| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246921
Identifier: 154246921
GI number: 154246921
Start: 3325846
End: 3328647
Strand: Direct
Name: 154246921
Synonym: Xaut_2991
Alternate gene names: NA
Gene position: 3325846-3328647 (Clockwise)
Preceding gene: 154246920
Following gene: 154246922
Centisome position: 62.65
GC content: 58.85
Gene sequence:
>2802_bases ATGACCTCGACGACTAACCCCAAGAAGAAACTGATCGAGGTTGCGATCCCGCTCGAAGCGATCAACGCCGCCTCCGCACG CGAGAAGTCGATCCGGCATGGGCATCCGTCCACGCTTCATCTGTGGTGGGCACGGCGGCCGCTGGCGGCCTGCCGCGCGG TTCTGTTCGCCCAGCTTGTCGATGATCCGTCGAGCGACCTCGACAAATTCCCCACGCACGAAGCTCAAGAGGCTGAGCGC AAGCGCCTGTTCGGCATCATTGAAGAACTGGTGAAGTGGGAGAACTCGACCAACGAGGAGGTGCTGGAGCGCGCCCGCGC CGAAATCCGCAAGAGCTGCGGCGGCGAGCTACCGCCGGTCTATGATCCGTTCTCGGGCGGCGGGTCGATCCCGCTAGAGG CGCAACGTCTCGGCCTGCCCGCCTATGGGTCAGACCTGAACCCGGTCGCGGTGATGATCGGCAAGGCGATGATCGAGATT CCGCCGAAGTTCAAGGACAAGGAGCCGATCCATCCCGGCGCGAAGGACCGGCAGTTCTATCGCAATGCCGAGGGGCTCGC AGAGGACGTCAAGTGCTATGGCGAATGGGTGCGTGAAAAGGCGTGGGAGCGCATCGGGCATTTCTACCCGCAGGTGGACC TGCCGAAAGAGCACGGCGGCGGCAAAGGGACGGTGATCGCTTGGATTTGGGCACGAACGGTGCCCAGCCCTGATCCTGCC TTCTCCAACGTGGAGGTCCCGATCGCGTCGAGCTTCCTACTCAGCGCTAAGGCTGGGAAGGAAACGTGGGTAGAGCCGAT TGTCGACAAACAGGCGAAGACCATCTCCTATCGCATCAGGCATGGCGGTACAAAAGCCGAACTCGCTGCTGCAAAGGAAG GAACCAAAGCAGGTCGCGGTGCGAATTTCCGCTGCCTTATGTCGGATACGGCGATCACTCCTGACTATGTGAAAAGTAAT GGTCGCGCTGGCAACATGGGTCAGACGCTGATCGCGATCGTTGCGGAAGGCAATCGTGGCCGGGCGTATGTCACACCTGC CGAAGCGCACGAGAATCTGGCCTTTTCGGCAAAACCCGACTGGAAACCGGAAACCAGCCTGCCGAACGACCCACGGAATT TCTGGACTGTGGACTACGGTTTGACGACCTTCGGTGATTTGTTCACCGACCGGCAATTGGTAGCGCTGAATACCTTCAGC GATCTGGTCCAAGCGGCGCGAACGCAGATCGAAGCCGACGCATTGGTCGCCGGGCTATCTTCTGATCCGACCCCGCTGCG CGATGGTGGCATAGGCGCCAAAGCCTACGCCGAAGCTGTCAGCGTGTATTTGTCCTTTGCGATTGACCGGCTTGCGGATG CTGGCAGTTCGATCGCCACATGGTCGTCATCAGAGTTCATCCGTTTCACGTTTGCTCGGCAGGCTATCCCGATGACTTGG GATTTCGCTGAATGCAATGTCTTCAGCGATAGTACCGGAAACTATCTCGGTGCCGTCGATTGGGTCTGGAAGGCTCTCTC TGGGCTAGTTCCAAACGCGGCTGGCACTGAGATTCAGCACGACGCGCAGAATGTACGTTTGCCGAGTGGAGCGGTCGTCT CGACTGACCCGCCATACTACGACAATATCGGCTACGCGGATCTGTCGGATTACTTCTATGTTTGGCTTAGGCGTAACATT AAGGATGTTTATCCTGATCTCGGGAGCACCATTTCAGTTCCTAAAGAAGAGGAACTGGTCGCGACGCCTTATCGACACGG CGGGAAAGCGAATGCTGAGGAGCATTTCCTGACGGGTATGACGGCGGCTATATCCAGCCTTGCCCGTCAATCGTCTTCAT TGTTCCCTGCGACAATCTACTATGCCTTTAAGCAAAGCGAGGTCGAGCAAGACGGACTGAGTTCGACTGGGTGGGCAACC TTCCTACAGGCTGTGATTGAAGCGGGTTACGCTATTGTTGGAACTTGGCCCGTTCGCACGGAGCGCTCAGCTCGGACAAT TGCTACTGGCACCAATGCTCTCGCGAATTCGGTCGTCTTGGTGTGCCGGAAAAAGGAGAGTACGGCCGAGGTCGTCACCC GTGCCGAATTCATCCGTGCTCTGAAACGTGAATTGCCGCCGGCGATCTCAGAGCTTCAGGCGGCCACCATCGCACCAGCG GATATGCCACAATCAGCCATCGGTCCGGGCATGGGCGTATTTTCGCGTTACAAGGCCGTGCTGGAGTCGGACGACAATCC GATGAGCGTGAAAGCCGCGCTCCAACTCATCAACAAGGAACTCGACGAATATCTGGGCGGTATCCAGGGTGAGTTCGACG CGGACACCCGGTTCGCCATCACCTGGTTCGAGCAGCACGGAAACGGCAAGGGGGACTATGGTGTCGCCGACAACCTTGCC CGTGCGCGCGGTATCGCGGTCGAAAGCGTCAAGCATGCCGGGATCGTCGACAGCGCCGCTGGCAAGGTCCGCATCCTCGC GCGTGACGAACTCGACGAGGATTGGGACCCGGAAGAGGACCGACACTTGACGGTGTGGGAGTGCCTCCAGCATCTGGTCC GTCTGCACGAGAAGGACGGTATCTCCCACGACACCGCCGTGCTTTTGAAGAAGATCATCACCCAGGCCGAGGCGGTAAAA GATCTCGCCTACTGCCTCTACGACATCAGCGCCAACAAGCGGAAGGATGCGAAAGAGGCCACGGCCTATAACGCCCTGAT CGCCGATTGGACCGAGCTGACGAAGGCTGCGGCGGCCATCCACGACACAAGCGGCGATCGTCAGATCCGGCTGGATATTT AA
Upstream 100 bases:
>100_bases AACCCGGAAGGTGGTCCCGTCGAAATGACGGGCGCCCGCCTGCGCGCTCTACGCGACGGCGGCGAACTGACCATCCATCC CGCAACGTACAGGCTTGTTT
Downstream 100 bases:
>100_bases GGGGAACGGAACGTGGCAAAAAGCACGCGCCAATATGTGTTTGAGGGAATGGAACTGCTGCCTGCGGCGCTGATCCCCTT CGTCGAGAAGCGTCTCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Methylase; DNA Methylase Containing A Zn-Ribbon Module; Cytoplasmic Protein; Low Quality Protein; Adenine-Specific DNA Methylase Containing A Zn-Ribbon
Number of amino acids: Translated: 933; Mature: 932
Protein sequence:
>933_residues MTSTTNPKKKLIEVAIPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDPSSDLDKFPTHEAQEAER KRLFGIIEELVKWENSTNEEVLERARAEIRKSCGGELPPVYDPFSGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKAMIEI PPKFKDKEPIHPGAKDRQFYRNAEGLAEDVKCYGEWVREKAWERIGHFYPQVDLPKEHGGGKGTVIAWIWARTVPSPDPA FSNVEVPIASSFLLSAKAGKETWVEPIVDKQAKTISYRIRHGGTKAELAAAKEGTKAGRGANFRCLMSDTAITPDYVKSN GRAGNMGQTLIAIVAEGNRGRAYVTPAEAHENLAFSAKPDWKPETSLPNDPRNFWTVDYGLTTFGDLFTDRQLVALNTFS DLVQAARTQIEADALVAGLSSDPTPLRDGGIGAKAYAEAVSVYLSFAIDRLADAGSSIATWSSSEFIRFTFARQAIPMTW DFAECNVFSDSTGNYLGAVDWVWKALSGLVPNAAGTEIQHDAQNVRLPSGAVVSTDPPYYDNIGYADLSDYFYVWLRRNI KDVYPDLGSTISVPKEEELVATPYRHGGKANAEEHFLTGMTAAISSLARQSSSLFPATIYYAFKQSEVEQDGLSSTGWAT FLQAVIEAGYAIVGTWPVRTERSARTIATGTNALANSVVLVCRKKESTAEVVTRAEFIRALKRELPPAISELQAATIAPA DMPQSAIGPGMGVFSRYKAVLESDDNPMSVKAALQLINKELDEYLGGIQGEFDADTRFAITWFEQHGNGKGDYGVADNLA RARGIAVESVKHAGIVDSAAGKVRILARDELDEDWDPEEDRHLTVWECLQHLVRLHEKDGISHDTAVLLKKIITQAEAVK DLAYCLYDISANKRKDAKEATAYNALIADWTELTKAAAAIHDTSGDRQIRLDI
Sequences:
>Translated_933_residues MTSTTNPKKKLIEVAIPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDPSSDLDKFPTHEAQEAER KRLFGIIEELVKWENSTNEEVLERARAEIRKSCGGELPPVYDPFSGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKAMIEI PPKFKDKEPIHPGAKDRQFYRNAEGLAEDVKCYGEWVREKAWERIGHFYPQVDLPKEHGGGKGTVIAWIWARTVPSPDPA FSNVEVPIASSFLLSAKAGKETWVEPIVDKQAKTISYRIRHGGTKAELAAAKEGTKAGRGANFRCLMSDTAITPDYVKSN GRAGNMGQTLIAIVAEGNRGRAYVTPAEAHENLAFSAKPDWKPETSLPNDPRNFWTVDYGLTTFGDLFTDRQLVALNTFS DLVQAARTQIEADALVAGLSSDPTPLRDGGIGAKAYAEAVSVYLSFAIDRLADAGSSIATWSSSEFIRFTFARQAIPMTW DFAECNVFSDSTGNYLGAVDWVWKALSGLVPNAAGTEIQHDAQNVRLPSGAVVSTDPPYYDNIGYADLSDYFYVWLRRNI KDVYPDLGSTISVPKEEELVATPYRHGGKANAEEHFLTGMTAAISSLARQSSSLFPATIYYAFKQSEVEQDGLSSTGWAT FLQAVIEAGYAIVGTWPVRTERSARTIATGTNALANSVVLVCRKKESTAEVVTRAEFIRALKRELPPAISELQAATIAPA DMPQSAIGPGMGVFSRYKAVLESDDNPMSVKAALQLINKELDEYLGGIQGEFDADTRFAITWFEQHGNGKGDYGVADNLA RARGIAVESVKHAGIVDSAAGKVRILARDELDEDWDPEEDRHLTVWECLQHLVRLHEKDGISHDTAVLLKKIITQAEAVK DLAYCLYDISANKRKDAKEATAYNALIADWTELTKAAAAIHDTSGDRQIRLDI >Mature_932_residues TSTTNPKKKLIEVAIPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDPSSDLDKFPTHEAQEAERK RLFGIIEELVKWENSTNEEVLERARAEIRKSCGGELPPVYDPFSGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKAMIEIP PKFKDKEPIHPGAKDRQFYRNAEGLAEDVKCYGEWVREKAWERIGHFYPQVDLPKEHGGGKGTVIAWIWARTVPSPDPAF SNVEVPIASSFLLSAKAGKETWVEPIVDKQAKTISYRIRHGGTKAELAAAKEGTKAGRGANFRCLMSDTAITPDYVKSNG RAGNMGQTLIAIVAEGNRGRAYVTPAEAHENLAFSAKPDWKPETSLPNDPRNFWTVDYGLTTFGDLFTDRQLVALNTFSD LVQAARTQIEADALVAGLSSDPTPLRDGGIGAKAYAEAVSVYLSFAIDRLADAGSSIATWSSSEFIRFTFARQAIPMTWD FAECNVFSDSTGNYLGAVDWVWKALSGLVPNAAGTEIQHDAQNVRLPSGAVVSTDPPYYDNIGYADLSDYFYVWLRRNIK DVYPDLGSTISVPKEEELVATPYRHGGKANAEEHFLTGMTAAISSLARQSSSLFPATIYYAFKQSEVEQDGLSSTGWATF LQAVIEAGYAIVGTWPVRTERSARTIATGTNALANSVVLVCRKKESTAEVVTRAEFIRALKRELPPAISELQAATIAPAD MPQSAIGPGMGVFSRYKAVLESDDNPMSVKAALQLINKELDEYLGGIQGEFDADTRFAITWFEQHGNGKGDYGVADNLAR ARGIAVESVKHAGIVDSAAGKVRILARDELDEDWDPEEDRHLTVWECLQHLVRLHEKDGISHDTAVLLKKIITQAEAVKD LAYCLYDISANKRKDAKEATAYNALIADWTELTKAAAAIHDTSGDRQIRLDI
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102190; Mature: 102059
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTTNPKKKLIEVAIPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLV CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHH DDPSSDLDKFPTHEAQEAERKRLFGIIEELVKWENSTNEEVLERARAEIRKSCGGELPPV CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC YDPFSGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKAMIEIPPKFKDKEPIHPGAKDRQFY CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH RNAEGLAEDVKCYGEWVREKAWERIGHFYPQVDLPKEHGGGKGTVIAWIWARTVPSPDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCC FSNVEVPIASSFLLSAKAGKETWVEPIVDKQAKTISYRIRHGGTKAELAAAKEGTKAGRG CCCCCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHEEEEEECCCCHHHHHHHHCCCCCCCC ANFRCLMSDTAITPDYVKSNGRAGNMGQTLIAIVAEGNRGRAYVTPAEAHENLAFSAKPD CCEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCEEECHHHHCCCCEECCCCC WKPETSLPNDPRNFWTVDYGLTTFGDLFTDRQLVALNTFSDLVQAARTQIEADALVAGLS CCCCCCCCCCCCCEEEEECCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCC SDPTPLRDGGIGAKAYAEAVSVYLSFAIDRLADAGSSIATWSSSEFIRFTFARQAIPMTW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEHHCCCCCEE DFAECNVFSDSTGNYLGAVDWVWKALSGLVPNAAGTEIQHDAQNVRLPSGAVVSTDPPYY EHHHCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCHHHCCCCCCCEECCCCCCC DNIGYADLSDYFYVWLRRNIKDVYPDLGSTISVPKEEELVATPYRHGGKANAEEHFLTGM CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH TAAISSLARQSSSLFPATIYYAFKQSEVEQDGLSSTGWATFLQAVIEAGYAIVGTWPVRT HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCC ERSARTIATGTNALANSVVLVCRKKESTAEVVTRAEFIRALKRELPPAISELQAATIAPA CCCCHHHHCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC DMPQSAIGPGMGVFSRYKAVLESDDNPMSVKAALQLINKELDEYLGGIQGEFDADTRFAI CCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE TWFEQHGNGKGDYGVADNLARARGIAVESVKHAGIVDSAAGKVRILARDELDEDWDPEED EEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCCCC RHLTVWECLQHLVRLHEKDGISHDTAVLLKKIITQAEAVKDLAYCLYDISANKRKDAKEA CEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH TAYNALIADWTELTKAAAAIHDTSGDRQIRLDI HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure TSTTNPKKKLIEVAIPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLV CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHH DDPSSDLDKFPTHEAQEAERKRLFGIIEELVKWENSTNEEVLERARAEIRKSCGGELPPV CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC YDPFSGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKAMIEIPPKFKDKEPIHPGAKDRQFY CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH RNAEGLAEDVKCYGEWVREKAWERIGHFYPQVDLPKEHGGGKGTVIAWIWARTVPSPDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCC FSNVEVPIASSFLLSAKAGKETWVEPIVDKQAKTISYRIRHGGTKAELAAAKEGTKAGRG CCCCCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHEEEEEECCCCHHHHHHHHCCCCCCCC ANFRCLMSDTAITPDYVKSNGRAGNMGQTLIAIVAEGNRGRAYVTPAEAHENLAFSAKPD CCEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCEEECHHHHCCCCEECCCCC WKPETSLPNDPRNFWTVDYGLTTFGDLFTDRQLVALNTFSDLVQAARTQIEADALVAGLS CCCCCCCCCCCCCEEEEECCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCC SDPTPLRDGGIGAKAYAEAVSVYLSFAIDRLADAGSSIATWSSSEFIRFTFARQAIPMTW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEHHCCCCCEE DFAECNVFSDSTGNYLGAVDWVWKALSGLVPNAAGTEIQHDAQNVRLPSGAVVSTDPPYY EHHHCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCHHHCCCCCCCEECCCCCCC DNIGYADLSDYFYVWLRRNIKDVYPDLGSTISVPKEEELVATPYRHGGKANAEEHFLTGM CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH TAAISSLARQSSSLFPATIYYAFKQSEVEQDGLSSTGWATFLQAVIEAGYAIVGTWPVRT HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCC ERSARTIATGTNALANSVVLVCRKKESTAEVVTRAEFIRALKRELPPAISELQAATIAPA CCCCHHHHCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC DMPQSAIGPGMGVFSRYKAVLESDDNPMSVKAALQLINKELDEYLGGIQGEFDADTRFAI CCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE TWFEQHGNGKGDYGVADNLARARGIAVESVKHAGIVDSAAGKVRILARDELDEDWDPEED EEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCCCC RHLTVWECLQHLVRLHEKDGISHDTAVLLKKIITQAEAVKDLAYCLYDISANKRKDAKEA CEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH TAYNALIADWTELTKAAAAIHDTSGDRQIRLDI HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA