTITGAHRTWLAPDGPDPIRVGKAPIDTPRKAMGDLLGHAVRFGNAGAVMAA GEGIETILSARQALPHMAMAAALSAAHLAAILFPDDLRRLYIVRDNDPAGDGARDSLVERANAAGIEVIVLSPVLEDFNE DLRRLGLDAFRANLRVQLAPQDIARFWLQAA
Sequences:
>Translated_351_residues MTRLDASDLAQRLGREAEAVCRHYLDAGHRQGNYWQVGDARNTPGRSMFVRLKETAKGPAGKWTDAATGEHGDLLDVIRE SCGLTDFADVVEEARSFLSLPRPKPAPASPKRPSTPAPSGSAEAARRLFAMSKPIGGTLVEAYLRNRGITALHGTGSLRF HPRCYYRPDDHGPTETWPAMIAAVTDLRGTITGAHRTWLAPDGPDPIRVGKAPIDTPRKAMGDLLGHAVRFGNAGAVMAA GEGIETILSARQALPHMAMAAALSAAHLAAILFPDDLRRLYIVRDNDPAGDGARDSLVERANAAGIEVIVLSPVLEDFNE DLRRLGLDAFRANLRVQLAPQDIARFWLQAA >Mature_350_residues TRLDASDLAQRLGREAEAVCRHYLDAGHRQGNYWQVGDARNTPGRSMFVRLKETAKGPAGKWTDAATGEHGDLLDVIRES CGLTDFADVVEEARSFLSLPRPKPAPASPKRPSTPAPSGSAEAARRLFAMSKPIGGTLVEAYLRNRGITALHGTGSLRFH PRCYYRPDDHGPTETWPAMIAAVTDLRGTITGAHRTWLAPDGPDPIRVGKAPIDTPRKAMGDLLGHAVRFGNAGAVMAAG EGIETILSARQALPHMAMAAALSAAHLAAILFPDDLRRLYIVRDNDPAGDGARDSLVERANAAGIEVIVLSPVLEDFNED LRRLGLDAFRANLRVQLAPQDIARFWLQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37881; Mature: 37750
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLDASDLAQRLGREAEAVCRHYLDAGHRQGNYWQVGDARNTPGRSMFVRLKETAKGPA CCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHEEEEEHHHCCCCC GKWTDAATGEHGDLLDVIRESCGLTDFADVVEEARSFLSLPRPKPAPASPKRPSTPAPSG CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SAEAARRLFAMSKPIGGTLVEAYLRNRGITALHGTGSLRFHPRCYYRPDDHGPTETWPAM HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCEEECCEEECCCCCCCCCHHHHHH IAAVTDLRGTITGAHRTWLAPDGPDPIRVGKAPIDTPRKAMGDLLGHAVRFGNAGAVMAA HHHHHHHHHHEECCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC GEGIETILSARQALPHMAMAAALSAAHLAAILFPDDLRRLYIVRDNDPAGDGARDSLVER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH ANAAGIEVIVLSPVLEDFNEDLRRLGLDAFRANLRVQLAPQDIARFWLQAA HCCCCEEEEEECHHHHHHHHHHHHHCHHHHHCCCEEEECHHHHHHHHHHCC >Mature Secondary Structure TRLDASDLAQRLGREAEAVCRHYLDAGHRQGNYWQVGDARNTPGRSMFVRLKETAKGPA CCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHEEEEEHHHCCCCC GKWTDAATGEHGDLLDVIRESCGLTDFADVVEEARSFLSLPRPKPAPASPKRPSTPAPSG CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SAEAARRLFAMSKPIGGTLVEAYLRNRGITALHGTGSLRFHPRCYYRPDDHGPTETWPAM HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCEEECCEEECCCCCCCCCHHHHHH IAAVTDLRGTITGAHRTWLAPDGPDPIRVGKAPIDTPRKAMGDLLGHAVRFGNAGAVMAA HHHHHHHHHHEECCCEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC GEGIETILSARQALPHMAMAAALSAAHLAAILFPDDLRRLYIVRDNDPAGDGARDSLVER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH ANAAGIEVIVLSPVLEDFNEDLRRLGLDAFRANLRVQLAPQDIARFWLQAA HCCCCEEEEEECHHHHHHHHHHHHHCHHHHHCCCEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA