| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246912
Identifier: 154246912
GI number: 154246912
Start: 3304027
End: 3305835
Strand: Reverse
Name: 154246912
Synonym: Xaut_2982
Alternate gene names: NA
Gene position: 3305835-3304027 (Counterclockwise)
Preceding gene: 154246913
Following gene: 154246911
Centisome position: 62.27
GC content: 62.74
Gene sequence:
>1809_bases ATGAGCGATCGGCAGGCTTGGGACGGCCAGCCATACCTCGACGAACTGCGGCCTGGACGATTGGAGACGGTCAAGCTCGC ATTGTTCGCGACCTACTCGGTCGACCTGTCTGCGGTCGCGGCAGTGTTGCTCGCCCTGATTGGTCGCAACAATGACAAGG GCAGCGGAACAGCGGTCGATTTTGCCGAAGCGATAGACAGGCTGCGCGATCACGTCAGGATCATCATCCAGCGCGGGAGG ATCGCGCGCCCGGTGGCGCTTCCCCGTATCGCAGGCATCCTCGATCAGTTCATCGTCGAGCAACCCTACGATGAACGAGA GCGCAGCTGGCATCCGAAGATTGCTCTGGTCGCCTATAACTGCCCCAAAGCGGAAACGCGCTGGAAGCTCTGGATTGGCA GCCGGAACCTCACCCGATCTCAGGATCTCGACGCTGGCGTTTTGCTGGATGGCAGCGAAAAGCGCGCGAAGGGACGGGTT CGGCTCCCTGGCGTCGGCGCGCTCGGAGGCACTCTCGCACGCTCCGCATCGCGCGAGGATGCCGATGACATCTCGAAGCA GCTGGAGACGATCTGGTGGGATGCGCCCGACGGCTTTCGCTTACGCGGCCTCCTCAATGGGCTGGACCAAGGCGTTCCCT TGCCAGTGGAGCCGCCATCCGGCGCGATCAACGGCATAACGGTCATCAGCCCGTTCTTATCGTCCGACTTTCTAAAAAGG GCCGGCAAGTGGGGGCCCGCTGAATCCAGAACGCTGATTTCGTCGATGCCGGCTCTTGCCGATATCGCCAGCCTGTCCAG GACATCGCTGACCGGCTTCTCGAAAATCCTGGCCTATGCGGCGCCAGACGTGCTCGCTGACGAGTCTACGCTCGCTCTGC CCGGCGGCAACGAACCCGTGGCCGAAGATGATGTGGAGCCGGCGCCCCTTGCTCTCCATGCGAAGATCTTCTGCTTCCAC TCGGGCGAGAAGACCATCTTGAGGGTCGGAAGCGCCAATGCGACCGAAAGGGCATGGTCCGGGCGCAACTCGGAAATCAT GGTCGAACTCGAGGCGGGCGAAGCGTTCTCTTCCGGCCTGGCGTTCCTAGTCGGCAAAGCGACGCCTGTCACCATAGAGG AACTCGCCGCCGCAGACCTGGGCAGCGTGAGTGCAGCCGATGCGCTGGAAGAGTCGCGCAAGGTGCTCATGGCCTCCTGG GACCCGGTTCTGCGCCGCGACGGGGAATGCTTCTCGATCGATGCCCGGGCGGTTCCTTCGCTCGCCTACCCTGACCATGT GCTGCACGCCGGACCTGCAAATGGCGACCTGCTGACTTGGCCGACCGACGCCGTCCGCCTCGGTCTTGGACCGATCCCCT TGTCACTTCAATCTGCCTTCATTCAGGTCAGGATAAGCAGCCCAGACGGCGATTTGCGGTGGATGCAGCGGGTCACTGTC GATCCGCCTCTCGAAGAGCAGCGGGATCTAGCCGCGCTGGCCAGCCACATGGGGCTTCGCGCATTTCATGACTGGATGCG TGCGATGCTCGACGGCGACGCGCTTCCGGTCGGCGGCGGCGCATGGGATGACGATGCCGGATCGCGGGGCAACCGCTCCC AAGGCCTGGGTTATGACCGCCTTACGTTGGAGGATATTCTCACGGCTTGGGCACGCGATCGCAAAGCCTTCGGCCGGGTC GATCGCCATTTTGCGCCCTATGTGGATGCGCTTCTCGCCCACGGCGAAAACCTGAGCGAAACGGAGAGAGCTGACTTAAA CGAACTCGCTCAGATCTGGGCTATCGCGCGGACCCAGCTTGCCTCATGA
Upstream 100 bases:
>100_bases GGCGCATGGAATGGCAGGGCGAGCGACATGGTCGCGCCGAGCCGCTGCATTATCGCTGGGGAAATGTGAAGCGGCTCCTG CGAGATCTGGAGGATGTCGT
Downstream 100 bases:
>100_bases GCGCAAGATCGAAACCCTTCCAGGCCGCGACGGTCAAGGCTGCAACTGCCGCCCTATCGGGATGCAACCCACTGCGCCGG TTTCTTGTTGCGGACGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MSDRQAWDGQPYLDELRPGRLETVKLALFATYSVDLSAVAAVLLALIGRNNDKGSGTAVDFAEAIDRLRDHVRIIIQRGR IARPVALPRIAGILDQFIVEQPYDERERSWHPKIALVAYNCPKAETRWKLWIGSRNLTRSQDLDAGVLLDGSEKRAKGRV RLPGVGALGGTLARSASREDADDISKQLETIWWDAPDGFRLRGLLNGLDQGVPLPVEPPSGAINGITVISPFLSSDFLKR AGKWGPAESRTLISSMPALADIASLSRTSLTGFSKILAYAAPDVLADESTLALPGGNEPVAEDDVEPAPLALHAKIFCFH SGEKTILRVGSANATERAWSGRNSEIMVELEAGEAFSSGLAFLVGKATPVTIEELAAADLGSVSAADALEESRKVLMASW DPVLRRDGECFSIDARAVPSLAYPDHVLHAGPANGDLLTWPTDAVRLGLGPIPLSLQSAFIQVRISSPDGDLRWMQRVTV DPPLEEQRDLAALASHMGLRAFHDWMRAMLDGDALPVGGGAWDDDAGSRGNRSQGLGYDRLTLEDILTAWARDRKAFGRV DRHFAPYVDALLAHGENLSETERADLNELAQIWAIARTQLAS
Sequences:
>Translated_602_residues MSDRQAWDGQPYLDELRPGRLETVKLALFATYSVDLSAVAAVLLALIGRNNDKGSGTAVDFAEAIDRLRDHVRIIIQRGR IARPVALPRIAGILDQFIVEQPYDERERSWHPKIALVAYNCPKAETRWKLWIGSRNLTRSQDLDAGVLLDGSEKRAKGRV RLPGVGALGGTLARSASREDADDISKQLETIWWDAPDGFRLRGLLNGLDQGVPLPVEPPSGAINGITVISPFLSSDFLKR AGKWGPAESRTLISSMPALADIASLSRTSLTGFSKILAYAAPDVLADESTLALPGGNEPVAEDDVEPAPLALHAKIFCFH SGEKTILRVGSANATERAWSGRNSEIMVELEAGEAFSSGLAFLVGKATPVTIEELAAADLGSVSAADALEESRKVLMASW DPVLRRDGECFSIDARAVPSLAYPDHVLHAGPANGDLLTWPTDAVRLGLGPIPLSLQSAFIQVRISSPDGDLRWMQRVTV DPPLEEQRDLAALASHMGLRAFHDWMRAMLDGDALPVGGGAWDDDAGSRGNRSQGLGYDRLTLEDILTAWARDRKAFGRV DRHFAPYVDALLAHGENLSETERADLNELAQIWAIARTQLAS >Mature_601_residues SDRQAWDGQPYLDELRPGRLETVKLALFATYSVDLSAVAAVLLALIGRNNDKGSGTAVDFAEAIDRLRDHVRIIIQRGRI ARPVALPRIAGILDQFIVEQPYDERERSWHPKIALVAYNCPKAETRWKLWIGSRNLTRSQDLDAGVLLDGSEKRAKGRVR LPGVGALGGTLARSASREDADDISKQLETIWWDAPDGFRLRGLLNGLDQGVPLPVEPPSGAINGITVISPFLSSDFLKRA GKWGPAESRTLISSMPALADIASLSRTSLTGFSKILAYAAPDVLADESTLALPGGNEPVAEDDVEPAPLALHAKIFCFHS GEKTILRVGSANATERAWSGRNSEIMVELEAGEAFSSGLAFLVGKATPVTIEELAAADLGSVSAADALEESRKVLMASWD PVLRRDGECFSIDARAVPSLAYPDHVLHAGPANGDLLTWPTDAVRLGLGPIPLSLQSAFIQVRISSPDGDLRWMQRVTVD PPLEEQRDLAALASHMGLRAFHDWMRAMLDGDALPVGGGAWDDDAGSRGNRSQGLGYDRLTLEDILTAWARDRKAFGRVD RHFAPYVDALLAHGENLSETERADLNELAQIWAIARTQLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65222; Mature: 65091
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRQAWDGQPYLDELRPGRLETVKLALFATYSVDLSAVAAVLLALIGRNNDKGSGTAVD CCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHH FAEAIDRLRDHVRIIIQRGRIARPVALPRIAGILDQFIVEQPYDERERSWHPKIALVAYN HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEC CPKAETRWKLWIGSRNLTRSQDLDAGVLLDGSEKRAKGRVRLPGVGALGGTLARSASRED CCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHCCCCEECCCCCCHHHHHHHCCCCCC ADDISKQLETIWWDAPDGFRLRGLLNGLDQGVPLPVEPPSGAINGITVISPFLSSDFLKR HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AGKWGPAESRTLISSMPALADIASLSRTSLTGFSKILAYAAPDVLADESTLALPGGNEPV CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEECCCCCCCC AEDDVEPAPLALHAKIFCFHSGEKTILRVGSANATERAWSGRNSEIMVELEAGEAFSSGL CCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCHHCCC AFLVGKATPVTIEELAAADLGSVSAADALEESRKVLMASWDPVLRRDGECFSIDARAVPS EEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEECCCHHHHCCCCEEEECHHHCCC LAYPDHVLHAGPANGDLLTWPTDAVRLGLGPIPLSLQSAFIQVRISSPDGDLRWMQRVTV CCCCCHHEECCCCCCCEEECCCHHHHHCCCCCCHHEECEEEEEEECCCCCHHHHHHHCCC DPPLEEQRDLAALASHMGLRAFHDWMRAMLDGDALPVGGGAWDDDAGSRGNRSQGLGYDR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTLEDILTAWARDRKAFGRVDRHFAPYVDALLAHGENLSETERADLNELAQIWAIARTQL EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHH AS CC >Mature Secondary Structure SDRQAWDGQPYLDELRPGRLETVKLALFATYSVDLSAVAAVLLALIGRNNDKGSGTAVD CCCCCCCCCCCHHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHH FAEAIDRLRDHVRIIIQRGRIARPVALPRIAGILDQFIVEQPYDERERSWHPKIALVAYN HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEC CPKAETRWKLWIGSRNLTRSQDLDAGVLLDGSEKRAKGRVRLPGVGALGGTLARSASRED CCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCHHCCCCEECCCCCCHHHHHHHCCCCCC ADDISKQLETIWWDAPDGFRLRGLLNGLDQGVPLPVEPPSGAINGITVISPFLSSDFLKR HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AGKWGPAESRTLISSMPALADIASLSRTSLTGFSKILAYAAPDVLADESTLALPGGNEPV CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEECCCCCCCC AEDDVEPAPLALHAKIFCFHSGEKTILRVGSANATERAWSGRNSEIMVELEAGEAFSSGL CCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHCCCCCEEEEEEECCCCHHCCC AFLVGKATPVTIEELAAADLGSVSAADALEESRKVLMASWDPVLRRDGECFSIDARAVPS EEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEECCCHHHHCCCCEEEECHHHCCC LAYPDHVLHAGPANGDLLTWPTDAVRLGLGPIPLSLQSAFIQVRISSPDGDLRWMQRVTV CCCCCHHEECCCCCCCEEECCCHHHHHCCCCCCHHEECEEEEEEECCCCCHHHHHHHCCC DPPLEEQRDLAALASHMGLRAFHDWMRAMLDGDALPVGGGAWDDDAGSRGNRSQGLGYDR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTLEDILTAWARDRKAFGRVDRHFAPYVDALLAHGENLSETERADLNELAQIWAIARTQL EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHH AS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA