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The map label for this gene is 154246940

Identifier: 154246940

GI number: 154246940

Start: 3350628

End: 3351173

Strand: Reverse

Name: 154246940

Synonym: Xaut_3011

Alternate gene names: NA

Gene position: 3351173-3350628 (Counterclockwise)

Preceding gene: 154246941

Following gene: 154246939

Centisome position: 63.12

GC content: 67.95

Gene sequence:

>546_bases
GTGACTCGCTTCGGCTATGTCATGGTGACGTATTTCGTGACGATGGGCGTCGCCGTCGCCGCTTTCATCCCGATCGCGCC
GCGCCTCGTCTGGAATGCCTCGGCCAGCGTGCCGGTCGGTCTCTACGACCTTGGCCCGACGCGCCATTTGGAAGTCGGCG
ATCTCGTCGCGGCCATGCCAGACAAGCCACTGTCCGACTTCATGGTCGCTCGCGGCTATATCGGCCGCGACGTGCCGCTG
ATGAAGCGCGTCATGGGGCTTCCCGGTCAACGGGTCTGCCGCACCGGCAACACCATCACCGTCGATGCCGTGCCGCTCGG
CGAGGCGCTCGACCGCGACCGACTCGGCCGCCCATTGCCCGTCTGGCAAGGCTGCCGCCGCATCGCGGATGGCGACATCT
TCCTCATGAATCCCGACGCGCACGACAGTCTGGACGGTCGCTACTTCGGCCCGCTTCCGACGCGCGCGGTCATCGGCAAG
GCGACGCCGCTCTACACCGACGAGGCCGGCGACGGCCGCTTCGTCTGGCGCGCGACGGCACGCTGA

Upstream 100 bases:

>100_bases
ATTGGCGGCATGTCGGCAACCGGATCGGCGCCGGGCACCAGCCCCGCGCCTATTCGACGGAGCGCCATCAGGCGTGGCTC
AAGCGCCGGGAGATCGAACT

Downstream 100 bases:

>100_bases
CCGCTTCCCGTCGTCGGGAGCGGCGCCCGCCGACGGTTCAACCACACCGCCGCCATGGAGACCATCATGTCACAGATCGG
CACATTCACCCGTGAGACAT

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Type IV Secretory Pathway Protease TraF-Like Protein; Peptidase; Plasmid Transfer Protein TraF; Type IV Secretory Pathway Protease TraF; Conjugative Transfer Signal Peptidase TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTRFGYVMVTYFVTMGVAVAAFIPIAPRLVWNASASVPVGLYDLGPTRHLEVGDLVAAMPDKPLSDFMVARGYIGRDVPL
MKRVMGLPGQRVCRTGNTITVDAVPLGEALDRDRLGRPLPVWQGCRRIADGDIFLMNPDAHDSLDGRYFGPLPTRAVIGK
ATPLYTDEAGDGRFVWRATAR

Sequences:

>Translated_181_residues
MTRFGYVMVTYFVTMGVAVAAFIPIAPRLVWNASASVPVGLYDLGPTRHLEVGDLVAAMPDKPLSDFMVARGYIGRDVPL
MKRVMGLPGQRVCRTGNTITVDAVPLGEALDRDRLGRPLPVWQGCRRIADGDIFLMNPDAHDSLDGRYFGPLPTRAVIGK
ATPLYTDEAGDGRFVWRATAR
>Mature_180_residues
TRFGYVMVTYFVTMGVAVAAFIPIAPRLVWNASASVPVGLYDLGPTRHLEVGDLVAAMPDKPLSDFMVARGYIGRDVPLM
KRVMGLPGQRVCRTGNTITVDAVPLGEALDRDRLGRPLPVWQGCRRIADGDIFLMNPDAHDSLDGRYFGPLPTRAVIGKA
TPLYTDEAGDGRFVWRATAR

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19791; Mature: 19660

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFGYVMVTYFVTMGVAVAAFIPIAPRLVWNASASVPVGLYDLGPTRHLEVGDLVAAMP
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEHHHHHHHCC
DKPLSDFMVARGYIGRDVPLMKRVMGLPGQRVCRTGNTITVDAVPLGEALDRDRLGRPLP
CCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEEEECCCHHHCHHHCCCCCC
VWQGCRRIADGDIFLMNPDAHDSLDGRYFGPLPTRAVIGKATPLYTDEAGDGRFVWRATA
HHHHHHHHCCCCEEEECCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEC
R
C
>Mature Secondary Structure 
TRFGYVMVTYFVTMGVAVAAFIPIAPRLVWNASASVPVGLYDLGPTRHLEVGDLVAAMP
CCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEHHHHHHHCC
DKPLSDFMVARGYIGRDVPLMKRVMGLPGQRVCRTGNTITVDAVPLGEALDRDRLGRPLP
CCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEEEECCCHHHCHHHCCCCCC
VWQGCRRIADGDIFLMNPDAHDSLDGRYFGPLPTRAVIGKATPLYTDEAGDGRFVWRATA
HHHHHHHHCCCCEEEECCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA