| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246537
Identifier: 154246537
GI number: 154246537
Start: 2885653
End: 2886138
Strand: Direct
Name: 154246537
Synonym: Xaut_2596
Alternate gene names: NA
Gene position: 2885653-2886138 (Clockwise)
Preceding gene: 154246536
Following gene: 154246539
Centisome position: 54.35
GC content: 66.46
Gene sequence:
>486_bases ATGCCCATTTCGGTCGGCGATAAACTGCCCAACGCCACCTTCCGCGTTCCCACCGAAGACGGCCCGGTGCCGAAGACCAC CGACGAGATCTTCAAGGGCAAGAAGGTGGTGCTGTTCGCGGTGCCGGGCGCCTTCACGCCCACCTGCCACAAGAACCACC TGCCGGGCTACGTGCACGAGGCCGACGCCATCAAGGCCAAGGGCGTGGATGCCATCGCCGTGGTCTCGGTGAACGATCCC TTCGTCATGGGCGCCTGGGAGAAGGCTTCCGGCGCGGATGGCAAGATCGTGTTCCTGGCCGATCCGGACGCCGCCTTTTC CACCGCCCTCGACCTCACCTTCGACGGCTCGGCCGCCGGCCTCGGCGTGCGCTCCAAGCGCTATTCCATGGTGGTGGAGG ACGGCGTGGTGACCAGCCTGAATGTGGAGGACGTGCCCTCGAAGGCCGACATCTCCGGCGCGCCCGCCCTTTTGGCGCAG CTCTGA
Upstream 100 bases:
>100_bases GTCCGGCCTGCCGCCCGGGCCTCCCGGTGCGCTTTTCTCCTCCGTAAAACCCCGTATTGTCGGCGCGGGCCGGAACGGCC CGCGACTGTCGGAGAAAACG
Downstream 100 bases:
>100_bases GCATTTCCGCGCCGCATTGACCCTCCGGCCTGGCCGGGGGGCTTTTTTCAGGCGATTCCGGCCTCGGGCCGGCACCGTGC GCCCGGCCGCAGGCTCAGGC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPISVGDKLPNATFRVPTEDGPVPKTTDEIFKGKKVVLFAVPGAFTPTCHKNHLPGYVHEADAIKAKGVDAIAVVSVNDP FVMGAWEKASGADGKIVFLADPDAAFSTALDLTFDGSAAGLGVRSKRYSMVVEDGVVTSLNVEDVPSKADISGAPALLAQ L
Sequences:
>Translated_161_residues MPISVGDKLPNATFRVPTEDGPVPKTTDEIFKGKKVVLFAVPGAFTPTCHKNHLPGYVHEADAIKAKGVDAIAVVSVNDP FVMGAWEKASGADGKIVFLADPDAAFSTALDLTFDGSAAGLGVRSKRYSMVVEDGVVTSLNVEDVPSKADISGAPALLAQ L >Mature_160_residues PISVGDKLPNATFRVPTEDGPVPKTTDEIFKGKKVVLFAVPGAFTPTCHKNHLPGYVHEADAIKAKGVDAIAVVSVNDPF VMGAWEKASGADGKIVFLADPDAAFSTALDLTFDGSAAGLGVRSKRYSMVVEDGVVTSLNVEDVPSKADISGAPALLAQL
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=163, Percent_Identity=49.6932515337423, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6323138, Length=152, Percent_Identity=36.8421052631579, Blast_Score=87, Evalue=2e-18, Organism=Drosophila melanogaster, GI78706776, Length=143, Percent_Identity=58.041958041958, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI78709078, Length=143, Percent_Identity=58.041958041958, Blast_Score=152, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16737; Mature: 16606
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISVGDKLPNATFRVPTEDGPVPKTTDEIFKGKKVVLFAVPGAFTPTCHKNHLPGYVHE CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEC ADAIKAKGVDAIAVVSVNDPFVMGAWEKASGADGKIVFLADPDAAFSTALDLTFDGSAAG CCCEEECCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCC LGVRSKRYSMVVEDGVVTSLNVEDVPSKADISGAPALLAQL CCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure PISVGDKLPNATFRVPTEDGPVPKTTDEIFKGKKVVLFAVPGAFTPTCHKNHLPGYVHE CCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEC ADAIKAKGVDAIAVVSVNDPFVMGAWEKASGADGKIVFLADPDAAFSTALDLTFDGSAAG CCCEEECCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCC LGVRSKRYSMVVEDGVVTSLNVEDVPSKADISGAPALLAQL CCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]