| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246621
Identifier: 154246621
GI number: 154246621
Start: 2969517
End: 2970188
Strand: Direct
Name: 154246621
Synonym: Xaut_2681
Alternate gene names: NA
Gene position: 2969517-2970188 (Clockwise)
Preceding gene: 154246619
Following gene: 154246624
Centisome position: 55.93
GC content: 60.86
Gene sequence:
>672_bases ATGATGGTTGAAGTATCATGTGAGGATTCAACCGTGCTCAGCGGGGGAGACACCCAGCGCCGGCTGCTTGCGCAGCTTCT TGAAGTCAAATCCGGCCTCTCCGTCGATGAGCTGGCCGGGCGGCTCGATATCAGTCGCAGCGCCGTCAAGCAGCACTTGT CGGGTCTGGAGCGCGACGGCTATGTCGCACGAGGCTCGGCCCGCAAGACCGGCGGCCGGCCGGAGCAGATTTATGTGCTG ACCGAAAGCGGGATCGGCATATTTCCCAAGCAATATTCCTGGTTCTCGCGGATCCTGCTCCAGACGCTGCGTGGGCGCAT CGGCGATGCCGACCTGGGCGAGTTCATGTTCAATCTCGGGGTCGACATGTCGGCCATGGCGCTGCCGCGCATCACCGGCA AGACGCGGATCGAGCGCATCGTCGAGATCGTTCGGATCATGAATGAAACCGGCTTTGTCGCGCAGACTGTTCCTGACGAA GAGCCAGGTAAGCTTCCGCGTATCGAGTGCCGGAACTGCGTCTATCACGACCTATCGAAGGATTATCCGGAGGTGTGCCA GTTCGACATCGGTTTCATCAGTGGCCTGATGGGTGCGGGTGTGGACCAGGAGGAGTGCATGCAGCGGGATGATGGGCAGG TCTGCCGCTTCCGCTTCGTACCCCTCGCCTGA
Upstream 100 bases:
>100_bases TAAAAGGGCGCCAGGCTGTGCCCGTTTCGGCGGCTCCGCGACGGCATCGCGGCCCCGACGCTTTTGGCAAGATACGTTGT GGAGTAAAGGGTTCGCTTCT
Downstream 100 bases:
>100_bases CGGCGGCGTGCGGCGCTATCTCAGGGTCTTGTCGAACGGTGTCGGCGATAGGTCCATGAAAGCGCGCGGATCGAAATCGG GATGGCGCATGACGGACCAG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; MarR Family Transcriptional Regulator; Transcriptional Regulator DeoR Family; Transcription Regulator; DeoR Family Transcriptional Regulator; ParR Family Transcriptional Regulator
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MMVEVSCEDSTVLSGGDTQRRLLAQLLEVKSGLSVDELAGRLDISRSAVKQHLSGLERDGYVARGSARKTGGRPEQIYVL TESGIGIFPKQYSWFSRILLQTLRGRIGDADLGEFMFNLGVDMSAMALPRITGKTRIERIVEIVRIMNETGFVAQTVPDE EPGKLPRIECRNCVYHDLSKDYPEVCQFDIGFISGLMGAGVDQEECMQRDDGQVCRFRFVPLA
Sequences:
>Translated_223_residues MMVEVSCEDSTVLSGGDTQRRLLAQLLEVKSGLSVDELAGRLDISRSAVKQHLSGLERDGYVARGSARKTGGRPEQIYVL TESGIGIFPKQYSWFSRILLQTLRGRIGDADLGEFMFNLGVDMSAMALPRITGKTRIERIVEIVRIMNETGFVAQTVPDE EPGKLPRIECRNCVYHDLSKDYPEVCQFDIGFISGLMGAGVDQEECMQRDDGQVCRFRFVPLA >Mature_223_residues MMVEVSCEDSTVLSGGDTQRRLLAQLLEVKSGLSVDELAGRLDISRSAVKQHLSGLERDGYVARGSARKTGGRPEQIYVL TESGIGIFPKQYSWFSRILLQTLRGRIGDADLGEFMFNLGVDMSAMALPRITGKTRIERIVEIVRIMNETGFVAQTVPDE EPGKLPRIECRNCVYHDLSKDYPEVCQFDIGFISGLMGAGVDQEECMQRDDGQVCRFRFVPLA
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24814; Mature: 24814
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVEVSCEDSTVLSGGDTQRRLLAQLLEVKSGLSVDELAGRLDISRSAVKQHLSGLERDG CEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC YVARGSARKTGGRPEQIYVLTESGIGIFPKQYSWFSRILLQTLRGRIGDADLGEFMFNLG EEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC VDMSAMALPRITGKTRIERIVEIVRIMNETGFVAQTVPDEEPGKLPRIECRNCVYHDLSK CCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCC DYPEVCQFDIGFISGLMGAGVDQEECMQRDDGQVCRFRFVPLA CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCC >Mature Secondary Structure MMVEVSCEDSTVLSGGDTQRRLLAQLLEVKSGLSVDELAGRLDISRSAVKQHLSGLERDG CEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC YVARGSARKTGGRPEQIYVLTESGIGIFPKQYSWFSRILLQTLRGRIGDADLGEFMFNLG EEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC VDMSAMALPRITGKTRIERIVEIVRIMNETGFVAQTVPDEEPGKLPRIECRNCVYHDLSK CCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCC DYPEVCQFDIGFISGLMGAGVDQEECMQRDDGQVCRFRFVPLA CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA