| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246777
Identifier: 154246777
GI number: 154246777
Start: 3166631
End: 3167848
Strand: Reverse
Name: 154246777
Synonym: Xaut_2838
Alternate gene names: NA
Gene position: 3167848-3166631 (Counterclockwise)
Preceding gene: 154246778
Following gene: 154246776
Centisome position: 59.67
GC content: 67.57
Gene sequence:
>1218_bases ATGGGCCGTCTGGATCGTTACATTTTCTCGACCGCCGCGGTGGCGTTCCTGGGTGTTGTGGTGGTGCTCGCCGGCATGAT CTGGGCGACGCAGGCCCTGCGCCAGCTCGACCTCGTCACCAGCCAGGGCCAGACCATCATTGCGTTCGTCGCCATCACCA GCCTCACCATGCCCACGCTGGTTCTGGTGATTGCCCCGGCGGCGCTGTTCATCGCCACCGCCTACACCTTGCTCAAGCTC AACGGCGACAGCGAGATCGTGGTGATGGCCTCCGCCGGCATGGGGCCATGGCGGCTGCTGCGGCCCCTCATCATCCTTGC CTTGCTGGTCTCGGCCTTCTGCGCGCTCCTCGCCATCAAGGTGGTGCCGGCAAGCCTTGCCACCTTCCGCGAGCAGGTCA CCAAGGTGCGCGCGGACGTGGTATCCTTCGTCGCCCAGCCGGGACGGTTCGTGAACCTGTCGCAGGGCCTGGTCTTCCAC GTGCGCGAGCGTGCGCCCAACGGGGTGATGCGCGGCATCTTCATCAATGACGCGCGCGATGATGGCGTCTCCACCTACCT CGCCGACCGCGGCCAGATCATCGAGAGCGACGCAGGCATCTTCCTGGTACTGGAGAACGGCTCCATCCAGCGCCGCGGCG GCGCGGCCAAGGAGGCCGAGAAGGACGCGAGCGAGGCCAACAAGGACGCCGGCAAGGACAAGGGCAAGTCGTCCAATTCC TCGGTGGTGGAATTCCAGCGCTACGCCTTCGATCTGTCGTCCCTCGCCCCCAATTCCCAGGGCCAGGACGTGAAGCCCAT GGAGCGGCCCCTGTCCTATGTGATGAATCCGCCGCAGGATGACCTCTACGTGCGCTTCTTCCCCGGCCGCTACCGGGAGG AGTTGCACAAGCGCCTGTCCGCCGGGCTCTATCCCATGGCCTTCTTCGCCATCGCCGCCGCCGCGCTGGCGAGCCCCCGC ACCACCCGGCAGAGCCAGGTCGCGGCGCTCGGCGCCATCATCCCGGCCATGGGCCTGGTGCAGATCGGCAATTTCGCCAT CGCCGGCCAGTTGAAGACCCAGGCCGCGGCGGTGCCGCTGATCTATCTTCTGCCCATCGTCACCGTGGCCCTCTGCGCCA TGGTGGTCCAGGGCTGGATCCGCCTCTCCGCGCCGGCCGCGCTGGTCGCCTTGGCGGAGTGGCTGAGGCAGCGCTTCACG CGGCGCGCGGCGGCCTGA
Upstream 100 bases:
>100_bases CCGGCGGCATTTGCGCCGGGCGCAGCTTCCGGTTATCCAGAGCGCGCTCGACTGGGGGAATGCGAGAGAGGGGCGGCTCC GCGCATTGAGGCACGCTTTG
Downstream 100 bases:
>100_bases TTCCCATGATCGGACGCATTCTCGGCTTCTATTTCGCGCGGCGGTTCGCGAGCGCGGTGGTGCTCATTTTCCTGTCCTGC GTCACGCTCATCGTGCTCGT
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease; Permease Protein; Permease YjgP/YjgQ Family; Transporter YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Permease; Permease YjgP
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTLVLVIAPAALFIATAYTLLKL NGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIKVVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFH VRERAPNGVMRGIFINDARDDGVSTYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSNS SVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNPPQDDLYVRFFPGRYREELHKRLSAGLYPMAFFAIAAAALASPR TTRQSQVAALGAIIPAMGLVQIGNFAIAGQLKTQAAAVPLIYLLPIVTVALCAMVVQGWIRLSAPAALVALAEWLRQRFT RRAAA
Sequences:
>Translated_405_residues MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTLVLVIAPAALFIATAYTLLKL NGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIKVVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFH VRERAPNGVMRGIFINDARDDGVSTYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSNS SVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNPPQDDLYVRFFPGRYREELHKRLSAGLYPMAFFAIAAAALASPR TTRQSQVAALGAIIPAMGLVQIGNFAIAGQLKTQAAAVPLIYLLPIVTVALCAMVVQGWIRLSAPAALVALAEWLRQRFT RRAAA >Mature_404_residues GRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTLVLVIAPAALFIATAYTLLKLN GDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIKVVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFHV RERAPNGVMRGIFINDARDDGVSTYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSNSS VVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNPPQDDLYVRFFPGRYREELHKRLSAGLYPMAFFAIAAAALASPRT TRQSQVAALGAIIPAMGLVQIGNFAIAGQLKTQAAAVPLIYLLPIVTVALCAMVVQGWIRLSAPAALVALAEWLRQRFTR RAAA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43577; Mature: 43445
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH VLVIAPAALFIATAYTLLKLNGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIK HHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFHVRERAPNGVMRGIFINDARD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEHHHCCCCCEEEEEEECCCC DGVSTYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSNS CCHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNPPQDDLYVRFFPGRYREELHKRLS HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH AGLYPMAFFAIAAAALASPRTTRQSQVAALGAIIPAMGLVQIGNFAIAGQLKTQAAAVPL CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH IYLLPIVTVALCAMVVQGWIRLSAPAALVALAEWLRQRFTRRAAA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRLDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTIIAFVAITSLTMPTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH VLVIAPAALFIATAYTLLKLNGDSEIVVMASAGMGPWRLLRPLIILALLVSAFCALLAIK HHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVPASLATFREQVTKVRADVVSFVAQPGRFVNLSQGLVFHVRERAPNGVMRGIFINDARD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEHHHCCCCCEEEEEEECCCC DGVSTYLADRGQIIESDAGIFLVLENGSIQRRGGAAKEAEKDASEANKDAGKDKGKSSNS CCHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SVVEFQRYAFDLSSLAPNSQGQDVKPMERPLSYVMNPPQDDLYVRFFPGRYREELHKRLS HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH AGLYPMAFFAIAAAALASPRTTRQSQVAALGAIIPAMGLVQIGNFAIAGQLKTQAAAVPL CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH IYLLPIVTVALCAMVVQGWIRLSAPAALVALAEWLRQRFTRRAAA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA