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The map label for this gene is 154245889

Identifier: 154245889

GI number: 154245889

Start: 2201745

End: 2203058

Strand: Reverse

Name: 154245889

Synonym: Xaut_1946

Alternate gene names: NA

Gene position: 2203058-2201745 (Counterclockwise)

Preceding gene: 154245896

Following gene: 154245888

Centisome position: 41.5

GC content: 70.85

Gene sequence:

>1314_bases
ATGAGCCGTGAGCGCGATTCCCTCCTCGATCCTGCCGGCACCACCGTCGCCGCGGCGCGTGCCGCACGCGGCCCAAGGCC
GGCCGGCCCCAAGGCCGCTGGACCCAAGGCTGCACCCAAGGCCAAGGCGGCGGCCCTCGCGGTGAACGAGCCGCGCGCCA
ATCGCATCCTCGGGCGCCTCGCGCAGGAAAAGGCCGCACCGCCCCCCGTGGTCCCCCCAGCTCTCGACGGAGAGGTCGGG
AGCGTGGTGGACGGGGAGCGCCGGCGCGGACGGGGCGCGGTCTCCAACGCCGCCGGCCGCTTCGAGCCGGCCGCCCGCAT
CCTGTTCGACGACGGCTGGCAGAGCCTGGAGGACCTGCCGCCCCTGCGCACGCAGGTGATGGAAGAGCGCGCACGCACGG
TCATCACCCGCAACCAGTCGCCGGATGTCGCCTTCGATCGCTCCATCAACGCCTATCGGGGCTGCGAGCACGGCTGCGTC
TATTGCTTCGCCCGGCCGACCCACGCCTATCACGGCCTGTCGGCGGGCCTCGATTTCGAGACCAAGCTGTTCGTGAAGCC
GGACGCGCCGGAACTGCTGGCGCGGGAGCTGTCCCAGGCGTCCTACCAGCCCCGCGTCATCGCCATGGGCACCAACACCG
ATCCCTATCAGCCCATCGAAAAGCGCTACGAGGTCACCCGCCGCCTGCTGGAGGTGCTCGCCGAATTCGGCCATCCGGTG
GGCATCGTCACCAAGTCGGGACTGGTGGCGCGCGACATCGACATCCTCGCCCCCATGGCCGAGAAGGGCCTCGTCAAGGT
GGCCATCTCCATCACCACCCTCGATCCGCATCTGGCCCGCACCATGGAGCCGCGGGCGGCGAGCCCCCATGTGCGGCTCG
GCACCATCCGCCGCCTCGCCGATGCGGGCATTCCCACTGCGGTGCTCACCGCCCCGCTCATTCCGGCGCTCAACGACATG
GAGGTGGAGCGCATCCTCGATGCCGCCAAGGCCGCCGGCGCCAGCGAGGCGGGCTATGTCATGCTGCGCCTGCCGCTGGA
GATCGCCGACCTGTTCCGCGAATGGCTGGTGACCCACTTCCCGGACAAGGCGCGGCACGTGCTCGGCCTGATCCGCCAGA
TGCACGGCGGAAAGGACTATGACTCCGCCTTCGGAAAGCGGATGCGGGGAGACGGCCCCTATGCCTGGACCGTGGGCCGC
CGCTTCGAGATCGCGGCACGGCGGCTCGGCCTCGCCGGGCGCGGGCTGAAGCTGACCACCGCCCATTTCCGCCGCCCCAA
GCCGGCCGGCGTGCAGCTCAGCCTGTTCGATTGA

Upstream 100 bases:

>100_bases
CATTGGAATCATCCGGCAACCGCCTGAACGCAATGGGAAAGGCCGCTCCGGAGCGTTAATGTTCTTGTTTCGTTCCGGTT
CGGGTGCTACCTTTTTTCCC

Downstream 100 bases:

>100_bases
AGAGCCCCATGGAGATGCCCATGCCGCCGGCACCCGCGCTTCGCCTGCATCTCGTCACCCTGGGGGTCGGCGACCTTGGC
CGCGCCATCGCCTTCTACAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSRERDSLLDPAGTTVAAARAARGPRPAGPKAAGPKAAPKAKAAALAVNEPRANRILGRLAQEKAAPPPVVPPALDGEVG
SVVDGERRRGRGAVSNAAGRFEPAARILFDDGWQSLEDLPPLRTQVMEERARTVITRNQSPDVAFDRSINAYRGCEHGCV
YCFARPTHAYHGLSAGLDFETKLFVKPDAPELLARELSQASYQPRVIAMGTNTDPYQPIEKRYEVTRRLLEVLAEFGHPV
GIVTKSGLVARDIDILAPMAEKGLVKVAISITTLDPHLARTMEPRAASPHVRLGTIRRLADAGIPTAVLTAPLIPALNDM
EVERILDAAKAAGASEAGYVMLRLPLEIADLFREWLVTHFPDKARHVLGLIRQMHGGKDYDSAFGKRMRGDGPYAWTVGR
RFEIAARRLGLAGRGLKLTTAHFRRPKPAGVQLSLFD

Sequences:

>Translated_437_residues
MSRERDSLLDPAGTTVAAARAARGPRPAGPKAAGPKAAPKAKAAALAVNEPRANRILGRLAQEKAAPPPVVPPALDGEVG
SVVDGERRRGRGAVSNAAGRFEPAARILFDDGWQSLEDLPPLRTQVMEERARTVITRNQSPDVAFDRSINAYRGCEHGCV
YCFARPTHAYHGLSAGLDFETKLFVKPDAPELLARELSQASYQPRVIAMGTNTDPYQPIEKRYEVTRRLLEVLAEFGHPV
GIVTKSGLVARDIDILAPMAEKGLVKVAISITTLDPHLARTMEPRAASPHVRLGTIRRLADAGIPTAVLTAPLIPALNDM
EVERILDAAKAAGASEAGYVMLRLPLEIADLFREWLVTHFPDKARHVLGLIRQMHGGKDYDSAFGKRMRGDGPYAWTVGR
RFEIAARRLGLAGRGLKLTTAHFRRPKPAGVQLSLFD
>Mature_436_residues
SRERDSLLDPAGTTVAAARAARGPRPAGPKAAGPKAAPKAKAAALAVNEPRANRILGRLAQEKAAPPPVVPPALDGEVGS
VVDGERRRGRGAVSNAAGRFEPAARILFDDGWQSLEDLPPLRTQVMEERARTVITRNQSPDVAFDRSINAYRGCEHGCVY
CFARPTHAYHGLSAGLDFETKLFVKPDAPELLARELSQASYQPRVIAMGTNTDPYQPIEKRYEVTRRLLEVLAEFGHPVG
IVTKSGLVARDIDILAPMAEKGLVKVAISITTLDPHLARTMEPRAASPHVRLGTIRRLADAGIPTAVLTAPLIPALNDME
VERILDAAKAAGASEAGYVMLRLPLEIADLFREWLVTHFPDKARHVLGLIRQMHGGKDYDSAFGKRMRGDGPYAWTVGRR
FEIAARRLGLAGRGLKLTTAHFRRPKPAGVQLSLFD

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 47422; Mature: 47291

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRERDSLLDPAGTTVAAARAARGPRPAGPKAAGPKAAPKAKAAALAVNEPRANRILGRL
CCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEECCCHHHHHHHHH
AQEKAAPPPVVPPALDGEVGSVVDGERRRGRGAVSNAAGRFEPAARILFDDGWQSLEDLP
HHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCHHHEEECCCHHHHHHCC
PLRTQVMEERARTVITRNQSPDVAFDRSINAYRGCEHGCVYCFARPTHAYHGLSAGLDFE
HHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHCCCCCCEEEEEECCCHHHCCCCCCCCCC
TKLFVKPDAPELLARELSQASYQPRVIAMGTNTDPYQPIEKRYEVTRRLLEVLAEFGHPV
EEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
GIVTKSGLVARDIDILAPMAEKGLVKVAISITTLDPHLARTMEPRAASPHVRLGTIRRLA
EEEECCCCEEHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHH
DAGIPTAVLTAPLIPALNDMEVERILDAAKAAGASEAGYVMLRLPLEIADLFREWLVTHF
HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHC
PDKARHVLGLIRQMHGGKDYDSAFGKRMRGDGPYAWTVGRRFEIAARRLGLAGRGLKLTT
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEH
AHFRRPKPAGVQLSLFD
HHCCCCCCCCEEEEECC
>Mature Secondary Structure 
SRERDSLLDPAGTTVAAARAARGPRPAGPKAAGPKAAPKAKAAALAVNEPRANRILGRL
CCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEEECCCHHHHHHHHH
AQEKAAPPPVVPPALDGEVGSVVDGERRRGRGAVSNAAGRFEPAARILFDDGWQSLEDLP
HHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCHHHEEECCCHHHHHHCC
PLRTQVMEERARTVITRNQSPDVAFDRSINAYRGCEHGCVYCFARPTHAYHGLSAGLDFE
HHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHCCCCCCEEEEEECCCHHHCCCCCCCCCC
TKLFVKPDAPELLARELSQASYQPRVIAMGTNTDPYQPIEKRYEVTRRLLEVLAEFGHPV
EEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
GIVTKSGLVARDIDILAPMAEKGLVKVAISITTLDPHLARTMEPRAASPHVRLGTIRRLA
EEEECCCCEEHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHH
DAGIPTAVLTAPLIPALNDMEVERILDAAKAAGASEAGYVMLRLPLEIADLFREWLVTHF
HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHC
PDKARHVLGLIRQMHGGKDYDSAFGKRMRGDGPYAWTVGRRFEIAARRLGLAGRGLKLTT
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEEEEH
AHFRRPKPAGVQLSLFD
HHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]