| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is fdxA [H]
Identifier: 154246582
GI number: 154246582
Start: 2933749
End: 2934084
Strand: Direct
Name: fdxA [H]
Synonym: Xaut_2641
Alternate gene names: 154246582
Gene position: 2933749-2934084 (Clockwise)
Preceding gene: 154246581
Following gene: 154246583
Centisome position: 55.26
GC content: 63.99
Gene sequence:
>336_bases ATGACTTACGTCGTCACCGAGAACTGCATCCGCTGCAAGTACATGGATTGCGTGTCCGTGTGCCCGGTGGACTGTTTCTA CGAGGGCGAGAACATGCTCGTCATCCACCCCGACGAGTGCATCGACTGCGGGGTCTGCGAGCCGGAATGCCCGGCCGAGG CCATCAAGCCCGATGCCGAGCTGGGGCTCGAGAAGTGGCTCGCGCTCAACGCCGAATATGCCAAGGCTTGGCCCAATATC ACGCTCAAGCGCGACCCGCCGGCCGACGCCAAGGAGTGGGACGGCAAGCCGGGCAAGGAAGAGCTGTTCTCCCCGGAGCC CGGCCAAGGCGACTGA
Upstream 100 bases:
>100_bases CGAAATAACAGAAGTGTGACGGGTAATGGTGGCTGCGGCCTTGCGTGCGCTTGAACGGCGCGCCGGGCTGCGCTAACCGA GCCCTCGAAAGGGATTTTCC
Downstream 100 bases:
>100_bases TCGGGAGCCTGGCGCGCACCGCGCTCTCAGGCTTCGCGATGCGGTTCATGATCCGATCGGGTTGATCAACCTGATCGGGG TGGACCATGTTAAGGCGTTT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAELGLEKWLALNAEYAKAWPNI TLKRDPPADAKEWDGKPGKEELFSPEPGQGD
Sequences:
>Translated_111_residues MTYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAELGLEKWLALNAEYAKAWPNI TLKRDPPADAKEWDGKPGKEELFSPEPGQGD >Mature_110_residues TYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAELGLEKWLALNAEYAKAWPNIT LKRDPPADAKEWDGKPGKEELFSPEPGQGD
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR000813 - InterPro: IPR022569 [H]
Pfam domain/function: PF11953 DUF3470; PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 12385; Mature: 12254
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAE CEEEECCCCEEEEECCHHCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHCCCCHH LGLEKWLALNAEYAKAWPNITLKRDPPADAKEWDGKPGKEELFSPEPGQGD CCHHHHHHCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TYVVTENCIRCKYMDCVSVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDAE EEEECCCCEEEEECCHHCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHCCCCHH LGLEKWLALNAEYAKAWPNITLKRDPPADAKEWDGKPGKEELFSPEPGQGD CCHHHHHHCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7535830 [H]