| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is argE [H]
Identifier: 154246523
GI number: 154246523
Start: 2872890
End: 2874083
Strand: Direct
Name: argE [H]
Synonym: Xaut_2582
Alternate gene names: 154246523
Gene position: 2872890-2874083 (Clockwise)
Preceding gene: 154246521
Following gene: 154246524
Centisome position: 54.11
GC content: 69.85
Gene sequence:
>1194_bases ATGAGCAGGCAAGTATCATCTGAAGAAATACTTGATAAACTCATCTCAATTTCTTCAATTACAGATACGCCCAATGAGGA GGTGGTCGCCGCCATCGCGGCCATCGCCGCCCCCTTCGCCCGCGTGCGCCGCCTGCCCAACGCCGGCGGGGAGAAGACCG CGCTGCTGATTTCCATCGGGCCGGAGGACCGCCCCGGCATCGTGCTCTCCGCCCACACCGATGTGGTGGCGGTGGAGGGG CAGCCTTGGACCAGCAATCCCTTCCGCATCGCCGCGCGCGATGGCCGGCTTTACGGGCGCGGCACGTCCGACATGAAGGG CTTCATCGCCTGTGTCCTCGCGGCGCTGCCCGCCTTCGCCGCCGCCGATCCGCTTACCCCCGTGCACGTTGCGCTTTCCT ATGATGAGGAGATCGGCTGCAAGGGCGCGGGCGATCTCGTGGCGGCGGTGGCGGCCCTGCCGGCGCGCCCGCTCATGTGC ATCGTCGGCGAGCCTACGGCCATGAAGGTGAAGCGCGCCCACAAGGGCAAGACCGGCTGGCGCGCCACGGCGCTGGGCCG TACCGGCCATTCGGCCCTGCCGCACCAGGCGGCGAACGCGGTGACGGCGCTGGCCCGCCTCGCCGCCCGGCTCGCGGATC TGGCGGACGAGTTGAAGACCGGCGCGCAGGACCGCGCCTTCGATCCGCCCTATGCCACGCTCCACATCGGCTCCCTCCAT GGCGGCGGGGCGCTCAACGTGGTGCCGGACCGGGCGGTGATGGAATTCGAGCTGCGCACCATTCCCGGCAGCGACACCAA CACCCTGTTCCGCCGCATCGAGGCGCTGGTGCAGGAGGCGCGCGCGGTCCTGAAGGCGCAAGCGCCCGAGGCCGATCTGC TGCTGGAGGAGCTGTCCGCCTATCCCGCCCTCGCCACCGCCTCCGACGCGCCGGAGGCCGCTGCCGTGGCGCGGCTCACC GGCGACAATGGCGTGCCGGGCACCATCGCCTTCGGCACCGAGGCCGGGCTCTATGCGCAGGCCGGCATTCCCACCCTCGT CTGTGGCCCCGGCGACATCGCCCGCGCCCACAAGGCGGACGAATGGATCGGCCGCGAGGAGCTTGCCCAGTGCGATGCCA TGCTGGCGAGACTCGCTGATATCATCCGCCGTCCGGCGGCCGACTGGATCAATGACCAACCGCGCCGCACCTGA
Upstream 100 bases:
>100_bases GAGGTGATGGCGATGCCGAAGGCCCCGGTTTGCGGGCAGCGCGCGGCGATGGAATAGGTCATTCCCGTCTCCTTTTCATG GAATTTCTAGCGAGGCGGCC
Downstream 100 bases:
>100_bases GCCGGGACGCAAGACTGAGAGGCCGTTCATGTCGACAGAGAAAGCCGCCTTCACCCGTCCGGCCGCCCGCCTTACCCATG CCGGCGCGCTGGTCGCGCTC
Product: acetylornithine deacetylase ArgE
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSRQVSSEEILDKLISISSITDTPNEEVVAAIAAIAAPFARVRRLPNAGGEKTALLISIGPEDRPGIVLSAHTDVVAVEG QPWTSNPFRIAARDGRLYGRGTSDMKGFIACVLAALPAFAAADPLTPVHVALSYDEEIGCKGAGDLVAAVAALPARPLMC IVGEPTAMKVKRAHKGKTGWRATALGRTGHSALPHQAANAVTALARLAARLADLADELKTGAQDRAFDPPYATLHIGSLH GGGALNVVPDRAVMEFELRTIPGSDTNTLFRRIEALVQEARAVLKAQAPEADLLLEELSAYPALATASDAPEAAAVARLT GDNGVPGTIAFGTEAGLYAQAGIPTLVCGPGDIARAHKADEWIGREELAQCDAMLARLADIIRRPAADWINDQPRRT
Sequences:
>Translated_397_residues MSRQVSSEEILDKLISISSITDTPNEEVVAAIAAIAAPFARVRRLPNAGGEKTALLISIGPEDRPGIVLSAHTDVVAVEG QPWTSNPFRIAARDGRLYGRGTSDMKGFIACVLAALPAFAAADPLTPVHVALSYDEEIGCKGAGDLVAAVAALPARPLMC IVGEPTAMKVKRAHKGKTGWRATALGRTGHSALPHQAANAVTALARLAARLADLADELKTGAQDRAFDPPYATLHIGSLH GGGALNVVPDRAVMEFELRTIPGSDTNTLFRRIEALVQEARAVLKAQAPEADLLLEELSAYPALATASDAPEAAAVARLT GDNGVPGTIAFGTEAGLYAQAGIPTLVCGPGDIARAHKADEWIGREELAQCDAMLARLADIIRRPAADWINDQPRRT >Mature_396_residues SRQVSSEEILDKLISISSITDTPNEEVVAAIAAIAAPFARVRRLPNAGGEKTALLISIGPEDRPGIVLSAHTDVVAVEGQ PWTSNPFRIAARDGRLYGRGTSDMKGFIACVLAALPAFAAADPLTPVHVALSYDEEIGCKGAGDLVAAVAALPARPLMCI VGEPTAMKVKRAHKGKTGWRATALGRTGHSALPHQAANAVTALARLAARLADLADELKTGAQDRAFDPPYATLHIGSLHG GGALNVVPDRAVMEFELRTIPGSDTNTLFRRIEALVQEARAVLKAQAPEADLLLEELSAYPALATASDAPEAAAVARLTG DNGVPGTIAFGTEAGLYAQAGIPTLVCGPGDIARAHKADEWIGREELAQCDAMLARLADIIRRPAADWINDQPRRT
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=314, Percent_Identity=34.0764331210191, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1788816, Length=204, Percent_Identity=31.8627450980392, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 41618; Mature: 41487
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00759 ARGE_DAPE_CPG2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQVSSEEILDKLISISSITDTPNEEVVAAIAAIAAPFARVRRLPNAGGEKTALLISIG CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC PEDRPGIVLSAHTDVVAVEGQPWTSNPFRIAARDGRLYGRGTSDMKGFIACVLAALPAFA CCCCCCEEEEECCCEEEECCCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHH AADPLTPVHVALSYDEEIGCKGAGDLVAAVAALPARPLMCIVGEPTAMKVKRAHKGKTGW HCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCC RATALGRTGHSALPHQAANAVTALARLAARLADLADELKTGAQDRAFDPPYATLHIGSLH EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC GGGALNVVPDRAVMEFELRTIPGSDTNTLFRRIEALVQEARAVLKAQAPEADLLLEELSA CCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC YPALATASDAPEAAAVARLTGDNGVPGTIAFGTEAGLYAQAGIPTLVCGPGDIARAHKAD CCCCCCCCCCCCHHHEEEECCCCCCCCEEEECCCCCEEEECCCCEEEECCCHHHHHHHHH EWIGREELAQCDAMLARLADIIRRPAADWINDQPRRT HHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure SRQVSSEEILDKLISISSITDTPNEEVVAAIAAIAAPFARVRRLPNAGGEKTALLISIG CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC PEDRPGIVLSAHTDVVAVEGQPWTSNPFRIAARDGRLYGRGTSDMKGFIACVLAALPAFA CCCCCCEEEEECCCEEEECCCCCCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHH AADPLTPVHVALSYDEEIGCKGAGDLVAAVAALPARPLMCIVGEPTAMKVKRAHKGKTGW HCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCC RATALGRTGHSALPHQAANAVTALARLAARLADLADELKTGAQDRAFDPPYATLHIGSLH EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC GGGALNVVPDRAVMEFELRTIPGSDTNTLFRRIEALVQEARAVLKAQAPEADLLLEELSA CCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC YPALATASDAPEAAAVARLTGDNGVPGTIAFGTEAGLYAQAGIPTLVCGPGDIARAHKAD CCCCCCCCCCCCHHHEEEECCCCCCCCEEEECCCCCEEEECCCCEEEECCCHHHHHHHHH EWIGREELAQCDAMLARLADIIRRPAADWINDQPRRT HHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9829957 [H]