| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is prs [H]
Identifier: 154246494
GI number: 154246494
Start: 2846954
End: 2847907
Strand: Direct
Name: prs [H]
Synonym: Xaut_2553
Alternate gene names: 154246494
Gene position: 2846954-2847907 (Clockwise)
Preceding gene: 154246493
Following gene: 154246495
Centisome position: 53.63
GC content: 66.35
Gene sequence:
>954_bases ATGTCAGCGGAGAACGGTCCCATGAAGCTCGTCGCGGGCAACTCAAACCGCGCGCTCGCTGAAGCCATCGCCGCTTATCT CGCCACCCCGCTGACCAAGGCGGTGGTGCGACGCTTCGCGGACATGGAAATCTTCGTCGAGATCCAGGAAAACGTGCGCG GGCAGGATGTGTTCGTGGTGCAGTCCACGGCCTTTCCGGCGAACGACCGCCTGATGGAGCTGCTCATCATCATCGATGCG CTGCGGCGGGCCTCGTCCAAGCGCATCACGGCGGTGCTGCCCTATTTCGGCTACGCCCGGCAGGACCGCAAGCCCGGCCC GCGCACGCCGATCTCCGCCAAGCTGGTGGCCAACCTCATCACCCATGCCGGCGCCGACCGGGTGATGACGCTGGACCTGC ATGCAGGCCAGATCCAGGGCTTCTTCGACATCCCCACCGACAATCTCTATTCGGCCCCGGTGATGGTGCGCGACATCAAG GAGCGGTTCGACCTCTCCAACGTCATGGTGGTTTCGCCGGACGTGGGCGGCGTGGTCCGCGCCCGGGCGCTGGCCAAGCG CATCGACGCCCAGCTCGCCATCGTCGACAAGCGCCGCGAGCGCCCCGGCGAGAGCGAGGTGATGAACGTCATCGGCAATG TGGAAGGCCGCTCCTGCATCCTGGTGGACGACATCGTCGATTCGGGTGGCACGCTGGTGAACGCGGCCGAGGCTCTGCTG GCCCGCGGCGCAAAGGAAGTGCACGCCTACATCACCCATGGCGTGCTGTCGGGCGGGGCAGTGGCGCGCATCACCGCGTC CAAGCTCAAGGAACTGGTGATCACCGATTCGATCCAGCCCACCGAGGCGGTGCGGGTGGCCCGCAACATCCGCGTGCTCT CCATCGCCACCCTCATCGGCGAGGCCATCGCCCGCACGGCCCACGAAGAATCGGTCTCCAGCCTGTTCGACTGA
Upstream 100 bases:
>100_bases TCGCCGATGCCTTGGGGCCTTTACAAGATTGTGACGGCCCGCCTATCAGAACGCCTCAAGCTTTCGATCAGCTCCCGGCC GGACCGGGGCGGAGCGACCC
Downstream 100 bases:
>100_bases GGCGTGTTGCTGCGGTGGATGGGGCGGAATGTTGCGCGAAAGGGTTGCGGTCCCTTAAATGAAGCCCGACCAATCGGCGG GGCGGGGGCTCCAGTGCTCG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSAENGPMKLVAGNSNRALAEAIAAYLATPLTKAVVRRFADMEIFVEIQENVRGQDVFVVQSTAFPANDRLMELLIIIDA LRRASSKRITAVLPYFGYARQDRKPGPRTPISAKLVANLITHAGADRVMTLDLHAGQIQGFFDIPTDNLYSAPVMVRDIK ERFDLSNVMVVSPDVGGVVRARALAKRIDAQLAIVDKRRERPGESEVMNVIGNVEGRSCILVDDIVDSGGTLVNAAEALL ARGAKEVHAYITHGVLSGGAVARITASKLKELVITDSIQPTEAVRVARNIRVLSIATLIGEAIARTAHEESVSSLFD
Sequences:
>Translated_317_residues MSAENGPMKLVAGNSNRALAEAIAAYLATPLTKAVVRRFADMEIFVEIQENVRGQDVFVVQSTAFPANDRLMELLIIIDA LRRASSKRITAVLPYFGYARQDRKPGPRTPISAKLVANLITHAGADRVMTLDLHAGQIQGFFDIPTDNLYSAPVMVRDIK ERFDLSNVMVVSPDVGGVVRARALAKRIDAQLAIVDKRRERPGESEVMNVIGNVEGRSCILVDDIVDSGGTLVNAAEALL ARGAKEVHAYITHGVLSGGAVARITASKLKELVITDSIQPTEAVRVARNIRVLSIATLIGEAIARTAHEESVSSLFD >Mature_316_residues SAENGPMKLVAGNSNRALAEAIAAYLATPLTKAVVRRFADMEIFVEIQENVRGQDVFVVQSTAFPANDRLMELLIIIDAL RRASSKRITAVLPYFGYARQDRKPGPRTPISAKLVANLITHAGADRVMTLDLHAGQIQGFFDIPTDNLYSAPVMVRDIKE RFDLSNVMVVSPDVGGVVRARALAKRIDAQLAIVDKRRERPGESEVMNVIGNVEGRSCILVDDIVDSGGTLVNAAEALLA RGAKEVHAYITHGVLSGGAVARITASKLKELVITDSIQPTEAVRVARNIRVLSIATLIGEAIARTAHEESVSSLFD
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=308, Percent_Identity=45.7792207792208, Blast_Score=291, Evalue=7e-79, Organism=Homo sapiens, GI4506127, Length=310, Percent_Identity=45.8064516129032, Blast_Score=290, Evalue=8e-79, Organism=Homo sapiens, GI28557709, Length=310, Percent_Identity=45.4838709677419, Blast_Score=289, Evalue=2e-78, Organism=Homo sapiens, GI84875539, Length=311, Percent_Identity=45.3376205787781, Blast_Score=285, Evalue=4e-77, Organism=Homo sapiens, GI4506133, Length=352, Percent_Identity=34.6590909090909, Blast_Score=175, Evalue=4e-44, Organism=Homo sapiens, GI194018537, Length=351, Percent_Identity=33.9031339031339, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI310128524, Length=141, Percent_Identity=34.0425531914894, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI310115209, Length=141, Percent_Identity=34.0425531914894, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI310118259, Length=141, Percent_Identity=34.0425531914894, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI310119946, Length=141, Percent_Identity=34.0425531914894, Blast_Score=85, Evalue=9e-17, Organism=Escherichia coli, GI1787458, Length=312, Percent_Identity=52.8846153846154, Blast_Score=338, Evalue=4e-94, Organism=Caenorhabditis elegans, GI25149168, Length=310, Percent_Identity=45.8064516129032, Blast_Score=288, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17554702, Length=310, Percent_Identity=45.8064516129032, Blast_Score=288, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17554704, Length=308, Percent_Identity=45.7792207792208, Blast_Score=286, Evalue=7e-78, Organism=Caenorhabditis elegans, GI71989924, Length=310, Percent_Identity=45.8064516129032, Blast_Score=286, Evalue=7e-78, Organism=Caenorhabditis elegans, GI17570245, Length=337, Percent_Identity=34.7181008902077, Blast_Score=193, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320946, Length=311, Percent_Identity=45.016077170418, Blast_Score=274, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6321776, Length=310, Percent_Identity=45.8064516129032, Blast_Score=273, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6319403, Length=312, Percent_Identity=45.8333333333333, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=39.7959183673469, Blast_Score=150, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324511, Length=86, Percent_Identity=46.5116279069767, Blast_Score=86, Evalue=7e-18, Organism=Drosophila melanogaster, GI21355239, Length=310, Percent_Identity=45.1612903225806, Blast_Score=282, Evalue=2e-76, Organism=Drosophila melanogaster, GI45551540, Length=333, Percent_Identity=42.042042042042, Blast_Score=270, Evalue=1e-72, Organism=Drosophila melanogaster, GI24651458, Length=352, Percent_Identity=30.9659090909091, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24651456, Length=352, Percent_Identity=30.9659090909091, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI281362873, Length=352, Percent_Identity=30.9659090909091, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24651454, Length=352, Percent_Identity=30.9659090909091, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24651462, Length=371, Percent_Identity=30.7277628032345, Blast_Score=168, Evalue=4e-42, Organism=Drosophila melanogaster, GI24651464, Length=371, Percent_Identity=30.7277628032345, Blast_Score=168, Evalue=4e-42, Organism=Drosophila melanogaster, GI45552010, Length=371, Percent_Identity=30.7277628032345, Blast_Score=168, Evalue=5e-42,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34247; Mature: 34116
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAENGPMKLVAGNSNRALAEAIAAYLATPLTKAVVRRFADMEIFVEIQENVRGQDVFVV CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCCCEEEEE QSTAFPANDRLMELLIIIDALRRASSKRITAVLPYFGYARQDRKPGPRTPISAKLVANLI EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHH THAGADRVMTLDLHAGQIQGFFDIPTDNLYSAPVMVRDIKERFDLSNVMVVSPDVGGVVR HHCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHH ARALAKRIDAQLAIVDKRRERPGESEVMNVIGNVEGRSCILVDDIVDSGGTLVNAAEALL HHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHCCCCCEEEEEEHHHCCCCCHHHHHHHHH ARGAKEVHAYITHGVLSGGAVARITASKLKELVITDSIQPTEAVRVARNIRVLSIATLIG HCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH EAIARTAHEESVSSLFD HHHHHHHHHHHHHHHCC >Mature Secondary Structure SAENGPMKLVAGNSNRALAEAIAAYLATPLTKAVVRRFADMEIFVEIQENVRGQDVFVV CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCCCEEEEE QSTAFPANDRLMELLIIIDALRRASSKRITAVLPYFGYARQDRKPGPRTPISAKLVANLI EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHH THAGADRVMTLDLHAGQIQGFFDIPTDNLYSAPVMVRDIKERFDLSNVMVVSPDVGGVVR HHCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHH ARALAKRIDAQLAIVDKRRERPGESEVMNVIGNVEGRSCILVDDIVDSGGTLVNAAEALL HHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHCCCCCEEEEEEHHHCCCCCHHHHHHHHH ARGAKEVHAYITHGVLSGGAVARITASKLKELVITDSIQPTEAVRVARNIRVLSIATLIG HCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH EAIARTAHEESVSSLFD HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]