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The map label for this gene is traG [H]

Identifier: 154246935

GI number: 154246935

Start: 3343381

End: 3345372

Strand: Reverse

Name: traG [H]

Synonym: Xaut_3006

Alternate gene names: 154246935

Gene position: 3345372-3343381 (Counterclockwise)

Preceding gene: 154246936

Following gene: 154246934

Centisome position: 63.01

GC content: 64.31

Gene sequence:

>1992_bases
ATGTCTGGAAGCCGTGTCCTTTGGGGACAAGTCGCAATCGTCCTCGCCATCGTGCTCACCGCGATATGGTGCGCAACGGA
ATGGACGGCATGGCGTCTCGGGTTTCAGGCGCAGCTCGGACAGCCGTGGTTCGTGGTAGCGGGTTGGCCGGTCTATTACC
CGCCGATCTTCTTCTGGTGGTGGTTCTCGTTCGACGCCTATGCGCCGTCGATTTTCCTCGAAGGCGCCATGATCGCGGTA
TCGGGCGGCTTGGTCTCGATCGTCGTCGCCATCACCCTGTCTGTGATCCGAGCGCGGGACGCGAAGAACGTCGTCACCTA
TGGCTCGGCGCGCTGGGCCGAGCTGAACGAGATCAAGGCAGCCGGATTGCTCGGCGCGGACGGCGTGGTGCTTGGTCGCT
ATGACCGCGACTATCTCCGCCACGATGGCCCGGAGCATGTGCTGTGCTTCGCGCCGACCAGATCGGGCAAGGGCGTCGGT
CTCGTCGTACCGACCCTGCTGACCTGGCCCGGCAGCACGATCATCCATGACATCAAGGGGGAGAATTGGGGGCTGACCGC
CGGCTTCCGCTCTCGGCACGGCCGCGTGCTGCTGTTCGATCCGACCAATCCCACCTCGTCGGCCTATAATCCGCTGCTCG
AGGTGCGGCGCGGCGACAAAGAAGTCCGCGACGTGCAGAACATCGCCGATATCCTCGTCGATCCCGAAGGTGCTTTGGAC
AAAAGGAACCATTGGGAAAAGACCAGCCATTCGCTTCTGGTCGGCGCGATCCTGCATGTTCTCTACGCGGAAGCCGACAA
GACGCTGGCGGGCGTCGCCAATTTCCTGTCCGATCCGAAGCGACCCGTCGAGGCGACGTTGCGCGCCATGATGAATACCC
CGCATCTCGGCGAGGCCGGCGTGCATCCCGTCATCGCGTCGTCGGCGCGCGAGCTGCTGAACAAGAGCGACAACGAACGA
TCGGGCGTGCTGTCGACCGCCATGTCGTTCCTCGGCCTCTATCGTGATCCCGTGGTGGCGAAAGTGACGGCGCGCTGCGA
CTGGCGCATCGCCGATCTCGTCTCGGGCGACAGGCCCGTCAGCCTCTACCTCGTGGTGCCGCCGTCGGACATCAACCGCA
CCAAACCGCTGATCCGCCTGCTGCTCAATCAGGTCGGGCGGCGCTTGACCGAAGACCTGACGACCTCGGCCAATCGCCAC
CGGCTGCTGTTGATGCTCGACGAGTTTCCGGCGCTGGGAAGGTTGGATTTCTTCGAGTCCGCGCTGGCTTTCATGGCGGG
CTACGGGATCAAGAGCTTTTTGATCGCGCAGAGCCTCAACCAGATCGAAAAGGCGTATGGCGCCAACAACAGCGTGCTCG
ACAACTGCCATGTCCGCGTCGCCTTCGCCACCAACGACGAGCGCACAGCCAAGCGCGTGTCGGACGCATTGGGCACCGCG
ACCGAGATGCGCGATTCCACCAACTATGCCGGCCACCGGCTTTCGCCCTGGCTGGGGCATCTCATGGTGTCGCGGCAGGA
GACGGCCAGGCCGTTGCTTACTCCCGGCGAGGTCATGCAGCTTCCACCCGCCGATGAATTGCTGCTGGTCGCGGGCGTCC
CGCCGGTGCGCGCGAAGAAGGCCCGCTACTACGAGGATGCGCGGTTCCGTGAGCGGATCATGCCGCCGCCGAAATCCGCA
GCCACAAAAGGCTCGGCCAAGCCGCCCACCGATGATTGGTCCGCACTGGCGATCCCGACCGCATCGGCCGGCGTAACGGC
CAATACCGAAACCGGCCCGATCACCGATCCGGCCAATGCAGGTATCCGCCGCGAGCCGGAATTGCCGGAGCATGAAGAGA
TCGCACCCCCCGAGCGTCCGGCAATTGGAGAGTTCGCCCTGCTCGACGACGAGCCGGACACGGACGCCGCCAAGGCCCGC
AGCCTTCGTCGTCAGGTCACATCTATCGCCCGGCAGGCGACAATGGACCCGGCCGATGGCATCGAGTTGTAG

Upstream 100 bases:

>100_bases
GCCACAGCATCCGAAATCTCGACGCTTCGGATTTTCTGTTGCTTCTCGCCATAACGGATATTCTTTGATCGGCTCCACTC
TTTTGCCGGTCGGAGCCTCT

Downstream 100 bases:

>100_bases
CAGGGCCAACCATGCAGACCAAAACCCGCATGAACGTCTATTTCGAGCCGGAATTGTTGAGGAAGGTCGAGGCGCTGGCG
CTCCGGCGCCGCGTCTCGAA

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 663; Mature: 662

Protein sequence:

>663_residues
MSGSRVLWGQVAIVLAIVLTAIWCATEWTAWRLGFQAQLGQPWFVVAGWPVYYPPIFFWWWFSFDAYAPSIFLEGAMIAV
SGGLVSIVVAITLSVIRARDAKNVVTYGSARWAELNEIKAAGLLGADGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSTIIHDIKGENWGLTAGFRSRHGRVLLFDPTNPTSSAYNPLLEVRRGDKEVRDVQNIADILVDPEGALD
KRNHWEKTSHSLLVGAILHVLYAEADKTLAGVANFLSDPKRPVEATLRAMMNTPHLGEAGVHPVIASSARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVSGDRPVSLYLVVPPSDINRTKPLIRLLLNQVGRRLTEDLTTSANRH
RLLLMLDEFPALGRLDFFESALAFMAGYGIKSFLIAQSLNQIEKAYGANNSVLDNCHVRVAFATNDERTAKRVSDALGTA
TEMRDSTNYAGHRLSPWLGHLMVSRQETARPLLTPGEVMQLPPADELLLVAGVPPVRAKKARYYEDARFRERIMPPPKSA
ATKGSAKPPTDDWSALAIPTASAGVTANTETGPITDPANAGIRREPELPEHEEIAPPERPAIGEFALLDDEPDTDAAKAR
SLRRQVTSIARQATMDPADGIEL

Sequences:

>Translated_663_residues
MSGSRVLWGQVAIVLAIVLTAIWCATEWTAWRLGFQAQLGQPWFVVAGWPVYYPPIFFWWWFSFDAYAPSIFLEGAMIAV
SGGLVSIVVAITLSVIRARDAKNVVTYGSARWAELNEIKAAGLLGADGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVG
LVVPTLLTWPGSTIIHDIKGENWGLTAGFRSRHGRVLLFDPTNPTSSAYNPLLEVRRGDKEVRDVQNIADILVDPEGALD
KRNHWEKTSHSLLVGAILHVLYAEADKTLAGVANFLSDPKRPVEATLRAMMNTPHLGEAGVHPVIASSARELLNKSDNER
SGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVSGDRPVSLYLVVPPSDINRTKPLIRLLLNQVGRRLTEDLTTSANRH
RLLLMLDEFPALGRLDFFESALAFMAGYGIKSFLIAQSLNQIEKAYGANNSVLDNCHVRVAFATNDERTAKRVSDALGTA
TEMRDSTNYAGHRLSPWLGHLMVSRQETARPLLTPGEVMQLPPADELLLVAGVPPVRAKKARYYEDARFRERIMPPPKSA
ATKGSAKPPTDDWSALAIPTASAGVTANTETGPITDPANAGIRREPELPEHEEIAPPERPAIGEFALLDDEPDTDAAKAR
SLRRQVTSIARQATMDPADGIEL
>Mature_662_residues
SGSRVLWGQVAIVLAIVLTAIWCATEWTAWRLGFQAQLGQPWFVVAGWPVYYPPIFFWWWFSFDAYAPSIFLEGAMIAVS
GGLVSIVVAITLSVIRARDAKNVVTYGSARWAELNEIKAAGLLGADGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVGL
VVPTLLTWPGSTIIHDIKGENWGLTAGFRSRHGRVLLFDPTNPTSSAYNPLLEVRRGDKEVRDVQNIADILVDPEGALDK
RNHWEKTSHSLLVGAILHVLYAEADKTLAGVANFLSDPKRPVEATLRAMMNTPHLGEAGVHPVIASSARELLNKSDNERS
GVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVSGDRPVSLYLVVPPSDINRTKPLIRLLLNQVGRRLTEDLTTSANRHR
LLLMLDEFPALGRLDFFESALAFMAGYGIKSFLIAQSLNQIEKAYGANNSVLDNCHVRVAFATNDERTAKRVSDALGTAT
EMRDSTNYAGHRLSPWLGHLMVSRQETARPLLTPGEVMQLPPADELLLVAGVPPVRAKKARYYEDARFRERIMPPPKSAA
TKGSAKPPTDDWSALAIPTASAGVTANTETGPITDPANAGIRREPELPEHEEIAPPERPAIGEFALLDDEPDTDAAKARS
LRRQVTSIARQATMDPADGIEL

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 72644; Mature: 72513

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSRVLWGQVAIVLAIVLTAIWCATEWTAWRLGFQAQLGQPWFVVAGWPVYYPPIFFWW
CCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHCCCCCEEEEECCCCHHCHHHHHH
WFSFDAYAPSIFLEGAMIAVSGGLVSIVVAITLSVIRARDAKNVVTYGSARWAELNEIKA
HHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
AGLLGADGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSTIIHDIKG
HCCCCCCCEEEECCCHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHCCCCCEEEECCC
ENWGLTAGFRSRHGRVLLFDPTNPTSSAYNPLLEVRRGDKEVRDVQNIADILVDPEGALD
CCCCEECCHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
KRNHWEKTSHSLLVGAILHVLYAEADKTLAGVANFLSDPKRPVEATLRAMMNTPHLGEAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
VHPVIASSARELLNKSDNERSGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVSGDRPV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHCCCCCE
SLYLVVPPSDINRTKPLIRLLLNQVGRRLTEDLTTSANRHRLLLMLDEFPALGRLDFFES
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
ALAFMAGYGIKSFLIAQSLNQIEKAYGANNSVLDNCHVRVAFATNDERTAKRVSDALGTA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHH
TEMRDSTNYAGHRLSPWLGHLMVSRQETARPLLTPGEVMQLPPADELLLVAGVPPVRAKK
HHHHCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCEEECCCCCCEEEEECCCCCHHHH
ARYYEDARFRERIMPPPKSAATKGSAKPPTDDWSALAIPTASAGVTANTETGPITDPANA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
GIRREPELPEHEEIAPPERPAIGEFALLDDEPDTDAAKARSLRRQVTSIARQATMDPADG
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
IEL
CCC
>Mature Secondary Structure 
SGSRVLWGQVAIVLAIVLTAIWCATEWTAWRLGFQAQLGQPWFVVAGWPVYYPPIFFWW
CCCEEHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHCCCCCEEEEECCCCHHCHHHHHH
WFSFDAYAPSIFLEGAMIAVSGGLVSIVVAITLSVIRARDAKNVVTYGSARWAELNEIKA
HHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
AGLLGADGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSTIIHDIKG
HCCCCCCCEEEECCCHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHCCCCCEEEECCC
ENWGLTAGFRSRHGRVLLFDPTNPTSSAYNPLLEVRRGDKEVRDVQNIADILVDPEGALD
CCCCEECCHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
KRNHWEKTSHSLLVGAILHVLYAEADKTLAGVANFLSDPKRPVEATLRAMMNTPHLGEAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
VHPVIASSARELLNKSDNERSGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVSGDRPV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHCCCCCE
SLYLVVPPSDINRTKPLIRLLLNQVGRRLTEDLTTSANRHRLLLMLDEFPALGRLDFFES
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
ALAFMAGYGIKSFLIAQSLNQIEKAYGANNSVLDNCHVRVAFATNDERTAKRVSDALGTA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHH
TEMRDSTNYAGHRLSPWLGHLMVSRQETARPLLTPGEVMQLPPADELLLVAGVPPVRAKK
HHHHCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCEEECCCCCCEEEEECCCCCHHHH
ARYYEDARFRERIMPPPKSAATKGSAKPPTDDWSALAIPTASAGVTANTETGPITDPANA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
GIRREPELPEHEEIAPPERPAIGEFALLDDEPDTDAAKARSLRRQVTSIARQATMDPADG
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
IEL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]