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The map label for this gene is ompW [C]

Identifier: 154245911

GI number: 154245911

Start: 2224962

End: 2225648

Strand: Reverse

Name: ompW [C]

Synonym: Xaut_1968

Alternate gene names: 154245911

Gene position: 2225648-2224962 (Counterclockwise)

Preceding gene: 154245913

Following gene: 154245910

Centisome position: 41.92

GC content: 63.9

Gene sequence:

>687_bases
ATGAAGAAGTTCGGTCTGGGTGCCATTGTTGCGGCGGGCTTCGCCGCCTTTTCGATGGGCGGTGCGGTGGCGGCAGACCT
GTCGACCCCGGTCTACAAGGCTCCGGTGGTCGAGGAGGCCCTGAGCCCCTGGCAGATCCGCGTTCGCGCACTGTACGTGA
TGCCGGAGAACGGCGGGTCCGTGAACGGCGTCCTCGGCTCCGACCTCACCTATTCCGACTCGGTGGTGCCGGAACTCGAC
ATCACCTACTACTTCACCAAGAACATCGCGGCCGAACTCATCCTCGGCGTCACCCCCCACGACATCAACGGCGCGGGCAC
CATCACCAGCCTCGGCCAGGTGGGCAAGGTGTGGCTGCTGCCCCCGACCCTCACCCTGCAGTACCACTTCACCGATTTCG
GGCCGTTCAAGCCCTATATCGGCGCTGGTGTGAACTACACCGTGTTTTTCAATCAGGACGCCAAGAACCCGGCGTTCGCC
AGCGTCGACGTGCACGACACCTGGGGCCTCGCACTGCAGGCCGGCTTCGACTGGATGATCGACCGTCACTGGGGCATCAA
CGTGGACGTGAAGAAGCTCTTCCTGGAGCCCTCCTTCACCCTGCAGACCGTCGGTGGCAGCTACCTCACCGGCGGCGCCG
ACCTGAACCCCTGGATCTTCGGTACGGGCGTCACCTACCGTTTCTGA

Upstream 100 bases:

>100_bases
CGCGACAGACCCAAAATTGACATAAATCAAACTTTCGGGGGATCAGCAGCGCGATGTGTTGCCCTATGGTTGTGTTGATC
AAGTTCGCGGGAGCGGGGCA

Downstream 100 bases:

>100_bases
TAAGGTCCTTCCAGACCTGACCTCCAGAACAGCGCCGGTCTTCCGGCGCTGTTTTTTTTCGCGCGTGCAGCGCACCCGCC
CGCGCCCGGAACGTTGGCAG

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKFGLGAIVAAGFAAFSMGGAVAADLSTPVYKAPVVEEALSPWQIRVRALYVMPENGGSVNGVLGSDLTYSDSVVPELD
ITYYFTKNIAAELILGVTPHDINGAGTITSLGQVGKVWLLPPTLTLQYHFTDFGPFKPYIGAGVNYTVFFNQDAKNPAFA
SVDVHDTWGLALQAGFDWMIDRHWGINVDVKKLFLEPSFTLQTVGGSYLTGGADLNPWIFGTGVTYRF

Sequences:

>Translated_228_residues
MKKFGLGAIVAAGFAAFSMGGAVAADLSTPVYKAPVVEEALSPWQIRVRALYVMPENGGSVNGVLGSDLTYSDSVVPELD
ITYYFTKNIAAELILGVTPHDINGAGTITSLGQVGKVWLLPPTLTLQYHFTDFGPFKPYIGAGVNYTVFFNQDAKNPAFA
SVDVHDTWGLALQAGFDWMIDRHWGINVDVKKLFLEPSFTLQTVGGSYLTGGADLNPWIFGTGVTYRF
>Mature_228_residues
MKKFGLGAIVAAGFAAFSMGGAVAADLSTPVYKAPVVEEALSPWQIRVRALYVMPENGGSVNGVLGSDLTYSDSVVPELD
ITYYFTKNIAAELILGVTPHDINGAGTITSLGQVGKVWLLPPTLTLQYHFTDFGPFKPYIGAGVNYTVFFNQDAKNPAFA
SVDVHDTWGLALQAGFDWMIDRHWGINVDVKKLFLEPSFTLQTVGGSYLTGGADLNPWIFGTGVTYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=215, Percent_Identity=32.5581395348837, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 24610; Mature: 24610

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFGLGAIVAAGFAAFSMGGAVAADLSTPVYKAPVVEEALSPWQIRVRALYVMPENGGS
CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEECCCHHHHCCCEEEEEEEEEEEECCCCE
VNGVLGSDLTYSDSVVPELDITYYFTKNIAAELILGVTPHDINGAGTITSLGQVGKVWLL
ECEEECCCCEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEE
PPTLTLQYHFTDFGPFKPYIGAGVNYTVFFNQDAKNPAFASVDVHDTWGLALQAGFDWMI
CCEEEEEEEECCCCCCCCHHCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCEEEE
DRHWGINVDVKKLFLEPSFTLQTVGGSYLTGGADLNPWIFGTGVTYRF
ECCCCCCEEEEEEEECCCEEEEECCCCEEECCCCCCCEEEECCEEEEC
>Mature Secondary Structure
MKKFGLGAIVAAGFAAFSMGGAVAADLSTPVYKAPVVEEALSPWQIRVRALYVMPENGGS
CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEECCCHHHHCCCEEEEEEEEEEEECCCCE
VNGVLGSDLTYSDSVVPELDITYYFTKNIAAELILGVTPHDINGAGTITSLGQVGKVWLL
ECEEECCCCEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEE
PPTLTLQYHFTDFGPFKPYIGAGVNYTVFFNQDAKNPAFASVDVHDTWGLALQAGFDWMI
CCEEEEEEEECCCCCCCCHHCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCEEEE
DRHWGINVDVKKLFLEPSFTLQTVGGSYLTGGADLNPWIFGTGVTYRF
ECCCCCCEEEEEEEECCCEEEEECCCCEEECCCCCCCEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]